RNA–Protein interactions for RNA: ENST00000420410.5

LPP-204, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 3

Gene LPP, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-204ENST00000420410 AXIN2Q9Y2T1 843 aa26.52■■□□□ 1.84
LPP-204ENST00000420410 ONECUT3O60422 494 aaPredicted RBP26.51■■□□□ 1.83
LPP-204ENST00000420410 GGNBP2Q9H3C7 697 aa26.51■■□□□ 1.83
LPP-204ENST00000420410 NSD3Q9BZ95 1437 aa26.5■■□□□ 1.83
LPP-204ENST00000420410 FYB1O15117 783 aa26.5■■□□□ 1.83
LPP-204ENST00000420410 COL18A1P39060 1754 aa26.5■■□□□ 1.83
LPP-204ENST00000420410 UPF1Q92900 1129 aaKnown RBP eCLIP26.48■■□□□ 1.83
LPP-204ENST00000420410 BRWD3Q6RI45 1802 aa26.45■■□□□ 1.82
LPP-204ENST00000420410 CSB-PGBD3P0DP91 1061 aa26.44■■□□□ 1.82
LPP-204ENST00000420410 FBLN1P23142 703 aa26.44■■□□□ 1.82
LPP-204ENST00000420410 TOM1L2Q6ZVM7 507 aa26.44■■□□□ 1.82
LPP-204ENST00000420410 TCP11L2Q8N4U5 519 aa26.44■■□□□ 1.82
LPP-204ENST00000420410 LTN1O94822 1766 aa26.43■■□□□ 1.82
LPP-204ENST00000420410 RGPD5Q99666 1765 aa26.43■■□□□ 1.82
LPP-204ENST00000420410 CRB1P82279 1406 aa26.43■■□□□ 1.82
LPP-204ENST00000420410 KRT27Q7Z3Y8 459 aa26.43■■□□□ 1.82
LPP-204ENST00000420410 PANK3Q9H999 370 aa26.43■■□□□ 1.82
LPP-204ENST00000420410 KIF7Q2M1P5 1343 aa26.42■■□□□ 1.82
LPP-204ENST00000420410 KIF20BQ96Q89 1820 aa26.42■■□□□ 1.82
LPP-204ENST00000420410 WDR17Q8IZU2 1322 aa26.41■■□□□ 1.82
LPP-204ENST00000420410 ABCC6O95255 1503 aa26.4■■□□□ 1.82
LPP-204ENST00000420410 BARGINQ6ZT62 677 aa26.4■■□□□ 1.82
LPP-204ENST00000420410 THSD7AQ9UPZ6 1657 aa26.4■■□□□ 1.82
LPP-204ENST00000420410 MAP3K19Q56UN5 1328 aa26.39■■□□□ 1.82
LPP-204ENST00000420410 CGNL1Q0VF96 1302 aa26.39■■□□□ 1.81
LPP-204ENST00000420410 THRAP3Q9Y2W1 955 aaKnown RBP26.38■■□□□ 1.81
LPP-204ENST00000420410 RRS1Q15050 365 aaKnown RBP26.37■■□□□ 1.81
LPP-204ENST00000420410 EP400Q96L91 3159 aa26.37■■□□□ 1.81
LPP-204ENST00000420410 AMPHP49418 695 aa26.36■■□□□ 1.81
LPP-204ENST00000420410 IP6K1Q92551 441 aa26.36■■□□□ 1.81
LPP-204ENST00000420410 FAM182BQ5T319 152 aa26.35■■□□□ 1.81
LPP-204ENST00000420410 ANKRD24Q8TF21 1146 aa26.35■■□□□ 1.81
LPP-204ENST00000420410 ERBB3P21860 1342 aa26.35■■□□□ 1.81
LPP-204ENST00000420410 LTV1Q96GA3 475 aaPredicted RBP26.34■■□□□ 1.81
LPP-204ENST00000420410 HOXC9P31274 260 aa26.33■■□□□ 1.81
LPP-204ENST00000420410 CARD10Q9BWT7 1032 aa26.33■■□□□ 1.81
LPP-204ENST00000420410 NLRP2Q9NX02 1062 aa26.33■■□□□ 1.81
LPP-204ENST00000420410 BLMP54132 1417 aaPredicted RBP26.32■■□□□ 1.8
LPP-204ENST00000420410 CCDC7Q96M83 1385 aa26.3■■□□□ 1.8
LPP-204ENST00000420410 PDE3BQ13370 1112 aa26.29■■□□□ 1.8
LPP-204ENST00000420410 WASHC2AQ641Q2 1341 aa26.29■■□□□ 1.8
LPP-204ENST00000420410 TNNT2P45379 298 aaPredicted RBP26.27■■□□□ 1.8
LPP-204ENST00000420410 KNSTRNQ9Y448 316 aa26.27■■□□□ 1.8
LPP-204ENST00000420410 RTL1A6NKG5 1358 aa26.27■■□□□ 1.8
LPP-204ENST00000420410 PPM1GO15355 546 aaPredicted RBP26.25■■□□□ 1.79
LPP-204ENST00000420410 CCDC125Q86Z20 511 aa26.25■■□□□ 1.79
LPP-204ENST00000420410 EMILIN1Q9Y6C2 1016 aa26.25■■□□□ 1.79
LPP-204ENST00000420410 PARP4Q9UKK3 1724 aaKnown RBP26.25■■□□□ 1.79
LPP-204ENST00000420410 DDB1Q16531 1140 aa26.24■■□□□ 1.79
LPP-204ENST00000420410 CDCA7Q9BWT1 371 aaPredicted RBP26.24■■□□□ 1.79
LPP-204ENST00000420410 HSP90AB2PQ58FF8 381 aa26.23■■□□□ 1.79
LPP-204ENST00000420410 WNK3Q9BYP7 1800 aa26.23■■□□□ 1.79
LPP-204ENST00000420410 PEAK1Q9H792 1746 aa26.22■■□□□ 1.79
LPP-204ENST00000420410 FLT4P35916 1363 aa26.22■■□□□ 1.79
LPP-204ENST00000420410 LRRC37A3O60309 1634 aa26.22■■□□□ 1.79
LPP-204ENST00000420410 ANKRD26Q9UPS8 1709 aa26.22■■□□□ 1.79
LPP-204ENST00000420410 DISP2A7MBM2 1401 aa26.22■■□□□ 1.79
LPP-204ENST00000420410 NSD2O96028 1365 aa26.21■■□□□ 1.79
LPP-204ENST00000420410 SF3B2Q13435 895 aaKnown RBP26.21■■□□□ 1.79
LPP-204ENST00000420410 FAM196AQ6ZSG2 479 aa26.21■■□□□ 1.79
LPP-204ENST00000420410 INSRP06213 1382 aa26.2■■□□□ 1.78
LPP-204ENST00000420410 IL2RBP14784 551 aa26.19■■□□□ 1.78
LPP-204ENST00000420410 MORC1Q86VD1 984 aa26.19■■□□□ 1.78
LPP-204ENST00000420410 KIF24Q5T7B8 1368 aa26.19■■□□□ 1.78
LPP-204ENST00000420410 AMER1Q5JTC6 1135 aaPredicted RBP26.18■■□□□ 1.78
LPP-204ENST00000420410 SMG6Q86US8 1419 aaKnown RBP26.18■■□□□ 1.78
LPP-204ENST00000420410 POLKQ9UBT6 870 aa26.18■■□□□ 1.78
LPP-204ENST00000420410 FAM208AQ9UK61 1670 aaKnown RBP26.18■■□□□ 1.78
LPP-204ENST00000420410 EXOC5O00471 708 aa26.17■■□□□ 1.78
LPP-204ENST00000420410 DEFB132Q7Z7B7 95 aa26.17■■□□□ 1.78
LPP-204ENST00000420410 PER1O15534 1290 aaPredicted RBP26.16■■□□□ 1.78
LPP-204ENST00000420410 TRIM37O94972 964 aa26.16■■□□□ 1.78
LPP-204ENST00000420410 MAP2P11137 1827 aaKnown RBP26.16■■□□□ 1.78
LPP-204ENST00000420410 NBPF6Q5VWK0 638 aa26.15■■□□□ 1.78
LPP-204ENST00000420410 USHBP1Q8N6Y0 703 aa26.15■■□□□ 1.78
LPP-204ENST00000420410 MARCH10Q8NA82 808 aaPredicted RBP26.15■■□□□ 1.78
LPP-204ENST00000420410 NBPF4Q96M43 638 aa26.15■■□□□ 1.78
LPP-204ENST00000420410 RGPD2P0DJD1 1756 aa26.15■■□□□ 1.78
LPP-204ENST00000420410 OVOS2A0A0G2JMS6 1433 aa26.13■■□□□ 1.77
LPP-204ENST00000420410 TNS2Q63HR2 1409 aa26.13■■□□□ 1.77
LPP-204ENST00000420410 CNGB1Q14028 1251 aaPredicted RBP26.12■■□□□ 1.77
LPP-204ENST00000420410 CC2D1BQ5T0F9 858 aaKnown RBP26.12■■□□□ 1.77
LPP-204ENST00000420410 BAG6P46379 1132 aa26.1■■□□□ 1.77
LPP-204ENST00000420410 RGPD1P0DJD0 1748 aa26.1■■□□□ 1.77
LPP-204ENST00000420410 TNS1Q9HBL0 1735 aaKnown RBP26.06■■□□□ 1.76
LPP-204ENST00000420410 MEGF6O75095 1541 aa26.06■■□□□ 1.76
LPP-204ENST00000420410 EN1Q05925 392 aaPredicted RBP26.06■■□□□ 1.76
LPP-204ENST00000420410 APBA3O96018 575 aa26.05■■□□□ 1.76
LPP-204ENST00000420410 RAPGEF4Q8WZA2 1011 aa26.05■■□□□ 1.76
LPP-204ENST00000420410 EIF4A2Q14240 407 aaKnown RBP26.04■■□□□ 1.76
LPP-204ENST00000420410 DDX54Q8TDD1 881 aaKnown RBP26.04■■□□□ 1.76
LPP-204ENST00000420410 EYA1Q99502 592 aa26.03■■□□□ 1.76
LPP-204ENST00000420410 ZEB1P37275 1124 aaPredicted RBP26.02■■□□□ 1.76
LPP-204ENST00000420410 PTF1AQ7RTS3 328 aa26.02■■□□□ 1.76
LPP-204ENST00000420410 TATP17735 454 aaPredicted RBP26.01■■□□□ 1.75
LPP-204ENST00000420410 ZCRB1Q8TBF4 217 aaKnown RBP26.01■■□□□ 1.75
LPP-204ENST00000420410 NPC1L1Q9UHC9 1359 aa26.01■■□□□ 1.75
LPP-204ENST00000420410 BCL9O00512 1426 aa26■■□□□ 1.75
LPP-204ENST00000420410 EZH2Q15910 746 aaKnown RBP25.99■■□□□ 1.75
LPP-204ENST00000420410 ACSBG1Q96GR2 724 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms