RNA–Protein interactions for RNA: ENST00000420665.5

LRRFIP1-205, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 3

Gene LRRFIP1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-205ENST00000420665 FAM98CQ17RN3 349 aaKnown RBP33.28■■■□□ 2.92
LRRFIP1-205ENST00000420665 LARP1Q6PKG0 1096 aaKnown RBP33.28■■■□□ 2.92
LRRFIP1-205ENST00000420665 SEPT12Q8IYM1 358 aa33.27■■■□□ 2.92
LRRFIP1-205ENST00000420665 GGNBP2Q9H3C7 697 aa33.27■■■□□ 2.92
LRRFIP1-205ENST00000420665 AXIN2Q9Y2T1 843 aa33.27■■■□□ 2.92
LRRFIP1-205ENST00000420665 ONECUT3O60422 494 aaPredicted RBP33.26■■■□□ 2.91
LRRFIP1-205ENST00000420665 KIF7Q2M1P5 1343 aa33.26■■■□□ 2.91
LRRFIP1-205ENST00000420665 A0A0G2JS52 829 aa33.25■■■□□ 2.91
LRRFIP1-205ENST00000420665 MYT1Q01538 1121 aa33.25■■■□□ 2.91
LRRFIP1-205ENST00000420665 USP35Q9P2H5 1018 aa33.24■■■□□ 2.91
LRRFIP1-205ENST00000420665 RGPD5Q99666 1765 aa33.24■■■□□ 2.91
LRRFIP1-205ENST00000420665 THSD7AQ9UPZ6 1657 aa33.23■■■□□ 2.91
LRRFIP1-205ENST00000420665 CRB1P82279 1406 aa33.23■■■□□ 2.91
LRRFIP1-205ENST00000420665 BRWD3Q6RI45 1802 aa33.23■■■□□ 2.91
LRRFIP1-205ENST00000420665 CGNL1Q0VF96 1302 aa33.2■■■□□ 2.91
LRRFIP1-205ENST00000420665 PANK3Q9H999 370 aa33.19■■■□□ 2.9
LRRFIP1-205ENST00000420665 WDR17Q8IZU2 1322 aa33.19■■■□□ 2.9
LRRFIP1-205ENST00000420665 TCP11L2Q8N4U5 519 aa33.17■■■□□ 2.9
LRRFIP1-205ENST00000420665 FBLN1P23142 703 aa33.16■■■□□ 2.9
LRRFIP1-205ENST00000420665 TOM1L2Q6ZVM7 507 aa33.16■■■□□ 2.9
LRRFIP1-205ENST00000420665 UPF1Q92900 1129 aaKnown RBP eCLIP33.16■■■□□ 2.9
LRRFIP1-205ENST00000420665 CSB-PGBD3P0DP91 1061 aa33.15■■■□□ 2.9
LRRFIP1-205ENST00000420665 MAP3K19Q56UN5 1328 aa33.15■■■□□ 2.9
LRRFIP1-205ENST00000420665 BARGINQ6ZT62 677 aa33.15■■■□□ 2.9
LRRFIP1-205ENST00000420665 BLMP54132 1417 aaPredicted RBP33.13■■■□□ 2.89
LRRFIP1-205ENST00000420665 KRT27Q7Z3Y8 459 aa33.13■■■□□ 2.89
LRRFIP1-205ENST00000420665 THRAP3Q9Y2W1 955 aaKnown RBP33.13■■■□□ 2.89
LRRFIP1-205ENST00000420665 ERBB3P21860 1342 aa33.12■■■□□ 2.89
LRRFIP1-205ENST00000420665 CCDC7Q96M83 1385 aa33.11■■■□□ 2.89
LRRFIP1-205ENST00000420665 RRS1Q15050 365 aaKnown RBP33.1■■■□□ 2.89
LRRFIP1-205ENST00000420665 IP6K1Q92551 441 aa33.1■■■□□ 2.89
LRRFIP1-205ENST00000420665 ANKRD26Q9UPS8 1709 aa33.1■■■□□ 2.89
LRRFIP1-205ENST00000420665 RTL1A6NKG5 1358 aa33.09■■■□□ 2.89
LRRFIP1-205ENST00000420665 WASHC2AQ641Q2 1341 aa33.08■■■□□ 2.89
LRRFIP1-205ENST00000420665 AMPHP49418 695 aa33.08■■■□□ 2.89
LRRFIP1-205ENST00000420665 WNK3Q9BYP7 1800 aa33.07■■■□□ 2.89
LRRFIP1-205ENST00000420665 ANKRD24Q8TF21 1146 aa33.07■■■□□ 2.88
LRRFIP1-205ENST00000420665 PARP4Q9UKK3 1724 aaKnown RBP33.06■■■□□ 2.88
LRRFIP1-205ENST00000420665 HOXC9P31274 260 aa33.06■■■□□ 2.88
LRRFIP1-205ENST00000420665 CARD10Q9BWT7 1032 aa33.06■■■□□ 2.88
LRRFIP1-205ENST00000420665 NSD2O96028 1365 aa33.04■■■□□ 2.88
LRRFIP1-205ENST00000420665 PEAK1Q9H792 1746 aa33.03■■■□□ 2.88
LRRFIP1-205ENST00000420665 FAM208AQ9UK61 1670 aaKnown RBP33.02■■■□□ 2.88
LRRFIP1-205ENST00000420665 NLRP2Q9NX02 1062 aa33.02■■■□□ 2.88
LRRFIP1-205ENST00000420665 KNSTRNQ9Y448 316 aa33.02■■■□□ 2.88
LRRFIP1-205ENST00000420665 LRRC37A3O60309 1634 aa33.02■■■□□ 2.88
LRRFIP1-205ENST00000420665 LTV1Q96GA3 475 aaPredicted RBP33■■■□□ 2.87
LRRFIP1-205ENST00000420665 FLT4P35916 1363 aa32.99■■■□□ 2.87
LRRFIP1-205ENST00000420665 FAM182BQ5T319 152 aa32.99■■■□□ 2.87
LRRFIP1-205ENST00000420665 DISP2A7MBM2 1401 aa32.99■■■□□ 2.87
LRRFIP1-205ENST00000420665 EP400Q96L91 3159 aa32.99■■■□□ 2.87
LRRFIP1-205ENST00000420665 KIF24Q5T7B8 1368 aa32.98■■■□□ 2.87
LRRFIP1-205ENST00000420665 EMILIN1Q9Y6C2 1016 aa32.98■■■□□ 2.87
LRRFIP1-205ENST00000420665 PDE3BQ13370 1112 aa32.96■■■□□ 2.87
LRRFIP1-205ENST00000420665 CDCA7Q9BWT1 371 aaPredicted RBP32.96■■■□□ 2.87
LRRFIP1-205ENST00000420665 TNNT2P45379 298 aaPredicted RBP32.95■■■□□ 2.87
LRRFIP1-205ENST00000420665 INSRP06213 1382 aa32.94■■■□□ 2.86
LRRFIP1-205ENST00000420665 SMG6Q86US8 1419 aaKnown RBP32.94■■■□□ 2.86
LRRFIP1-205ENST00000420665 PPM1GO15355 546 aaPredicted RBP32.92■■■□□ 2.86
LRRFIP1-205ENST00000420665 DDB1Q16531 1140 aa32.92■■■□□ 2.86
LRRFIP1-205ENST00000420665 HSP90AB2PQ58FF8 381 aa32.92■■■□□ 2.86
LRRFIP1-205ENST00000420665 AMER1Q5JTC6 1135 aaPredicted RBP32.92■■■□□ 2.86
LRRFIP1-205ENST00000420665 CCDC125Q86Z20 511 aa32.91■■■□□ 2.86
LRRFIP1-205ENST00000420665 PER1O15534 1290 aaPredicted RBP32.9■■■□□ 2.86
LRRFIP1-205ENST00000420665 MORC1Q86VD1 984 aa32.9■■■□□ 2.86
LRRFIP1-205ENST00000420665 MAP2P11137 1827 aaKnown RBP32.9■■■□□ 2.86
LRRFIP1-205ENST00000420665 RGPD2P0DJD1 1756 aa32.89■■■□□ 2.86
LRRFIP1-205ENST00000420665 POLKQ9UBT6 870 aa32.89■■■□□ 2.86
LRRFIP1-205ENST00000420665 TNS2Q63HR2 1409 aa32.87■■■□□ 2.85
LRRFIP1-205ENST00000420665 IL2RBP14784 551 aa32.87■■■□□ 2.85
LRRFIP1-205ENST00000420665 FAM196AQ6ZSG2 479 aa32.87■■■□□ 2.85
LRRFIP1-205ENST00000420665 RGPD1P0DJD0 1748 aa32.85■■■□□ 2.85
LRRFIP1-205ENST00000420665 OVOS2A0A0G2JMS6 1433 aa32.85■■■□□ 2.85
LRRFIP1-205ENST00000420665 SF3B2Q13435 895 aaKnown RBP32.83■■■□□ 2.85
LRRFIP1-205ENST00000420665 ZEB1P37275 1124 aaPredicted RBP32.82■■■□□ 2.84
LRRFIP1-205ENST00000420665 NBPF6Q5VWK0 638 aa32.82■■■□□ 2.84
LRRFIP1-205ENST00000420665 NBPF4Q96M43 638 aa32.82■■■□□ 2.84
LRRFIP1-205ENST00000420665 EXOC5O00471 708 aa32.81■■■□□ 2.84
LRRFIP1-205ENST00000420665 TNS1Q9HBL0 1735 aaKnown RBP32.8■■■□□ 2.84
LRRFIP1-205ENST00000420665 CC2D1BQ5T0F9 858 aaKnown RBP32.8■■■□□ 2.84
LRRFIP1-205ENST00000420665 USHBP1Q8N6Y0 703 aa32.8■■■□□ 2.84
LRRFIP1-205ENST00000420665 MARCH10Q8NA82 808 aaPredicted RBP32.79■■■□□ 2.84
LRRFIP1-205ENST00000420665 NPC1L1Q9UHC9 1359 aa32.79■■■□□ 2.84
LRRFIP1-205ENST00000420665 MEGF6O75095 1541 aa32.78■■■□□ 2.84
LRRFIP1-205ENST00000420665 TRIM37O94972 964 aa32.77■■■□□ 2.84
LRRFIP1-205ENST00000420665 DEFB132Q7Z7B7 95 aa32.75■■■□□ 2.83
LRRFIP1-205ENST00000420665 CNGB1Q14028 1251 aaPredicted RBP32.73■■■□□ 2.83
LRRFIP1-205ENST00000420665 BCL9O00512 1426 aa32.72■■■□□ 2.83
LRRFIP1-205ENST00000420665 NCAPD2Q15021 1401 aa32.72■■■□□ 2.83
LRRFIP1-205ENST00000420665 BAG6P46379 1132 aa32.71■■■□□ 2.83
LRRFIP1-205ENST00000420665 EIF4A2Q14240 407 aaKnown RBP32.71■■■□□ 2.83
LRRFIP1-205ENST00000420665 RAPGEF4Q8WZA2 1011 aa32.7■■■□□ 2.83
LRRFIP1-205ENST00000420665 SBF2Q86WG5 1849 aa32.69■■■□□ 2.82
LRRFIP1-205ENST00000420665 EYA1Q99502 592 aa32.68■■■□□ 2.82
LRRFIP1-205ENST00000420665 SHANK3Q9BYB0 1731 aa32.68■■■□□ 2.82
LRRFIP1-205ENST00000420665 TATP17735 454 aaPredicted RBP32.66■■■□□ 2.82
LRRFIP1-205ENST00000420665 DDX54Q8TDD1 881 aaKnown RBP32.65■■■□□ 2.82
LRRFIP1-205ENST00000420665 APBA3O96018 575 aa32.64■■■□□ 2.82
LRRFIP1-205ENST00000420665 ZCRB1Q8TBF4 217 aaKnown RBP32.64■■■□□ 2.82
LRRFIP1-205ENST00000420665 MTHFSP49914 203 aa32.63■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms