RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 K7ELQ4 463 aaPredicted RBP8.23□□□□□ -1.09
CNOT4-205ENST00000423368 CAND2O75155 1236 aa8.23□□□□□ -1.09
CNOT4-205ENST00000423368 ZMYND10O75800 440 aa8.23□□□□□ -1.09
CNOT4-205ENST00000423368 NAIF1Q69YI7 327 aaPredicted RBP8.23□□□□□ -1.09
CNOT4-205ENST00000423368 LNPKQ9C0E8 428 aa8.23□□□□□ -1.09
CNOT4-205ENST00000423368 IRAK4Q9NWZ3 460 aa8.23□□□□□ -1.09
CNOT4-205ENST00000423368 GPBP1L1Q9HC44 474 aaPredicted RBP8.22□□□□□ -1.09
CNOT4-205ENST00000423368 DONSONQ9NYP3 566 aa8.22□□□□□ -1.09
CNOT4-205ENST00000423368 NLRP13Q86W25 1043 aa8.22□□□□□ -1.09
CNOT4-205ENST00000423368 SMC5Q8IY18 1101 aa8.22□□□□□ -1.09
CNOT4-205ENST00000423368 MCCP23508 829 aa8.21□□□□□ -1.09
CNOT4-205ENST00000423368 NINLQ9Y2I6 1382 aa8.21□□□□□ -1.09
CNOT4-205ENST00000423368 NCOA2Q15596 1464 aa8.21□□□□□ -1.09
CNOT4-205ENST00000423368 A0A1B0GUL7 405 aa8.21□□□□□ -1.1
CNOT4-205ENST00000423368 SMARCA5O60264 1052 aaPredicted RBP8.21□□□□□ -1.1
CNOT4-205ENST00000423368 TEX35Q5T0J7 233 aa8.21□□□□□ -1.1
CNOT4-205ENST00000423368 FOXR1Q6PIV2 292 aa8.21□□□□□ -1.1
CNOT4-205ENST00000423368 KCNF1Q9H3M0 494 aa8.21□□□□□ -1.1
CNOT4-205ENST00000423368 PDRG1Q9NUG6 133 aa8.21□□□□□ -1.1
CNOT4-205ENST00000423368 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.21□□□□□ -1.1
CNOT4-205ENST00000423368 ABCC9O60706 1549 aa8.21□□□□□ -1.1
CNOT4-205ENST00000423368 H0YHG0 523 aa8.21□□□□□ -1.1
CNOT4-205ENST00000423368 SARNPP82979 210 aaKnown RBP8.21□□□□□ -1.1
CNOT4-205ENST00000423368 MYOM3Q5VTT5 1437 aa8.21□□□□□ -1.1
CNOT4-205ENST00000423368 CCDC91Q7Z6B0 441 aa8.21□□□□□ -1.1
CNOT4-205ENST00000423368 CECR2Q9BXF3 1484 aa8.2□□□□□ -1.1
CNOT4-205ENST00000423368 SEC31AO94979 1220 aaKnown RBP8.2□□□□□ -1.1
CNOT4-205ENST00000423368 RLBP1P12271 317 aa8.2□□□□□ -1.1
CNOT4-205ENST00000423368 ATP2B1P20020 1258 aa8.2□□□□□ -1.1
CNOT4-205ENST00000423368 ATP6V1AP38606 617 aa8.2□□□□□ -1.1
CNOT4-205ENST00000423368 ERCC6LQ2NKX8 1250 aa8.2□□□□□ -1.1
CNOT4-205ENST00000423368 KIRREL3Q8IZU9 778 aa8.2□□□□□ -1.1
CNOT4-205ENST00000423368 KIAA1524Q8TCG1 905 aa8.2□□□□□ -1.1
CNOT4-205ENST00000423368 CTIFO43310 598 aaKnown RBP8.2□□□□□ -1.1
CNOT4-205ENST00000423368 ISM2Q6H9L7 571 aa8.2□□□□□ -1.1
CNOT4-205ENST00000423368 CUX2O14529 1486 aa8.2□□□□□ -1.1
CNOT4-205ENST00000423368 SEMA3EO15041 775 aa8.2□□□□□ -1.1
CNOT4-205ENST00000423368 GADD45BO75293 160 aaPredicted RBP8.2□□□□□ -1.1
CNOT4-205ENST00000423368 TSGA10IPQ3SY00 556 aa8.2□□□□□ -1.1
CNOT4-205ENST00000423368 ZNF397Q8NF99 534 aaPredicted RBP8.2□□□□□ -1.1
CNOT4-205ENST00000423368 NRBP1Q9UHY1 535 aa8.2□□□□□ -1.1
CNOT4-205ENST00000423368 G3BP2Q9UN86 482 aaKnown RBP8.2□□□□□ -1.1
CNOT4-205ENST00000423368 APAF1O14727 1248 aa8.19□□□□□ -1.1
CNOT4-205ENST00000423368 DDIT3P35638 169 aa8.19□□□□□ -1.1
CNOT4-205ENST00000423368 ATP2B2Q01814 1243 aa8.19□□□□□ -1.1
CNOT4-205ENST00000423368 EPC1Q9H2F5 836 aa8.19□□□□□ -1.1
CNOT4-205ENST00000423368 RABEP2Q9H5N1 569 aa8.19□□□□□ -1.1
CNOT4-205ENST00000423368 PRDM16Q9HAZ2 1276 aa8.19□□□□□ -1.1
CNOT4-205ENST00000423368 RAI14Q9P0K7 980 aa8.19□□□□□ -1.1
CNOT4-205ENST00000423368 RRP7AQ9Y3A4 280 aaKnown RBP8.19□□□□□ -1.1
CNOT4-205ENST00000423368 AQRO60306 1485 aaKnown RBP eCLIP8.19□□□□□ -1.12e-7■■■■□ 23.2
CNOT4-205ENST00000423368 ST20-MTHFSA0A0A6YYL1 179 aa8.19□□□□□ -1.1
CNOT4-205ENST00000423368 CCDC189A1A4V9 331 aa8.19□□□□□ -1.1
CNOT4-205ENST00000423368 CTR9Q6PD62 1173 aa8.19□□□□□ -1.1
CNOT4-205ENST00000423368 CCDC186Q7Z3E2 898 aa8.19□□□□□ -1.1
CNOT4-205ENST00000423368 MICALL1Q8N3F8 863 aa8.19□□□□□ -1.1
CNOT4-205ENST00000423368 KIF16BQ96L93 1317 aa8.19□□□□□ -1.1
CNOT4-205ENST00000423368 SRLQ86TD4 932 aa8.18□□□□□ -1.1
CNOT4-205ENST00000423368 WDR70Q9NW82 654 aa8.18□□□□□ -1.1
CNOT4-205ENST00000423368 SKAP2O75563 359 aaPredicted RBP8.18□□□□□ -1.1
CNOT4-205ENST00000423368 DNAAF4Q8WXU2 420 aa8.18□□□□□ -1.1
CNOT4-205ENST00000423368 MIS18AQ9NYP9 233 aa8.18□□□□□ -1.1
CNOT4-205ENST00000423368 IPO8O15397 1037 aaKnown RBP8.18□□□□□ -1.1
CNOT4-205ENST00000423368 CARD11Q9BXL7 1154 aa8.18□□□□□ -1.1
CNOT4-205ENST00000423368 NOM1Q5C9Z4 860 aaKnown RBP8.17□□□□□ -1.1
CNOT4-205ENST00000423368 GIMAP6Q6P9H5 292 aa8.17□□□□□ -1.1
CNOT4-205ENST00000423368 ARAP1Q96P48 1450 aa8.17□□□□□ -1.1
CNOT4-205ENST00000423368 TESPA1A2RU30 521 aaPredicted RBP8.17□□□□□ -1.1
CNOT4-205ENST00000423368 APBB1O00213 710 aa8.17□□□□□ -1.1
CNOT4-205ENST00000423368 PHACTR2O75167 634 aa8.17□□□□□ -1.1
CNOT4-205ENST00000423368 PAX7P23759 505 aa8.17□□□□□ -1.1
CNOT4-205ENST00000423368 PEX19P40855 299 aa8.17□□□□□ -1.1
CNOT4-205ENST00000423368 CCT2P78371 535 aaKnown RBP8.17□□□□□ -1.1
CNOT4-205ENST00000423368 MEX3CQ5U5Q3 659 aaKnown RBP8.17□□□□□ -1.1
CNOT4-205ENST00000423368 LRRN4CLQ8ND94 238 aa8.17□□□□□ -1.1
CNOT4-205ENST00000423368 BORCS6Q96GS4 357 aa8.17□□□□□ -1.1
CNOT4-205ENST00000423368 RWDD1Q9H446 243 aaPredicted RBP8.17□□□□□ -1.1
CNOT4-205ENST00000423368 BRMS1Q9HCU9 246 aa8.17□□□□□ -1.1
CNOT4-205ENST00000423368 CWC15Q9P013 229 aaKnown RBP8.17□□□□□ -1.1
CNOT4-205ENST00000423368 PLEKHH1Q9ULM0 1364 aa8.17□□□□□ -1.1
CNOT4-205ENST00000423368 GPS2Q13227 327 aa8.16□□□□□ -1.1
CNOT4-205ENST00000423368 TXLNBQ8N3L3 684 aa8.16□□□□□ -1.1
CNOT4-205ENST00000423368 THOC1Q96FV9 657 aaKnown RBP8.16□□□□□ -1.1
CNOT4-205ENST00000423368 JPH2Q9BR39 696 aaPredicted RBP8.16□□□□□ -1.1
CNOT4-205ENST00000423368 SPTLC3Q9NUV7 552 aa8.16□□□□□ -1.1
CNOT4-205ENST00000423368 SSUH2Q9Y2M2 353 aa8.16□□□□□ -1.1
CNOT4-205ENST00000423368 LRPPRCP42704 1394 aaKnown RBP8.16□□□□□ -1.1
CNOT4-205ENST00000423368 AP5Z1O43299 807 aa8.16□□□□□ -1.1
CNOT4-205ENST00000423368 REC8O95072 547 aa8.16□□□□□ -1.1
CNOT4-205ENST00000423368 MKRN3Q13064 507 aaKnown RBP8.16□□□□□ -1.1
CNOT4-205ENST00000423368 NBPF20Q3BBV1 942 aa8.16□□□□□ -1.1
CNOT4-205ENST00000423368 MRVI1Q9Y6F6 885 aa8.16□□□□□ -1.1
CNOT4-205ENST00000423368 USP27XA6NNY8 438 aa8.16□□□□□ -1.1
CNOT4-205ENST00000423368 SMTNL1A8MU46 457 aa8.16□□□□□ -1.1
CNOT4-205ENST00000423368 CLSTN1O94985 981 aa8.16□□□□□ -1.1
CNOT4-205ENST00000423368 SSR1P43307 286 aaKnown RBP8.16□□□□□ -1.1
CNOT4-205ENST00000423368 CEP135Q66GS9 1140 aa8.16□□□□□ -1.1
CNOT4-205ENST00000423368 ARMCX6Q7L4S7 300 aa8.16□□□□□ -1.1
CNOT4-205ENST00000423368 PMFBP1Q8TBY8 1022 aa8.16□□□□□ -1.1
CNOT4-205ENST00000423368 STK24Q9Y6E0 443 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms