RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 KIF7Q2M1P5 1343 aa18.42■□□□□ 0.54
TMEM248-203ENST00000418375 PIK3C2AO00443 1686 aa18.41■□□□□ 0.54
TMEM248-203ENST00000418375 ZBTB7CA1YPR0 619 aa18.41■□□□□ 0.54
TMEM248-203ENST00000418375 BARGINQ6ZT62 677 aa18.41■□□□□ 0.54
TMEM248-203ENST00000418375 SRCAPQ6ZRS2 3230 aa18.41■□□□□ 0.54
TMEM248-203ENST00000418375 TCP11L2Q8N4U5 519 aa18.4■□□□□ 0.54
TMEM248-203ENST00000418375 MYOM1P52179 1685 aa18.39■□□□□ 0.53
TMEM248-203ENST00000418375 LMO7Q8WWI1 1683 aa18.39■□□□□ 0.53
TMEM248-203ENST00000418375 CARD14Q9BXL6 1004 aa18.39■□□□□ 0.53
TMEM248-203ENST00000418375 SLIT3O75094 1523 aa18.39■□□□□ 0.53
TMEM248-203ENST00000418375 FAM196AQ6ZSG2 479 aa18.38■□□□□ 0.53
TMEM248-203ENST00000418375 COG3Q96JB2 828 aa18.38■□□□□ 0.53
TMEM248-203ENST00000418375 THRAP3Q9Y2W1 955 aaKnown RBP18.38■□□□□ 0.53
TMEM248-203ENST00000418375 AATKQ6ZMQ8 1374 aa18.38■□□□□ 0.53
TMEM248-203ENST00000418375 NSD3Q9BZ95 1437 aa18.38■□□□□ 0.53
TMEM248-203ENST00000418375 SOX12O15370 315 aa18.37■□□□□ 0.53
TMEM248-203ENST00000418375 PDE3BQ13370 1112 aa18.37■□□□□ 0.53
TMEM248-203ENST00000418375 PANK3Q9H999 370 aa18.37■□□□□ 0.53
TMEM248-203ENST00000418375 COL5A2P05997 1499 aaPredicted RBP18.37■□□□□ 0.53
TMEM248-203ENST00000418375 EN1Q05925 392 aaPredicted RBP18.36■□□□□ 0.53
TMEM248-203ENST00000418375 CCDC7Q96M83 1385 aa18.36■□□□□ 0.53
TMEM248-203ENST00000418375 OVOS2A0A0J9YW53 1432 aa18.35■□□□□ 0.53
TMEM248-203ENST00000418375 OVOS2Q6IE36 1432 aa18.35■□□□□ 0.53
TMEM248-203ENST00000418375 CGNL1Q0VF96 1302 aa18.35■□□□□ 0.53
TMEM248-203ENST00000418375 FYB1O15117 783 aa18.35■□□□□ 0.53
TMEM248-203ENST00000418375 CRB1P82279 1406 aa18.34■□□□□ 0.53
TMEM248-203ENST00000418375 WASHC2AQ641Q2 1341 aa18.34■□□□□ 0.53
TMEM248-203ENST00000418375 TRIM37O94972 964 aa18.34■□□□□ 0.53
TMEM248-203ENST00000418375 GGNBP2Q9H3C7 697 aa18.34■□□□□ 0.53
TMEM248-203ENST00000418375 ARHGEF25Q86VW2 580 aa18.33■□□□□ 0.52
TMEM248-203ENST00000418375 DISP2A7MBM2 1401 aa18.32■□□□□ 0.52
TMEM248-203ENST00000418375 RGPD1P0DJD0 1748 aa18.32■□□□□ 0.52
TMEM248-203ENST00000418375 USP54Q70EL1 1684 aa18.32■□□□□ 0.52
TMEM248-203ENST00000418375 TOM1L2Q6ZVM7 507 aa18.32■□□□□ 0.52
TMEM248-203ENST00000418375 AXIN2Q9Y2T1 843 aa18.31■□□□□ 0.52
TMEM248-203ENST00000418375 NFAT5O94916 1531 aa18.3■□□□□ 0.52
TMEM248-203ENST00000418375 ADRA2BP18089 450 aa18.3■□□□□ 0.52
TMEM248-203ENST00000418375 KNSTRNQ9Y448 316 aa18.3■□□□□ 0.52
TMEM248-203ENST00000418375 WDR17Q8IZU2 1322 aa18.29■□□□□ 0.52
TMEM248-203ENST00000418375 PSDA5PKW4 1024 aaPredicted RBP18.29■□□□□ 0.52
TMEM248-203ENST00000418375 APBA3O96018 575 aa18.29■□□□□ 0.52
TMEM248-203ENST00000418375 EZH2Q15910 746 aaKnown RBP18.29■□□□□ 0.52
TMEM248-203ENST00000418375 CAMKK2Q96RR4 588 aa18.28■□□□□ 0.52
TMEM248-203ENST00000418375 CSB-PGBD3P0DP91 1061 aa18.27■□□□□ 0.52
TMEM248-203ENST00000418375 NSD2O96028 1365 aa18.27■□□□□ 0.51
TMEM248-203ENST00000418375 TNS1Q9HBL0 1735 aaKnown RBP18.26■□□□□ 0.51
TMEM248-203ENST00000418375 DDB1Q16531 1140 aa18.26■□□□□ 0.51
TMEM248-203ENST00000418375 PARD3Q8TEW0 1356 aa18.26■□□□□ 0.51
TMEM248-203ENST00000418375 KIF20BQ96Q89 1820 aa18.26■□□□□ 0.51
TMEM248-203ENST00000418375 COL18A1P39060 1754 aa18.25■□□□□ 0.51
TMEM248-203ENST00000418375 ABCC6O95255 1503 aa18.24■□□□□ 0.51
TMEM248-203ENST00000418375 PARP4Q9UKK3 1724 aaKnown RBP18.24■□□□□ 0.51
TMEM248-203ENST00000418375 R3HDM1Q15032 1099 aaKnown RBP18.24■□□□□ 0.51
TMEM248-203ENST00000418375 POTEDQ86YR6 584 aa18.24■□□□□ 0.51
TMEM248-203ENST00000418375 CDCA7Q9BWT1 371 aaPredicted RBP18.24■□□□□ 0.51
TMEM248-203ENST00000418375 CARD10Q9BWT7 1032 aa18.24■□□□□ 0.51
TMEM248-203ENST00000418375 MAP3K19Q56UN5 1328 aa18.23■□□□□ 0.51
TMEM248-203ENST00000418375 OVOS2A0A0G2JMS6 1433 aa18.23■□□□□ 0.51
TMEM248-203ENST00000418375 AMPHP49418 695 aa18.23■□□□□ 0.51
TMEM248-203ENST00000418375 FBLN1P23142 703 aa18.22■□□□□ 0.51
TMEM248-203ENST00000418375 IP6K1Q92551 441 aa18.22■□□□□ 0.51
TMEM248-203ENST00000418375 PER1O15534 1290 aaPredicted RBP18.21■□□□□ 0.51
TMEM248-203ENST00000418375 RRS1Q15050 365 aaKnown RBP18.21■□□□□ 0.51
TMEM248-203ENST00000418375 AMER1Q5JTC6 1135 aaPredicted RBP18.21■□□□□ 0.51
TMEM248-203ENST00000418375 MORC1Q86VD1 984 aa18.21■□□□□ 0.51
TMEM248-203ENST00000418375 RTL1A6NKG5 1358 aa18.19■□□□□ 0.5
TMEM248-203ENST00000418375 HOXC9P31274 260 aa18.19■□□□□ 0.5
TMEM248-203ENST00000418375 LRRC37A3O60309 1634 aa18.19■□□□□ 0.5
TMEM248-203ENST00000418375 KIF24Q5T7B8 1368 aa18.18■□□□□ 0.5
TMEM248-203ENST00000418375 EXOC5O00471 708 aa18.18■□□□□ 0.5
TMEM248-203ENST00000418375 TNNT2P45379 298 aaPredicted RBP18.18■□□□□ 0.5
TMEM248-203ENST00000418375 MARCH10Q8NA82 808 aaPredicted RBP18.18■□□□□ 0.5
TMEM248-203ENST00000418375 ANKRD24Q8TF21 1146 aa18.18■□□□□ 0.5
TMEM248-203ENST00000418375 ERBB3P21860 1342 aa18.18■□□□□ 0.5
TMEM248-203ENST00000418375 LTN1O94822 1766 aa18.17■□□□□ 0.5
TMEM248-203ENST00000418375 LRP5O75197 1615 aa18.17■□□□□ 0.5
TMEM248-203ENST00000418375 NBPF14Q5TI25 921 aa18.17■□□□□ 0.5
TMEM248-203ENST00000418375 NLRP2Q9NX02 1062 aa18.17■□□□□ 0.5
TMEM248-203ENST00000418375 NPC1L1Q9UHC9 1359 aa18.17■□□□□ 0.5
TMEM248-203ENST00000418375 PEAK1Q9H792 1746 aa18.16■□□□□ 0.5
TMEM248-203ENST00000418375 BCL11BQ9C0K0 894 aaPredicted RBP18.16■□□□□ 0.5
TMEM248-203ENST00000418375 FLT4P35916 1363 aa18.16■□□□□ 0.5
TMEM248-203ENST00000418375 PLSCR1O15162 318 aa18.15■□□□□ 0.5
TMEM248-203ENST00000418375 PPM1GO15355 546 aaPredicted RBP18.15■□□□□ 0.5
TMEM248-203ENST00000418375 CC2D1BQ5T0F9 858 aaKnown RBP18.15■□□□□ 0.5
TMEM248-203ENST00000418375 LTV1Q96GA3 475 aaPredicted RBP18.15■□□□□ 0.5
TMEM248-203ENST00000418375 EMILIN1Q9Y6C2 1016 aa18.15■□□□□ 0.5
TMEM248-203ENST00000418375 ANKRD26Q9UPS8 1709 aa18.15■□□□□ 0.5
TMEM248-203ENST00000418375 BCL9O00512 1426 aa18.15■□□□□ 0.5
TMEM248-203ENST00000418375 RGPD5Q99666 1765 aa18.14■□□□□ 0.5
TMEM248-203ENST00000418375 POLKQ9UBT6 870 aa18.14■□□□□ 0.49
TMEM248-203ENST00000418375 INSRP06213 1382 aa18.13■□□□□ 0.49
TMEM248-203ENST00000418375 SMG6Q86US8 1419 aaKnown RBP18.13■□□□□ 0.49
TMEM248-203ENST00000418375 RREB1Q92766 1687 aa18.12■□□□□ 0.49
TMEM248-203ENST00000418375 WNK3Q9BYP7 1800 aa18.12■□□□□ 0.49
TMEM248-203ENST00000418375 HSP90AB2PQ58FF8 381 aa18.12■□□□□ 0.49
TMEM248-203ENST00000418375 PTF1AQ7RTS3 328 aa18.12■□□□□ 0.49
TMEM248-203ENST00000418375 TNS2Q63HR2 1409 aa18.12■□□□□ 0.49
TMEM248-203ENST00000418375 IL2RBP14784 551 aa18.11■□□□□ 0.49
TMEM248-203ENST00000418375 CNGB1Q14028 1251 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms