RNA–Protein interactions for RNA: ENST00000425184.5

RBM39-210, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 526 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-210ENST00000425184 ZIC2O95409 532 aaPredicted RBP8.43□□□□□ -1.06
RBM39-210ENST00000425184 CCDC116Q8IYX3 515 aa8.43□□□□□ -1.06
RBM39-210ENST00000425184 POTECB2RU33 542 aa8.42□□□□□ -1.06
RBM39-210ENST00000425184 GPR37L1O60883 481 aa8.42□□□□□ -1.06
RBM39-210ENST00000425184 NR1H3Q13133 447 aa8.42□□□□□ -1.06
RBM39-210ENST00000425184 ITPKCQ96DU7 683 aa8.42□□□□□ -1.06
RBM39-210ENST00000425184 GMPR2Q9P2T1 348 aaKnown RBP8.42□□□□□ -1.06
RBM39-210ENST00000425184 TBC1D2BQ9UPU7 963 aa8.42□□□□□ -1.06
RBM39-210ENST00000425184 EMILIN1Q9Y6C2 1016 aa8.42□□□□□ -1.06
RBM39-210ENST00000425184 DHX9Q08211 1270 aaKnown RBP8.41□□□□□ -1.06
RBM39-210ENST00000425184 MCM6Q14566 821 aa8.41□□□□□ -1.06
RBM39-210ENST00000425184 ZFAND3Q9H8U3 227 aa8.41□□□□□ -1.06
RBM39-210ENST00000425184 SENP2Q9HC62 589 aa8.41□□□□□ -1.06
RBM39-210ENST00000425184 ZNF330Q9Y3S2 320 aaPredicted RBP8.41□□□□□ -1.06
RBM39-210ENST00000425184 PCDHB9Q9Y5E1 797 aa8.41□□□□□ -1.06
RBM39-210ENST00000425184 BMP1P13497 986 aa8.4□□□□□ -1.06
RBM39-210ENST00000425184 ZNF592Q92610 1267 aa8.4□□□□□ -1.06
RBM39-210ENST00000425184 PGPEP1Q9NXJ5 209 aa8.4□□□□□ -1.06
RBM39-210ENST00000425184 C11orf95C9JLR9 678 aaPredicted RBP8.39□□□□□ -1.07
RBM39-210ENST00000425184 INTS6LQ5JSJ4 861 aaKnown RBP8.39□□□□□ -1.07
RBM39-210ENST00000425184 PPP1R26Q5T8A7 1209 aaPredicted RBP8.39□□□□□ -1.07
RBM39-210ENST00000425184 MCCD1P59942 119 aaPredicted RBP8.38□□□□□ -1.07
RBM39-210ENST00000425184 TRIM46Q7Z4K8 759 aa8.38□□□□□ -1.07
RBM39-210ENST00000425184 KIFC2Q96AC6 838 aa8.38□□□□□ -1.07
RBM39-210ENST00000425184 TRIM47Q96LD4 638 aa8.38□□□□□ -1.07
RBM39-210ENST00000425184 GDPD2Q9HCC8 539 aa8.38□□□□□ -1.07
RBM39-210ENST00000425184 ESPNB1AK53 854 aa8.37□□□□□ -1.07
RBM39-210ENST00000425184 RAB15P59190 212 aa8.37□□□□□ -1.07
RBM39-210ENST00000425184 SCARF1Q14162 830 aa8.37□□□□□ -1.07
RBM39-210ENST00000425184 MRPL14Q6P1L8 145 aaKnown RBP8.37□□□□□ -1.07
RBM39-210ENST00000425184 UPP2O95045 317 aa8.36□□□□□ -1.07
RBM39-210ENST00000425184 ABL2P42684 1182 aa8.36□□□□□ -1.07
RBM39-210ENST00000425184 FLIIQ13045 1269 aa8.36□□□□□ -1.07
RBM39-210ENST00000425184 SEPT12Q8IYM1 358 aa8.36□□□□□ -1.07
RBM39-210ENST00000425184 IRF5Q13568 498 aa8.35□□□□□ -1.07
RBM39-210ENST00000425184 MEIOBQ8N635 442 aa8.35□□□□□ -1.07
RBM39-210ENST00000425184 TRIM52Q96A61 297 aa8.35□□□□□ -1.07
RBM39-210ENST00000425184 ERVH48-1M5A8F1 160 aa8.34□□□□□ -1.07
RBM39-210ENST00000425184 GIGYF1O75420 1035 aaPredicted RBP8.34□□□□□ -1.07
RBM39-210ENST00000425184 SNRPBP14678 240 aaKnown RBP8.34□□□□□ -1.07
RBM39-210ENST00000425184 CCDC125Q86Z20 511 aa8.34□□□□□ -1.07
RBM39-210ENST00000425184 ZFP42Q96MM3 310 aa8.34□□□□□ -1.07
RBM39-210ENST00000425184 EIF4G2P78344 907 aaKnown RBP eCLIP8.33□□□□□ -1.08
RBM39-210ENST00000425184 RNF20Q5VTR2 975 aa8.33□□□□□ -1.08
RBM39-210ENST00000425184 LINC00528Q8N1L1 170 aa8.33□□□□□ -1.08
RBM39-210ENST00000425184 PURBQ96QR8 312 aaKnown RBP8.33□□□□□ -1.08
RBM39-210ENST00000425184 TSEN34Q9BSV6 310 aaKnown RBP8.33□□□□□ -1.08
RBM39-210ENST00000425184 COG6Q9Y2V7 657 aa8.33□□□□□ -1.08
RBM39-210ENST00000425184 BMP2P12643 396 aa8.32□□□□□ -1.08
RBM39-210ENST00000425184 CBLBQ13191 982 aa8.32□□□□□ -1.08
RBM39-210ENST00000425184 WASHC4Q2M389 1173 aa8.32□□□□□ -1.08
RBM39-210ENST00000425184 C6orf118Q5T5N4 469 aa8.32□□□□□ -1.08
RBM39-210ENST00000425184 Q6ZVU0 165 aa8.32□□□□□ -1.08
RBM39-210ENST00000425184 ZNF784Q8NCA9 323 aaPredicted RBP8.32□□□□□ -1.08
RBM39-210ENST00000425184 TMPRSS4Q9NRS4 437 aa8.32□□□□□ -1.08
RBM39-210ENST00000425184 RAD21O60216 631 aa8.31□□□□□ -1.08
RBM39-210ENST00000425184 VAC14Q08AM6 782 aa8.31□□□□□ -1.08
RBM39-210ENST00000425184 WWC1Q8IX03 1113 aa8.31□□□□□ -1.08
RBM39-210ENST00000425184 UBTFP17480 764 aaKnown RBP8.3□□□□□ -1.08
RBM39-210ENST00000425184 ZNF775Q96BV0 537 aaPredicted RBP8.29□□□□□ -1.08
RBM39-210ENST00000425184 CEP126Q9P2H0 1117 aa8.29□□□□□ -1.08
RBM39-210ENST00000425184 LILRA1O75019 489 aa8.28□□□□□ -1.08
RBM39-210ENST00000425184 POM121Q96HA1 1249 aa8.28□□□□□ -1.08
RBM39-210ENST00000425184 CYLDQ9NQC7 956 aa8.28□□□□□ -1.08
RBM39-210ENST00000425184 AGBL1Q96MI9 1066 aa8.27□□□□□ -1.09
RBM39-210ENST00000425184 PCDHB11Q9Y5F2 797 aa8.27□□□□□ -1.09
RBM39-210ENST00000425184 ADH1AP07327 375 aa8.26□□□□□ -1.09
RBM39-210ENST00000425184 SOX11P35716 441 aa8.26□□□□□ -1.09
RBM39-210ENST00000425184 RELBQ01201 579 aa8.26□□□□□ -1.09
RBM39-210ENST00000425184 SEMA3FQ13275 785 aa8.26□□□□□ -1.09
RBM39-210ENST00000425184 ESF1Q9H501 851 aaKnown RBP8.26□□□□□ -1.09
RBM39-210ENST00000425184 SPINT1O43278 529 aa8.25□□□□□ -1.09
RBM39-210ENST00000425184 MAN1A2O60476 641 aa8.25□□□□□ -1.09
RBM39-210ENST00000425184 ADD1P35611 737 aaKnown RBP8.25□□□□□ -1.09
RBM39-210ENST00000425184 ERVK-9P63128 1117 aa8.25□□□□□ -1.09
RBM39-210ENST00000425184 SLFNL1Q499Z3 407 aa8.25□□□□□ -1.09
RBM39-210ENST00000425184 CC2D2BQ6DHV5 1058 aa8.25□□□□□ -1.09
RBM39-210ENST00000425184 ZNF395Q9H8N7 513 aaPredicted RBP8.24□□□□□ -1.09
RBM39-210ENST00000425184 SOS2Q07890 1332 aaPredicted RBP8.24□□□□□ -1.09
RBM39-210ENST00000425184 TTLL8A6PVC2 850 aa8.23□□□□□ -1.09
RBM39-210ENST00000425184 PTGIRP43119 386 aa8.23□□□□□ -1.09
RBM39-210ENST00000425184 RNF135Q8IUD6 432 aa8.23□□□□□ -1.09
RBM39-210ENST00000425184 SOBPA7XYQ1 873 aa8.22□□□□□ -1.09
RBM39-210ENST00000425184 ATP5J2-PTCD1G3V325 749 aa8.22□□□□□ -1.09
RBM39-210ENST00000425184 CCDC85AQ96PX6 553 aaPredicted RBP8.22□□□□□ -1.09
RBM39-210ENST00000425184 INSM2Q96T92 566 aaPredicted RBP8.22□□□□□ -1.09
RBM39-210ENST00000425184 MYCP01106 439 aaPredicted RBP8.21□□□□□ -1.1
RBM39-210ENST00000425184 SCTRP47872 440 aa8.21□□□□□ -1.1
RBM39-210ENST00000425184 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.21□□□□□ -1.14e-22■□□□□ 8.9
RBM39-210ENST00000425184 CYP2U1Q7Z449 544 aa8.21□□□□□ -1.1
RBM39-210ENST00000425184 PHTF2Q8N3S3 785 aa8.21□□□□□ -1.1
RBM39-210ENST00000425184 KDF1Q8NAX2 398 aaPredicted RBP8.21□□□□□ -1.1
RBM39-210ENST00000425184 POLMQ9NP87 494 aaPredicted RBP8.21□□□□□ -1.1
RBM39-210ENST00000425184 DNMT3LQ9UJW3 386 aa8.21□□□□□ -1.1
RBM39-210ENST00000425184 DOLKQ9UPQ8 538 aa8.21□□□□□ -1.1
RBM39-210ENST00000425184 TERTO14746 1132 aaKnown RBP8.2□□□□□ -1.1
RBM39-210ENST00000425184 CTSOP43234 321 aaPredicted RBP8.2□□□□□ -1.1
RBM39-210ENST00000425184 TREML4Q6UXN2 200 aa8.2□□□□□ -1.1
RBM39-210ENST00000425184 NXF1Q9UBU9 619 aaKnown RBP8.2□□□□□ -1.1
RBM39-210ENST00000425184 FIGNL2A6NMB9 653 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms