RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 ADGRB2O60241 1585 aa9.36□□□□□ -0.91
SMARCC1-202ENST00000425518 SSFA2P28290 1259 aa9.35□□□□□ -0.91
SMARCC1-202ENST00000425518 C16orf71Q8IYS4 520 aaPredicted RBP9.35□□□□□ -0.91
SMARCC1-202ENST00000425518 TRIM44Q96DX7 344 aaPredicted RBP9.35□□□□□ -0.91
SMARCC1-202ENST00000425518 COL3A1P02461 1466 aaPredicted RBP9.35□□□□□ -0.91
SMARCC1-202ENST00000425518 DDIT3P35638 169 aa9.35□□□□□ -0.91
SMARCC1-202ENST00000425518 RAB3GAP1Q15042 981 aa9.35□□□□□ -0.91
SMARCC1-202ENST00000425518 FRMPD1Q5SYB0 1578 aa9.35□□□□□ -0.91
SMARCC1-202ENST00000425518 PNPLA6Q8IY17 1366 aa9.35□□□□□ -0.91
SMARCC1-202ENST00000425518 GAS2L2Q8NHY3 880 aa9.35□□□□□ -0.91
SMARCC1-202ENST00000425518 IFT57Q9NWB7 429 aa9.35□□□□□ -0.91
SMARCC1-202ENST00000425518 CIZ1Q9ULV3 898 aaPredicted RBP9.35□□□□□ -0.91
SMARCC1-202ENST00000425518 CDC45O75419 566 aa9.35□□□□□ -0.91
SMARCC1-202ENST00000425518 ARHGAP45Q92619 1136 aa9.35□□□□□ -0.91
SMARCC1-202ENST00000425518 USP32Q8NFA0 1604 aa9.34□□□□□ -0.91
SMARCC1-202ENST00000425518 NCLP19338 710 aaKnown RBP9.34□□□□□ -0.91
SMARCC1-202ENST00000425518 API5Q9BZZ5 524 aaKnown RBP9.34□□□□□ -0.91
SMARCC1-202ENST00000425518 NCKAP5LQ9HCH0 1330 aa9.34□□□□□ -0.91
SMARCC1-202ENST00000425518 NEXMIFQ5QGS0 1516 aa9.34□□□□□ -0.91
SMARCC1-202ENST00000425518 ZC3H13Q5T200 1668 aaKnown RBP9.33□□□□□ -0.92
SMARCC1-202ENST00000425518 CAMSAP1Q5T5Y3 1602 aa9.33□□□□□ -0.92
SMARCC1-202ENST00000425518 GOLGA6L22H0YM25 854 aa9.33□□□□□ -0.92
SMARCC1-202ENST00000425518 IL13P35225 146 aa9.33□□□□□ -0.92
SMARCC1-202ENST00000425518 BRPF1P55201 1214 aaPredicted RBP9.33□□□□□ -0.92
SMARCC1-202ENST00000425518 KRT24Q2M2I5 525 aa9.33□□□□□ -0.92
SMARCC1-202ENST00000425518 SKOR2Q2VWA4 1001 aaPredicted RBP9.33□□□□□ -0.92
SMARCC1-202ENST00000425518 CD163L1Q9NR16 1453 aa9.33□□□□□ -0.92
SMARCC1-202ENST00000425518 CLCN1P35523 988 aa9.33□□□□□ -0.92
SMARCC1-202ENST00000425518 MLECQ14165 292 aa9.33□□□□□ -0.92
SMARCC1-202ENST00000425518 CFAP44Q96MT7 982 aa9.33□□□□□ -0.92
SMARCC1-202ENST00000425518 DDX49Q9Y6V7 483 aaKnown RBP9.33□□□□□ -0.92
SMARCC1-202ENST00000425518 KIF13AQ9H1H9 1805 aa9.33□□□□□ -0.92
SMARCC1-202ENST00000425518 GSPT1P15170 499 aaKnown RBP9.33□□□□□ -0.92
SMARCC1-202ENST00000425518 ESPNB1AK53 854 aa9.32□□□□□ -0.92
SMARCC1-202ENST00000425518 PLEKHM2Q8IWE5 1019 aa9.32□□□□□ -0.92
SMARCC1-202ENST00000425518 OTUD7AQ8TE49 926 aaPredicted RBP9.32□□□□□ -0.92
SMARCC1-202ENST00000425518 COG3Q96JB2 828 aa9.32□□□□□ -0.92
SMARCC1-202ENST00000425518 SOX12O15370 315 aa9.32□□□□□ -0.92
SMARCC1-202ENST00000425518 SMARCA5O60264 1052 aaPredicted RBP9.32□□□□□ -0.92
SMARCC1-202ENST00000425518 TXNDC2Q86VQ3 553 aa9.32□□□□□ -0.92
SMARCC1-202ENST00000425518 ZNF853P0CG23 659 aa9.32□□□□□ -0.92
SMARCC1-202ENST00000425518 LMOD3Q0VAK6 560 aa9.32□□□□□ -0.92
SMARCC1-202ENST00000425518 AEBP2Q6ZN18 517 aaPredicted RBP9.32□□□□□ -0.92
SMARCC1-202ENST00000425518 ARHGEF28Q8N1W1 1705 aaKnown RBP9.32□□□□□ -0.92
SMARCC1-202ENST00000425518 PTPRMP28827 1452 aa9.32□□□□□ -0.92
SMARCC1-202ENST00000425518 ABCC4O15439 1325 aa9.31□□□□□ -0.92
SMARCC1-202ENST00000425518 FAM135BQ49AJ0 1406 aa9.31□□□□□ -0.92
SMARCC1-202ENST00000425518 NCOA3Q9Y6Q9 1424 aa9.31□□□□□ -0.92
SMARCC1-202ENST00000425518 HECW2Q9P2P5 1572 aa9.31□□□□□ -0.92
SMARCC1-202ENST00000425518 ZFYVE9O95405 1425 aa9.31□□□□□ -0.92
SMARCC1-202ENST00000425518 NUTM2FA1L443 756 aa9.31□□□□□ -0.92
SMARCC1-202ENST00000425518 MCTP1Q6DN14 999 aa9.31□□□□□ -0.92
SMARCC1-202ENST00000425518 DCTPP1Q9H773 170 aa9.31□□□□□ -0.92
SMARCC1-202ENST00000425518 YEATS2Q9ULM3 1422 aa9.31□□□□□ -0.92
SMARCC1-202ENST00000425518 BAG4O95429 457 aaKnown RBP9.3□□□□□ -0.92
SMARCC1-202ENST00000425518 AEBP1Q8IUX7 1158 aa9.3□□□□□ -0.92
SMARCC1-202ENST00000425518 SULT6B1Q6IMI4 303 aa9.3□□□□□ -0.92
SMARCC1-202ENST00000425518 ISY1Q9ULR0 285 aaKnown RBP9.3□□□□□ -0.92
SMARCC1-202ENST00000425518 ERBB4Q15303 1308 aa9.3□□□□□ -0.92
SMARCC1-202ENST00000425518 LRRC7Q96NW7 1537 aa9.3□□□□□ -0.92
SMARCC1-202ENST00000425518 MCM10Q7L590 875 aa9.3□□□□□ -0.92
SMARCC1-202ENST00000425518 NUDT16Q96DE0 195 aaKnown RBP9.3□□□□□ -0.92
SMARCC1-202ENST00000425518 WASLO00401 505 aaPredicted RBP9.29□□□□□ -0.92
SMARCC1-202ENST00000425518 PTMSP20962 102 aa9.29□□□□□ -0.92
SMARCC1-202ENST00000425518 RABEP1Q15276 862 aa9.29□□□□□ -0.92
SMARCC1-202ENST00000425518 TTC22Q5TAA0 569 aa9.29□□□□□ -0.92
SMARCC1-202ENST00000425518 ANP32BQ92688 251 aaKnown RBP9.29□□□□□ -0.92
SMARCC1-202ENST00000425518 MIS18AQ9NYP9 233 aa9.29□□□□□ -0.92
SMARCC1-202ENST00000425518 MED14O60244 1454 aa9.29□□□□□ -0.92
SMARCC1-202ENST00000425518 SIGLEC1Q9BZZ2 1709 aa9.29□□□□□ -0.92
SMARCC1-202ENST00000425518 FOXD4L5Q5VV16 416 aaPredicted RBP9.29□□□□□ -0.92
SMARCC1-202ENST00000425518 SLC4A10Q6U841 1118 aa9.29□□□□□ -0.92
SMARCC1-202ENST00000425518 FOXD4L4Q8WXT5 416 aaPredicted RBP9.29□□□□□ -0.92
SMARCC1-202ENST00000425518 ARHGAP31Q2M1Z3 1444 aa9.28□□□□□ -0.92
SMARCC1-202ENST00000425518 SDSP20132 328 aa9.28□□□□□ -0.92
SMARCC1-202ENST00000425518 NASPP49321 788 aaPredicted RBP9.28□□□□□ -0.92
SMARCC1-202ENST00000425518 INTS3Q68E01 1043 aaKnown RBP9.28□□□□□ -0.92
SMARCC1-202ENST00000425518 USP26Q9BXU7 913 aa9.28□□□□□ -0.92
SMARCC1-202ENST00000425518 PIK3C2BO00750 1634 aa9.28□□□□□ -0.92
SMARCC1-202ENST00000425518 PTCH1Q13635 1447 aa9.28□□□□□ -0.92
SMARCC1-202ENST00000425518 PKP1Q13835 747 aa9.28□□□□□ -0.92
SMARCC1-202ENST00000425518 CASC1Q6TDU7 716 aa9.28□□□□□ -0.92
SMARCC1-202ENST00000425518 PIK3R4Q99570 1358 aa9.28□□□□□ -0.92
SMARCC1-202ENST00000425518 ARHGEF40Q8TER5 1519 aa9.28□□□□□ -0.92
SMARCC1-202ENST00000425518 CAVIN1Q6NZI2 390 aaKnown RBP9.28□□□□□ -0.92
SMARCC1-202ENST00000425518 ANKRD44Q8N8A2 993 aa9.28□□□□□ -0.92
SMARCC1-202ENST00000425518 MEIS3Q99687 375 aa9.28□□□□□ -0.92
SMARCC1-202ENST00000425518 CCDC61Q9Y6R9 512 aa9.27□□□□□ -0.92
SMARCC1-202ENST00000425518 SLC4A2P04920 1241 aa9.27□□□□□ -0.93
SMARCC1-202ENST00000425518 UBE2Q2Q8WVN8 375 aa9.27□□□□□ -0.93
SMARCC1-202ENST00000425518 NUCB2P80303 420 aa9.27□□□□□ -0.93
SMARCC1-202ENST00000425518 CEP85Q6P2H3 762 aa9.27□□□□□ -0.93
SMARCC1-202ENST00000425518 RPAP2Q8IXW5 612 aaPredicted RBP9.27□□□□□ -0.93
SMARCC1-202ENST00000425518 ZGPATQ8N5A5 531 aaKnown RBP9.27□□□□□ -0.93
SMARCC1-202ENST00000425518 PRPF40AO75400 957 aaKnown RBP9.26□□□□□ -0.93
SMARCC1-202ENST00000425518 KLHL40Q2TBA0 621 aa9.26□□□□□ -0.93
SMARCC1-202ENST00000425518 CHAMP1Q96JM3 812 aa9.26□□□□□ -0.93
SMARCC1-202ENST00000425518 F6X3S4 739 aa9.26□□□□□ -0.93
SMARCC1-202ENST00000425518 ST18O60284 1047 aa9.26□□□□□ -0.93
SMARCC1-202ENST00000425518 EIF4A2Q14240 407 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms