RNA–Protein interactions for RNA: ENST00000416671.5

CHEK2-210, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best)

Gene CHEK2, Length 2,560 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-210ENST00000416671 TECPR2O15040 1411 aa17.4■□□□□ 0.38
CHEK2-210ENST00000416671 PPIP5K1Q6PFW1 1433 aa17.4■□□□□ 0.38
CHEK2-210ENST00000416671 ISY1Q9ULR0 285 aaKnown RBP17.4■□□□□ 0.38
CHEK2-210ENST00000416671 KIF20BQ96Q89 1820 aa17.4■□□□□ 0.38
CHEK2-210ENST00000416671 AAMPQ13685 434 aa17.39■□□□□ 0.38
CHEK2-210ENST00000416671 NUDT16Q96DE0 195 aaKnown RBP17.39■□□□□ 0.38
CHEK2-210ENST00000416671 POLKQ9UBT6 870 aa17.39■□□□□ 0.38
CHEK2-210ENST00000416671 TBX22Q9Y458 520 aa17.39■□□□□ 0.38
CHEK2-210ENST00000416671 TRIM35Q9UPQ4 493 aa17.39■□□□□ 0.37
CHEK2-210ENST00000416671 RBM33Q96EV2 1170 aaKnown RBP17.38■□□□□ 0.37
CHEK2-210ENST00000416671 PDZRN3Q9UPQ7 1066 aa17.38■□□□□ 0.37
CHEK2-210ENST00000416671 EMILIN1Q9Y6C2 1016 aa17.38■□□□□ 0.37
CHEK2-210ENST00000416671 CPS1P31327 1500 aa17.38■□□□□ 0.37
CHEK2-210ENST00000416671 ADGRB2O60241 1585 aa17.38■□□□□ 0.37
CHEK2-210ENST00000416671 FAM135BQ49AJ0 1406 aa17.38■□□□□ 0.37
CHEK2-210ENST00000416671 RLBP1P12271 317 aa17.38■□□□□ 0.37
CHEK2-210ENST00000416671 KNDC1Q76NI1 1749 aa17.38■□□□□ 0.37
CHEK2-210ENST00000416671 DDX11L8A8MPP1 907 aa17.37■□□□□ 0.37
CHEK2-210ENST00000416671 ANKLE2Q86XL3 938 aa17.37■□□□□ 0.37
CHEK2-210ENST00000416671 HMOX1P09601 288 aa17.37■□□□□ 0.37
CHEK2-210ENST00000416671 RIPK4P57078 832 aa17.37■□□□□ 0.37
CHEK2-210ENST00000416671 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.37■□□□□ 0.37
CHEK2-210ENST00000416671 TRIM44Q96DX7 344 aaPredicted RBP17.36■□□□□ 0.37
CHEK2-210ENST00000416671 ATP7BP35670 1465 aa17.36■□□□□ 0.37
CHEK2-210ENST00000416671 ERBB4Q15303 1308 aa17.36■□□□□ 0.37
CHEK2-210ENST00000416671 PRR36Q9H6K5 1346 aa17.36■□□□□ 0.37
CHEK2-210ENST00000416671 KCNA6P17658 529 aa17.36■□□□□ 0.37
CHEK2-210ENST00000416671 SIRT1Q96EB6 747 aa17.36■□□□□ 0.37
CHEK2-210ENST00000416671 PNPLA6Q8IY17 1366 aa17.36■□□□□ 0.37
CHEK2-210ENST00000416671 PCDHB15Q9Y5E8 787 aa17.35■□□□□ 0.37
CHEK2-210ENST00000416671 SETD1BQ9UPS6 1966 aaKnown RBP17.35■□□□□ 0.37
CHEK2-210ENST00000416671 EXOSC9Q06265 439 aaKnown RBP17.35■□□□□ 0.37
CHEK2-210ENST00000416671 TPM2P07951 284 aa17.35■□□□□ 0.37
CHEK2-210ENST00000416671 RRS1Q15050 365 aaKnown RBP17.35■□□□□ 0.37
CHEK2-210ENST00000416671 C22orf23Q9BZE7 217 aa17.35■□□□□ 0.37
CHEK2-210ENST00000416671 CCDC61Q9Y6R9 512 aa17.35■□□□□ 0.37
CHEK2-210ENST00000416671 MAP2P11137 1827 aaKnown RBP17.34■□□□□ 0.37
CHEK2-210ENST00000416671 PRKAR2BP31323 418 aa17.34■□□□□ 0.37
CHEK2-210ENST00000416671 CPSF1Q10570 1443 aaKnown RBP17.34■□□□□ 0.37
CHEK2-210ENST00000416671 RWDD1Q9H446 243 aaPredicted RBP17.34■□□□□ 0.37
CHEK2-210ENST00000416671 ZNF142P52746 1687 aaPredicted RBP17.32■□□□□ 0.36
CHEK2-210ENST00000416671 EDC4Q6P2E9 1401 aaKnown RBP17.32■□□□□ 0.36
CHEK2-210ENST00000416671 PHACTR3Q96KR7 559 aa17.32■□□□□ 0.36
CHEK2-210ENST00000416671 HSCBQ8IWL3 235 aa17.31■□□□□ 0.36
CHEK2-210ENST00000416671 LRRC7Q96NW7 1537 aa17.3■□□□□ 0.36
CHEK2-210ENST00000416671 MFAP1P55081 439 aaKnown RBP17.3■□□□□ 0.36
CHEK2-210ENST00000416671 THUMPD2Q9BTF0 503 aaKnown RBP17.3■□□□□ 0.36
CHEK2-210ENST00000416671 FCHSD2O94868 740 aa17.3■□□□□ 0.36
CHEK2-210ENST00000416671 COG3Q96JB2 828 aa17.3■□□□□ 0.36
CHEK2-210ENST00000416671 PDCL3Q9H2J4 239 aa17.3■□□□□ 0.36
CHEK2-210ENST00000416671 SMC4Q9NTJ3 1288 aa17.3■□□□□ 0.36
CHEK2-210ENST00000416671 ZNF692Q9BU19 519 aaPredicted RBP17.29■□□□□ 0.36
CHEK2-210ENST00000416671 NCBP3Q53F19 620 aaKnown RBP17.28■□□□□ 0.36
CHEK2-210ENST00000416671 SSH1Q8WYL5 1049 aa17.28■□□□□ 0.36
CHEK2-210ENST00000416671 CDC42BPGQ6DT37 1551 aa17.27■□□□□ 0.36
CHEK2-210ENST00000416671 SOX12O15370 315 aa17.27■□□□□ 0.36
CHEK2-210ENST00000416671 DIP2AQ14689 1571 aa17.27■□□□□ 0.35
CHEK2-210ENST00000416671 IL13P35225 146 aa17.27■□□□□ 0.35
CHEK2-210ENST00000416671 HSPA2P54652 639 aa17.27■□□□□ 0.35
CHEK2-210ENST00000416671 FTSJ3Q8IY81 847 aaKnown RBP17.26■□□□□ 0.35
CHEK2-210ENST00000416671 PTCH1Q13635 1447 aa17.26■□□□□ 0.35
CHEK2-210ENST00000416671 ZKSCAN2Q63HK3 967 aa17.26■□□□□ 0.35
CHEK2-210ENST00000416671 XRN1Q8IZH2 1706 aaKnown RBP17.26■□□□□ 0.35
CHEK2-210ENST00000416671 NCOA3Q9Y6Q9 1424 aa17.26■□□□□ 0.35
CHEK2-210ENST00000416671 GAS2L3Q86XJ1 694 aa17.25■□□□□ 0.35
CHEK2-210ENST00000416671 ACEP12821 1306 aa17.25■□□□□ 0.35
CHEK2-210ENST00000416671 NPHP4O75161 1426 aaPredicted RBP17.25■□□□□ 0.35
CHEK2-210ENST00000416671 KDM4FA0A1W2PPD8 638 aa17.25■□□□□ 0.35
CHEK2-210ENST00000416671 SKOR2Q2VWA4 1001 aaPredicted RBP17.25■□□□□ 0.35
CHEK2-210ENST00000416671 TRIM27P14373 513 aa17.24■□□□□ 0.35
CHEK2-210ENST00000416671 DDIT3P35638 169 aa17.24■□□□□ 0.35
CHEK2-210ENST00000416671 KIAA1211Q6ZU35 1233 aa17.24■□□□□ 0.35
CHEK2-210ENST00000416671 GBP4Q96PP9 640 aa17.24■□□□□ 0.35
CHEK2-210ENST00000416671 DZIP1LQ8IYY4 767 aaKnown RBP17.24■□□□□ 0.35
CHEK2-210ENST00000416671 NOB1Q9ULX3 412 aaKnown RBP17.24■□□□□ 0.35
CHEK2-210ENST00000416671 MON2Q7Z3U7 1717 aa17.23■□□□□ 0.35
CHEK2-210ENST00000416671 MVPQ14764 893 aaKnown RBP17.23■□□□□ 0.35
CHEK2-210ENST00000416671 TNPO1Q92973 898 aaKnown RBP17.23■□□□□ 0.35
CHEK2-210ENST00000416671 PTMSP20962 102 aa17.23■□□□□ 0.35
CHEK2-210ENST00000416671 ITSN1Q15811 1721 aa17.22■□□□□ 0.35
CHEK2-210ENST00000416671 NFE2L2Q16236 605 aa17.22■□□□□ 0.35
CHEK2-210ENST00000416671 IL16Q14005 1332 aa17.22■□□□□ 0.35
CHEK2-210ENST00000416671 FAM83GA6ND36 823 aa17.21■□□□□ 0.35
CHEK2-210ENST00000416671 ELL2O00472 640 aaPredicted RBP17.21■□□□□ 0.35
CHEK2-210ENST00000416671 CCDC173Q0VFZ6 552 aa17.21■□□□□ 0.35
CHEK2-210ENST00000416671 CIZ1Q9ULV3 898 aaPredicted RBP17.21■□□□□ 0.35
CHEK2-210ENST00000416671 RGPD8O14715 1765 aaPredicted RBP17.21■□□□□ 0.35
CHEK2-210ENST00000416671 AKAP12Q02952 1782 aa17.21■□□□□ 0.35
CHEK2-210ENST00000416671 TTC21BQ7Z4L5 1316 aa17.21■□□□□ 0.35
CHEK2-210ENST00000416671 ITPRIPQ8IWB1 547 aa17.21■□□□□ 0.35
CHEK2-210ENST00000416671 AATKQ6ZMQ8 1374 aa17.2■□□□□ 0.34
CHEK2-210ENST00000416671 PIK3R4Q99570 1358 aa17.2■□□□□ 0.34
CHEK2-210ENST00000416671 CHD2O14647 1828 aaKnown RBP17.2■□□□□ 0.34
CHEK2-210ENST00000416671 CDK12Q9NYV4 1490 aaPredicted RBP17.2■□□□□ 0.34
CHEK2-210ENST00000416671 CT47B1P0C2W7 299 aaPredicted RBP17.2■□□□□ 0.34
CHEK2-210ENST00000416671 DCTN1Q14203 1278 aa17.2■□□□□ 0.34
CHEK2-210ENST00000416671 SNX21Q969T3 373 aa17.2■□□□□ 0.34
CHEK2-210ENST00000416671 AEBP1Q8IUX7 1158 aa17.2■□□□□ 0.34
CHEK2-210ENST00000416671 SMC5Q8IY18 1101 aa17.2■□□□□ 0.34
CHEK2-210ENST00000416671 ATF7IPQ6VMQ6 1270 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms