RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 COL18A1P39060 1754 aa25.26■■□□□ 1.63
UBXN11-208ENST00000421827 THRAP3Q9Y2W1 955 aaKnown RBP25.25■■□□□ 1.63
UBXN11-208ENST00000421827 USP54Q70EL1 1684 aa25.25■■□□□ 1.63
UBXN11-208ENST00000421827 CRB1P82279 1406 aa25.24■■□□□ 1.63
UBXN11-208ENST00000421827 ANKRD36BQ8N2N9 1353 aa25.23■■□□□ 1.63
UBXN11-208ENST00000421827 SF3B2Q13435 895 aaKnown RBP25.21■■□□□ 1.63
UBXN11-208ENST00000421827 FAM182BQ5T319 152 aa25.21■■□□□ 1.63
UBXN11-208ENST00000421827 TOM1L2Q6ZVM7 507 aa25.21■■□□□ 1.63
UBXN11-208ENST00000421827 WDR17Q8IZU2 1322 aa25.2■■□□□ 1.62
UBXN11-208ENST00000421827 OVOS2A0A0J9YW53 1432 aa25.2■■□□□ 1.62
UBXN11-208ENST00000421827 OVOS2Q6IE36 1432 aa25.2■■□□□ 1.62
UBXN11-208ENST00000421827 ABCC6O95255 1503 aa25.18■■□□□ 1.62
UBXN11-208ENST00000421827 PDE3BQ13370 1112 aa25.17■■□□□ 1.62
UBXN11-208ENST00000421827 CSB-PGBD3P0DP91 1061 aa25.16■■□□□ 1.62
UBXN11-208ENST00000421827 COG3Q96JB2 828 aa25.16■■□□□ 1.62
UBXN11-208ENST00000421827 RGPD5Q99666 1765 aa25.16■■□□□ 1.62
UBXN11-208ENST00000421827 EIF4G2P78344 907 aaKnown RBP eCLIP25.15■■□□□ 1.62
UBXN11-208ENST00000421827 DEFB132Q7Z7B7 95 aa25.15■■□□□ 1.62
UBXN11-208ENST00000421827 FAM196AQ6ZSG2 479 aa25.14■■□□□ 1.62
UBXN11-208ENST00000421827 CARD10Q9BWT7 1032 aa25.13■■□□□ 1.61
UBXN11-208ENST00000421827 HSPA5P11021 654 aaKnown RBP25.12■■□□□ 1.61
UBXN11-208ENST00000421827 PARP4Q9UKK3 1724 aaKnown RBP25.12■■□□□ 1.61
UBXN11-208ENST00000421827 LTN1O94822 1766 aa25.11■■□□□ 1.61
UBXN11-208ENST00000421827 FYB1O15117 783 aa25.1■■□□□ 1.61
UBXN11-208ENST00000421827 BAG6P46379 1132 aa25.1■■□□□ 1.61
UBXN11-208ENST00000421827 CDCA7Q9BWT1 371 aaPredicted RBP25.1■■□□□ 1.61
UBXN11-208ENST00000421827 MYOM1P52179 1685 aa25.09■■□□□ 1.61
UBXN11-208ENST00000421827 ERBB3P21860 1342 aa25.09■■□□□ 1.61
UBXN11-208ENST00000421827 DDB1Q16531 1140 aa25.08■■□□□ 1.61
UBXN11-208ENST00000421827 GGNBP2Q9H3C7 697 aa25.08■■□□□ 1.61
UBXN11-208ENST00000421827 RGPD1P0DJD0 1748 aa25.08■■□□□ 1.61
UBXN11-208ENST00000421827 CCDC7Q96M83 1385 aa25.07■■□□□ 1.6
UBXN11-208ENST00000421827 ANKRD24Q8TF21 1146 aa25.07■■□□□ 1.6
UBXN11-208ENST00000421827 IP6K1Q92551 441 aa25.07■■□□□ 1.6
UBXN11-208ENST00000421827 TRIM37O94972 964 aa25.06■■□□□ 1.6
UBXN11-208ENST00000421827 POLR3GLQ9BT43 218 aa25.06■■□□□ 1.6
UBXN11-208ENST00000421827 CARD14Q9BXL6 1004 aa25.06■■□□□ 1.6
UBXN11-208ENST00000421827 NLRP2Q9NX02 1062 aa25.06■■□□□ 1.6
UBXN11-208ENST00000421827 LRRC37A3O60309 1634 aa25.04■■□□□ 1.6
UBXN11-208ENST00000421827 C11orf95C9JLR9 678 aaPredicted RBP25.04■■□□□ 1.6
UBXN11-208ENST00000421827 FBLN1P23142 703 aa25.04■■□□□ 1.6
UBXN11-208ENST00000421827 MAP3K19Q56UN5 1328 aa25.04■■□□□ 1.6
UBXN11-208ENST00000421827 DISP2A7MBM2 1401 aa25.03■■□□□ 1.6
UBXN11-208ENST00000421827 NSD3Q9BZ95 1437 aa25.03■■□□□ 1.6
UBXN11-208ENST00000421827 WNK3Q9BYP7 1800 aa25.03■■□□□ 1.6
UBXN11-208ENST00000421827 AMPHP49418 695 aa25.02■■□□□ 1.6
UBXN11-208ENST00000421827 EN1Q05925 392 aaPredicted RBP25.02■■□□□ 1.6
UBXN11-208ENST00000421827 OVOS2A0A0G2JMS6 1433 aa25.02■■□□□ 1.6
UBXN11-208ENST00000421827 TNS1Q9HBL0 1735 aaKnown RBP25.01■■□□□ 1.59
UBXN11-208ENST00000421827 HOXC9P31274 260 aa25■■□□□ 1.59
UBXN11-208ENST00000421827 KIF20BQ96Q89 1820 aa25■■□□□ 1.59
UBXN11-208ENST00000421827 EXOC5O00471 708 aa24.99■■□□□ 1.59
UBXN11-208ENST00000421827 APBA3O96018 575 aa24.99■■□□□ 1.59
UBXN11-208ENST00000421827 RRS1Q15050 365 aaKnown RBP24.99■■□□□ 1.59
UBXN11-208ENST00000421827 LTV1Q96GA3 475 aaPredicted RBP24.99■■□□□ 1.59
UBXN11-208ENST00000421827 MARCH10Q8NA82 808 aaPredicted RBP24.98■■□□□ 1.59
UBXN11-208ENST00000421827 RTL1A6NKG5 1358 aa24.97■■□□□ 1.59
UBXN11-208ENST00000421827 PEAK1Q9H792 1746 aa24.97■■□□□ 1.59
UBXN11-208ENST00000421827 IL2RBP14784 551 aa24.96■■□□□ 1.59
UBXN11-208ENST00000421827 CGNL1Q0VF96 1302 aa24.95■■□□□ 1.58
UBXN11-208ENST00000421827 EZH2Q15910 746 aaKnown RBP24.95■■□□□ 1.58
UBXN11-208ENST00000421827 CAMKK2Q96RR4 588 aa24.95■■□□□ 1.58
UBXN11-208ENST00000421827 TNS2Q63HR2 1409 aa24.94■■□□□ 1.58
UBXN11-208ENST00000421827 BCL9O00512 1426 aa24.93■■□□□ 1.58
UBXN11-208ENST00000421827 FAM208AQ9UK61 1670 aaKnown RBP24.92■■□□□ 1.58
UBXN11-208ENST00000421827 PARD3Q8TEW0 1356 aa24.92■■□□□ 1.58
UBXN11-208ENST00000421827 PANK3Q9H999 370 aa24.91■■□□□ 1.58
UBXN11-208ENST00000421827 KIF24Q5T7B8 1368 aa24.9■■□□□ 1.58
UBXN11-208ENST00000421827 BCL11BQ9C0K0 894 aaPredicted RBP24.89■■□□□ 1.58
UBXN11-208ENST00000421827 FLT4P35916 1363 aa24.89■■□□□ 1.57
UBXN11-208ENST00000421827 SBF2Q86WG5 1849 aa24.89■■□□□ 1.57
UBXN11-208ENST00000421827 HSP90AB2PQ58FF8 381 aa24.88■■□□□ 1.57
UBXN11-208ENST00000421827 SRCAPQ6ZRS2 3230 aa24.88■■□□□ 1.57
UBXN11-208ENST00000421827 SMG6Q86US8 1419 aaKnown RBP24.87■■□□□ 1.57
UBXN11-208ENST00000421827 EMILIN1Q9Y6C2 1016 aa24.87■■□□□ 1.57
UBXN11-208ENST00000421827 INSRP06213 1382 aa24.87■■□□□ 1.57
UBXN11-208ENST00000421827 NBPF6Q5VWK0 638 aa24.85■■□□□ 1.57
UBXN11-208ENST00000421827 PTF1AQ7RTS3 328 aa24.85■■□□□ 1.57
UBXN11-208ENST00000421827 NBPF4Q96M43 638 aa24.85■■□□□ 1.57
UBXN11-208ENST00000421827 PSDA5PKW4 1024 aaPredicted RBP24.84■■□□□ 1.57
UBXN11-208ENST00000421827 RGPD2P0DJD1 1756 aa24.83■■□□□ 1.57
UBXN11-208ENST00000421827 PLSCR1O15162 318 aa24.83■■□□□ 1.57
UBXN11-208ENST00000421827 KIF7Q2M1P5 1343 aa24.83■■□□□ 1.56
UBXN11-208ENST00000421827 PPM1GO15355 546 aaPredicted RBP24.82■■□□□ 1.56
UBXN11-208ENST00000421827 RREB1Q92766 1687 aa24.81■■□□□ 1.56
UBXN11-208ENST00000421827 USHBP1Q8N6Y0 703 aa24.81■■□□□ 1.56
UBXN11-208ENST00000421827 R3HDM1Q15032 1099 aaKnown RBP24.8■■□□□ 1.56
UBXN11-208ENST00000421827 NSD2O96028 1365 aa24.8■■□□□ 1.56
UBXN11-208ENST00000421827 ANKRD26Q9UPS8 1709 aa24.79■■□□□ 1.56
UBXN11-208ENST00000421827 KCNQ2O43526 872 aa24.79■■□□□ 1.56
UBXN11-208ENST00000421827 TNNT2P45379 298 aaPredicted RBP24.79■■□□□ 1.56
UBXN11-208ENST00000421827 DDX54Q8TDD1 881 aaKnown RBP24.79■■□□□ 1.56
UBXN11-208ENST00000421827 ACSBG1Q96GR2 724 aa24.79■■□□□ 1.56
UBXN11-208ENST00000421827 POLKQ9UBT6 870 aa24.79■■□□□ 1.56
UBXN11-208ENST00000421827 WASHC2AQ641Q2 1341 aa24.79■■□□□ 1.56
UBXN11-208ENST00000421827 MEGF6O75095 1541 aa24.78■■□□□ 1.56
UBXN11-208ENST00000421827 ZCRB1Q8TBF4 217 aaKnown RBP24.78■■□□□ 1.56
UBXN11-208ENST00000421827 KNSTRNQ9Y448 316 aa24.78■■□□□ 1.56
UBXN11-208ENST00000421827 NBPF14Q5TI25 921 aa24.77■■□□□ 1.56
UBXN11-208ENST00000421827 RAPGEF4Q8WZA2 1011 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms