RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 TRPM3Q9HCF6 1732 aaPredicted RBP9.4□□□□□ -0.9
CPS1-202ENST00000417946 PLEKHG3A1L390 1219 aa9.4□□□□□ -0.9
CPS1-202ENST00000417946 PROSER2Q86WR7 435 aaPredicted RBP9.4□□□□□ -0.9
CPS1-202ENST00000417946 C1orf167Q5SNV9 1468 aa9.4□□□□□ -0.91
CPS1-202ENST00000417946 PIK3C2AO00443 1686 aa9.39□□□□□ -0.91
CPS1-202ENST00000417946 KIF1AQ12756 1690 aa9.39□□□□□ -0.91
CPS1-202ENST00000417946 SNPHO15079 494 aa9.39□□□□□ -0.91
CPS1-202ENST00000417946 CCDC184Q52MB2 194 aa9.39□□□□□ -0.91
CPS1-202ENST00000417946 TMC1Q8TDI8 760 aa9.39□□□□□ -0.91
CPS1-202ENST00000417946 L3MBTL3Q96JM7 780 aaPredicted RBP9.39□□□□□ -0.91
CPS1-202ENST00000417946 USP6P35125 1406 aa9.39□□□□□ -0.91
CPS1-202ENST00000417946 NUTM2FA1L443 756 aa9.38□□□□□ -0.91
CPS1-202ENST00000417946 PSEN1P49768 467 aa9.38□□□□□ -0.91
CPS1-202ENST00000417946 PDAP1Q13442 181 aaKnown RBP9.38□□□□□ -0.91
CPS1-202ENST00000417946 EDC4Q6P2E9 1401 aaKnown RBP9.38□□□□□ -0.91
CPS1-202ENST00000417946 KTN1Q86UP2 1357 aaKnown RBP9.37□□□□□ -0.91
CPS1-202ENST00000417946 ANP32CO43423 234 aa9.37□□□□□ -0.91
CPS1-202ENST00000417946 IFNLR1Q8IU57 520 aaPredicted RBP9.37□□□□□ -0.91
CPS1-202ENST00000417946 ACEP12821 1306 aa9.36□□□□□ -0.91
CPS1-202ENST00000417946 G3V3G9 751 aa9.36□□□□□ -0.91
CPS1-202ENST00000417946 CCER2I3L3R5 266 aa9.36□□□□□ -0.91
CPS1-202ENST00000417946 CC2D1BQ5T0F9 858 aaKnown RBP9.36□□□□□ -0.91
CPS1-202ENST00000417946 C3orf67Q6ZVT6 689 aa9.36□□□□□ -0.91
CPS1-202ENST00000417946 C19orf44Q9H6X5 657 aa9.36□□□□□ -0.91
CPS1-202ENST00000417946 OVOS2A0A0J9YW53 1432 aa9.36□□□□□ -0.91
CPS1-202ENST00000417946 OVOS2Q6IE36 1432 aa9.36□□□□□ -0.91
CPS1-202ENST00000417946 NSD2O96028 1365 aa9.36□□□□□ -0.91
CPS1-202ENST00000417946 ALS2Q96Q42 1657 aa9.36□□□□□ -0.91
CPS1-202ENST00000417946 TERF2IPQ9NYB0 399 aa9.35□□□□□ -0.91
CPS1-202ENST00000417946 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.35□□□□□ -0.915e-8■■■■■ 35.8
CPS1-202ENST00000417946 KNSTRNQ9Y448 316 aa9.35□□□□□ -0.91
CPS1-202ENST00000417946 SHPRHQ149N8 1683 aa9.35□□□□□ -0.91
CPS1-202ENST00000417946 IQSEC2Q5JU85 1478 aa9.34□□□□□ -0.91
CPS1-202ENST00000417946 CRYBG1Q9Y4K1 1723 aa9.34□□□□□ -0.91
CPS1-202ENST00000417946 FYB1O15117 783 aa9.34□□□□□ -0.91
CPS1-202ENST00000417946 RALBP1Q15311 655 aa9.34□□□□□ -0.91
CPS1-202ENST00000417946 ORAI2Q96SN7 254 aa9.34□□□□□ -0.91
CPS1-202ENST00000417946 MSH6P52701 1360 aa9.34□□□□□ -0.91
CPS1-202ENST00000417946 NHSL1Q5SYE7 1610 aa9.34□□□□□ -0.91
CPS1-202ENST00000417946 PXDNQ92626 1479 aa9.34□□□□□ -0.91
CPS1-202ENST00000417946 CGNL1Q0VF96 1302 aa9.33□□□□□ -0.92
CPS1-202ENST00000417946 TTC21BQ7Z4L5 1316 aa9.33□□□□□ -0.92
CPS1-202ENST00000417946 MYBBP1AQ9BQG0 1328 aaKnown RBP9.33□□□□□ -0.92
CPS1-202ENST00000417946 HDGFL2Q7Z4V5 671 aaPredicted RBP9.33□□□□□ -0.92
CPS1-202ENST00000417946 NME9Q86XW9 330 aa9.33□□□□□ -0.92
CPS1-202ENST00000417946 PMFBP1Q8TBY8 1022 aa9.33□□□□□ -0.92
CPS1-202ENST00000417946 PHF8Q9UPP1 1060 aa9.33□□□□□ -0.92
CPS1-202ENST00000417946 PEAK1Q9H792 1746 aa9.33□□□□□ -0.92
CPS1-202ENST00000417946 COL3A1P02461 1466 aaPredicted RBP9.33□□□□□ -0.92
CPS1-202ENST00000417946 SMG6Q86US8 1419 aaKnown RBP9.32□□□□□ -0.92
CPS1-202ENST00000417946 PPP2R1AP30153 589 aa9.32□□□□□ -0.92
CPS1-202ENST00000417946 CNGB1Q14028 1251 aaPredicted RBP9.32□□□□□ -0.92
CPS1-202ENST00000417946 C14orf37Q86TY3 774 aa9.32□□□□□ -0.92
CPS1-202ENST00000417946 GGNBP2Q9H3C7 697 aa9.32□□□□□ -0.92
CPS1-202ENST00000417946 BRD4O60885 1362 aaPredicted RBP9.32□□□□□ -0.92
CPS1-202ENST00000417946 USP31Q70CQ4 1352 aa9.32□□□□□ -0.92
CPS1-202ENST00000417946 MAP2P11137 1827 aaKnown RBP9.31□□□□□ -0.92
CPS1-202ENST00000417946 NFAT5O94916 1531 aa9.31□□□□□ -0.92
CPS1-202ENST00000417946 ROBO1Q9Y6N7 1651 aa9.3□□□□□ -0.92
CPS1-202ENST00000417946 PRKCSHP14314 528 aaPredicted RBP9.3□□□□□ -0.92
CPS1-202ENST00000417946 CADPS2Q86UW7 1296 aa9.3□□□□□ -0.92
CPS1-202ENST00000417946 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.3□□□□□ -0.92
CPS1-202ENST00000417946 SLIT3O75094 1523 aa9.3□□□□□ -0.92
CPS1-202ENST00000417946 TTC21AQ8NDW8 1320 aa9.3□□□□□ -0.92
CPS1-202ENST00000417946 MED1Q15648 1581 aaPredicted RBP9.29□□□□□ -0.92
CPS1-202ENST00000417946 ABCA3Q99758 1704 aa9.29□□□□□ -0.92
CPS1-202ENST00000417946 ATF3P18847 181 aa9.29□□□□□ -0.92
CPS1-202ENST00000417946 ESCO1Q5FWF5 840 aa9.29□□□□□ -0.92
CPS1-202ENST00000417946 BRINP3Q76B58 766 aa9.29□□□□□ -0.92
CPS1-202ENST00000417946 NLRP13Q86W25 1043 aa9.29□□□□□ -0.92
CPS1-202ENST00000417946 TMEM121BQ9BXQ6 578 aaPredicted RBP9.29□□□□□ -0.92
CPS1-202ENST00000417946 AHDC1Q5TGY3 1603 aaPredicted RBP9.28□□□□□ -0.92
CPS1-202ENST00000417946 AATKQ6ZMQ8 1374 aa9.28□□□□□ -0.92
CPS1-202ENST00000417946 PHRF1Q9P1Y6 1649 aaKnown RBP9.28□□□□□ -0.92
CPS1-202ENST00000417946 NGDNQ8NEJ9 315 aaKnown RBP9.28□□□□□ -0.92
CPS1-202ENST00000417946 LTN1O94822 1766 aa9.27□□□□□ -0.92
CPS1-202ENST00000417946 LCE2DQ5TA82 110 aaPredicted RBP9.27□□□□□ -0.93
CPS1-202ENST00000417946 MORC1Q86VD1 984 aa9.27□□□□□ -0.93
CPS1-202ENST00000417946 PNISRQ8TF01 805 aaKnown RBP9.27□□□□□ -0.93
CPS1-202ENST00000417946 DDX17Q92841 729 aaKnown RBP9.27□□□□□ -0.93
CPS1-202ENST00000417946 MRS2Q9HD23 443 aa9.27□□□□□ -0.93
CPS1-202ENST00000417946 SLAIN2Q9P270 581 aa9.27□□□□□ -0.93
CPS1-202ENST00000417946 CDK12Q9NYV4 1490 aaPredicted RBP9.27□□□□□ -0.93
CPS1-202ENST00000417946 SBNO1A3KN83 1393 aa9.26□□□□□ -0.93
CPS1-202ENST00000417946 INSRP06213 1382 aa9.26□□□□□ -0.93
CPS1-202ENST00000417946 PNPLA6Q8IY17 1366 aa9.26□□□□□ -0.93
CPS1-202ENST00000417946 RGPD1P0DJD0 1748 aa9.26□□□□□ -0.93
CPS1-202ENST00000417946 TNS3Q68CZ2 1445 aa9.26□□□□□ -0.93
CPS1-202ENST00000417946 FOXO3O43524 673 aa9.26□□□□□ -0.93
CPS1-202ENST00000417946 ST18O60284 1047 aa9.26□□□□□ -0.93
CPS1-202ENST00000417946 FBLN1P23142 703 aa9.26□□□□□ -0.93
CPS1-202ENST00000417946 XPCQ01831 940 aaPredicted RBP9.26□□□□□ -0.93
CPS1-202ENST00000417946 PDCD7Q8N8D1 485 aaKnown RBP9.26□□□□□ -0.93
CPS1-202ENST00000417946 USP19O94966 1318 aa9.26□□□□□ -0.93
CPS1-202ENST00000417946 BLMP54132 1417 aaPredicted RBP9.25□□□□□ -0.93
CPS1-202ENST00000417946 COL16A1Q07092 1604 aaPredicted RBP9.25□□□□□ -0.93
CPS1-202ENST00000417946 TNNT2P45379 298 aaPredicted RBP9.25□□□□□ -0.93
CPS1-202ENST00000417946 CERKQ8TCT0 537 aa9.25□□□□□ -0.93
CPS1-202ENST00000417946 SOS2Q07890 1332 aaPredicted RBP9.25□□□□□ -0.93
CPS1-202ENST00000417946 COL18A1P39060 1754 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms