RNA–Protein interactions for RNA: ENST00000419721.5

C1GALT1-203, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 3

Gene C1GALT1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-203ENST00000419721 GGNBP2Q9H3C7 697 aa28.84■■■□□ 2.21
C1GALT1-203ENST00000419721 EVA1CP58658 441 aa28.82■■■□□ 2.2
C1GALT1-203ENST00000419721 PANK3Q9H999 370 aa28.82■■■□□ 2.2
C1GALT1-203ENST00000419721 ANKRD26Q9UPS8 1709 aa28.8■■■□□ 2.2
C1GALT1-203ENST00000419721 CCDC7Q96M83 1385 aa28.8■■■□□ 2.2
C1GALT1-203ENST00000419721 SPATA31A1Q5TZJ5 1347 aa28.8■■■□□ 2.2
C1GALT1-203ENST00000419721 AXIN2Q9Y2T1 843 aa28.8■■■□□ 2.2
C1GALT1-203ENST00000419721 CGNL1Q0VF96 1302 aa28.79■■■□□ 2.2
C1GALT1-203ENST00000419721 ONECUT3O60422 494 aaPredicted RBP28.79■■■□□ 2.2
C1GALT1-203ENST00000419721 THSD7AQ9UPZ6 1657 aa28.78■■■□□ 2.2
C1GALT1-203ENST00000419721 LARP1Q6PKG0 1096 aaKnown RBP28.78■■■□□ 2.2
C1GALT1-203ENST00000419721 WASHC2AQ641Q2 1341 aa28.77■■■□□ 2.2
C1GALT1-203ENST00000419721 CRB1P82279 1406 aa28.77■■■□□ 2.2
C1GALT1-203ENST00000419721 BRWD3Q6RI45 1802 aa28.76■■■□□ 2.19
C1GALT1-203ENST00000419721 FAM98CQ17RN3 349 aaKnown RBP28.75■■■□□ 2.19
C1GALT1-203ENST00000419721 WDR17Q8IZU2 1322 aa28.74■■■□□ 2.19
C1GALT1-203ENST00000419721 SEPT12Q8IYM1 358 aa28.74■■■□□ 2.19
C1GALT1-203ENST00000419721 BLMP54132 1417 aaPredicted RBP28.73■■■□□ 2.19
C1GALT1-203ENST00000419721 MAP3K19Q56UN5 1328 aa28.72■■■□□ 2.19
C1GALT1-203ENST00000419721 FBLN1P23142 703 aa28.71■■■□□ 2.19
C1GALT1-203ENST00000419721 NSD2O96028 1365 aa28.71■■■□□ 2.19
C1GALT1-203ENST00000419721 BARGINQ6ZT62 677 aa28.7■■■□□ 2.18
C1GALT1-203ENST00000419721 IP6K1Q92551 441 aa28.7■■■□□ 2.18
C1GALT1-203ENST00000419721 USP35Q9P2H5 1018 aa28.7■■■□□ 2.18
C1GALT1-203ENST00000419721 THRAP3Q9Y2W1 955 aaKnown RBP28.7■■■□□ 2.18
C1GALT1-203ENST00000419721 RTL1A6NKG5 1358 aa28.7■■■□□ 2.18
C1GALT1-203ENST00000419721 WNK3Q9BYP7 1800 aa28.69■■■□□ 2.18
C1GALT1-203ENST00000419721 TOM1L2Q6ZVM7 507 aa28.69■■■□□ 2.18
C1GALT1-203ENST00000419721 TCP11L2Q8N4U5 519 aa28.69■■■□□ 2.18
C1GALT1-203ENST00000419721 ERBB3P21860 1342 aa28.69■■■□□ 2.18
C1GALT1-203ENST00000419721 ZEB1P37275 1124 aaPredicted RBP28.68■■■□□ 2.18
C1GALT1-203ENST00000419721 FAM208AQ9UK61 1670 aaKnown RBP28.67■■■□□ 2.18
C1GALT1-203ENST00000419721 A0A0G2JS52 829 aa28.67■■■□□ 2.18
C1GALT1-203ENST00000419721 MYT1Q01538 1121 aa28.67■■■□□ 2.18
C1GALT1-203ENST00000419721 RRS1Q15050 365 aaKnown RBP28.67■■■□□ 2.18
C1GALT1-203ENST00000419721 KNSTRNQ9Y448 316 aa28.67■■■□□ 2.18
C1GALT1-203ENST00000419721 PEAK1Q9H792 1746 aa28.66■■■□□ 2.18
C1GALT1-203ENST00000419721 CSB-PGBD3P0DP91 1061 aa28.66■■■□□ 2.18
C1GALT1-203ENST00000419721 HOXC9P31274 260 aa28.66■■■□□ 2.18
C1GALT1-203ENST00000419721 PARP4Q9UKK3 1724 aaKnown RBP28.66■■■□□ 2.18
C1GALT1-203ENST00000419721 KIF24Q5T7B8 1368 aa28.65■■■□□ 2.18
C1GALT1-203ENST00000419721 AMPHP49418 695 aa28.65■■■□□ 2.18
C1GALT1-203ENST00000419721 ANKRD24Q8TF21 1146 aa28.64■■■□□ 2.18
C1GALT1-203ENST00000419721 CARD10Q9BWT7 1032 aa28.64■■■□□ 2.18
C1GALT1-203ENST00000419721 MAP2P11137 1827 aaKnown RBP28.62■■■□□ 2.17
C1GALT1-203ENST00000419721 PER1O15534 1290 aaPredicted RBP28.62■■■□□ 2.17
C1GALT1-203ENST00000419721 KRT27Q7Z3Y8 459 aa28.62■■■□□ 2.17
C1GALT1-203ENST00000419721 AMER1Q5JTC6 1135 aaPredicted RBP28.61■■■□□ 2.17
C1GALT1-203ENST00000419721 FLT4P35916 1363 aa28.61■■■□□ 2.17
C1GALT1-203ENST00000419721 UPF1Q92900 1129 aaKnown RBP eCLIP28.6■■■□□ 2.17
C1GALT1-203ENST00000419721 LRRC37A3O60309 1634 aa28.59■■■□□ 2.17
C1GALT1-203ENST00000419721 DISP2A7MBM2 1401 aa28.59■■■□□ 2.17
C1GALT1-203ENST00000419721 EMILIN1Q9Y6C2 1016 aa28.58■■■□□ 2.17
C1GALT1-203ENST00000419721 INSRP06213 1382 aa28.58■■■□□ 2.17
C1GALT1-203ENST00000419721 NLRP2Q9NX02 1062 aa28.56■■■□□ 2.16
C1GALT1-203ENST00000419721 RGPD2P0DJD1 1756 aa28.55■■■□□ 2.16
C1GALT1-203ENST00000419721 LTV1Q96GA3 475 aaPredicted RBP28.55■■■□□ 2.16
C1GALT1-203ENST00000419721 CDCA7Q9BWT1 371 aaPredicted RBP28.55■■■□□ 2.16
C1GALT1-203ENST00000419721 MORC1Q86VD1 984 aa28.54■■■□□ 2.16
C1GALT1-203ENST00000419721 POLKQ9UBT6 870 aa28.54■■■□□ 2.16
C1GALT1-203ENST00000419721 SMG6Q86US8 1419 aaKnown RBP28.53■■■□□ 2.16
C1GALT1-203ENST00000419721 NPC1L1Q9UHC9 1359 aa28.53■■■□□ 2.16
C1GALT1-203ENST00000419721 TNNT2P45379 298 aaPredicted RBP28.53■■■□□ 2.16
C1GALT1-203ENST00000419721 HSP90AB2PQ58FF8 381 aa28.53■■■□□ 2.16
C1GALT1-203ENST00000419721 EP400Q96L91 3159 aa28.51■■■□□ 2.15
C1GALT1-203ENST00000419721 PDE3BQ13370 1112 aa28.49■■■□□ 2.15
C1GALT1-203ENST00000419721 PPM1GO15355 546 aaPredicted RBP28.48■■■□□ 2.15
C1GALT1-203ENST00000419721 DDB1Q16531 1140 aa28.48■■■□□ 2.15
C1GALT1-203ENST00000419721 TNS2Q63HR2 1409 aa28.46■■■□□ 2.15
C1GALT1-203ENST00000419721 IL2RBP14784 551 aa28.46■■■□□ 2.15
C1GALT1-203ENST00000419721 FAM182BQ5T319 152 aa28.46■■■□□ 2.15
C1GALT1-203ENST00000419721 CC2D1BQ5T0F9 858 aaKnown RBP28.45■■■□□ 2.14
C1GALT1-203ENST00000419721 NBPF6Q5VWK0 638 aa28.44■■■□□ 2.14
C1GALT1-203ENST00000419721 CCDC125Q86Z20 511 aa28.44■■■□□ 2.14
C1GALT1-203ENST00000419721 NBPF4Q96M43 638 aa28.44■■■□□ 2.14
C1GALT1-203ENST00000419721 RGPD1P0DJD0 1748 aa28.43■■■□□ 2.14
C1GALT1-203ENST00000419721 FAM196AQ6ZSG2 479 aa28.42■■■□□ 2.14
C1GALT1-203ENST00000419721 OVOS2A0A0G2JMS6 1433 aa28.42■■■□□ 2.14
C1GALT1-203ENST00000419721 NCAPD2Q15021 1401 aa28.41■■■□□ 2.14
C1GALT1-203ENST00000419721 EXOC5O00471 708 aa28.4■■■□□ 2.14
C1GALT1-203ENST00000419721 TNS1Q9HBL0 1735 aaKnown RBP28.4■■■□□ 2.14
C1GALT1-203ENST00000419721 MEGF6O75095 1541 aa28.38■■■□□ 2.13
C1GALT1-203ENST00000419721 USHBP1Q8N6Y0 703 aa28.38■■■□□ 2.13
C1GALT1-203ENST00000419721 EIF4A2Q14240 407 aaKnown RBP28.37■■■□□ 2.13
C1GALT1-203ENST00000419721 MARCH10Q8NA82 808 aaPredicted RBP28.37■■■□□ 2.13
C1GALT1-203ENST00000419721 BCL9O00512 1426 aa28.36■■■□□ 2.13
C1GALT1-203ENST00000419721 SBF2Q86WG5 1849 aa28.36■■■□□ 2.13
C1GALT1-203ENST00000419721 SHANK3Q9BYB0 1731 aa28.35■■■□□ 2.13
C1GALT1-203ENST00000419721 SF3B2Q13435 895 aaKnown RBP28.33■■■□□ 2.13
C1GALT1-203ENST00000419721 CNGB1Q14028 1251 aaPredicted RBP28.33■■■□□ 2.13
C1GALT1-203ENST00000419721 EYA1Q99502 592 aa28.33■■■□□ 2.13
C1GALT1-203ENST00000419721 MTHFSP49914 203 aa28.31■■■□□ 2.12
C1GALT1-203ENST00000419721 RAPGEF4Q8WZA2 1011 aa28.31■■■□□ 2.12
C1GALT1-203ENST00000419721 PKD1L3Q7Z443 1732 aa28.29■■■□□ 2.12
C1GALT1-203ENST00000419721 IGSF1Q8N6C5 1336 aa28.29■■■□□ 2.12
C1GALT1-203ENST00000419721 TRIM37O94972 964 aa28.29■■■□□ 2.12
C1GALT1-203ENST00000419721 TATP17735 454 aaPredicted RBP28.29■■■□□ 2.12
C1GALT1-203ENST00000419721 DDX10Q13206 875 aaKnown RBP28.27■■■□□ 2.12
C1GALT1-203ENST00000419721 ZCRB1Q8TBF4 217 aaKnown RBP28.27■■■□□ 2.12
C1GALT1-203ENST00000419721 IL13P35225 146 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms