RNA–Protein interactions for RNA: ENST00000416529.5

RBM39-209, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-209ENST00000416529 SLC26A8Q96RN1 970 aa10.86□□□□□ -0.67
RBM39-209ENST00000416529 AMOTL2Q9Y2J4 779 aa10.86□□□□□ -0.67
RBM39-209ENST00000416529 ROCK2O75116 1388 aaKnown RBP10.86□□□□□ -0.67
RBM39-209ENST00000416529 SBNO2Q9Y2G9 1366 aa10.86□□□□□ -0.67
RBM39-209ENST00000416529 PPP1R15BQ5SWA1 713 aa10.85□□□□□ -0.67
RBM39-209ENST00000416529 PUS7Q96PZ0 661 aaKnown RBP10.85□□□□□ -0.67
RBM39-209ENST00000416529 METP08581 1390 aa10.85□□□□□ -0.67
RBM39-209ENST00000416529 PPP4R3BQ5MIZ7 849 aa10.84□□□□□ -0.67
RBM39-209ENST00000416529 NUTM2DQ5VT03 806 aaPredicted RBP10.84□□□□□ -0.67
RBM39-209ENST00000416529 C19orf44Q9H6X5 657 aa10.83□□□□□ -0.68
RBM39-209ENST00000416529 ARHGAP33O14559 1287 aa10.82□□□□□ -0.68
RBM39-209ENST00000416529 PROSER2Q86WR7 435 aaPredicted RBP10.82□□□□□ -0.68
RBM39-209ENST00000416529 CARD11Q9BXL7 1154 aa10.82□□□□□ -0.68
RBM39-209ENST00000416529 ASXL1Q8IXJ9 1541 aa10.81□□□□□ -0.68
RBM39-209ENST00000416529 LRRC7Q96NW7 1537 aa10.81□□□□□ -0.68
RBM39-209ENST00000416529 NBPF8Q3BBV2 869 aa10.81□□□□□ -0.68
RBM39-209ENST00000416529 CDCA8Q53HL2 280 aa10.81□□□□□ -0.68
RBM39-209ENST00000416529 CADPS2Q86UW7 1296 aa10.81□□□□□ -0.68
RBM39-209ENST00000416529 OXER1Q8TDS5 423 aa10.81□□□□□ -0.68
RBM39-209ENST00000416529 PTPRUQ92729 1446 aa10.81□□□□□ -0.68
RBM39-209ENST00000416529 MSH6P52701 1360 aa10.8□□□□□ -0.68
RBM39-209ENST00000416529 ADGRL3Q9HAR2 1447 aa10.8□□□□□ -0.68
RBM39-209ENST00000416529 ADGRB2O60241 1585 aa10.79□□□□□ -0.68
RBM39-209ENST00000416529 DDX27Q96GQ7 796 aaKnown RBP10.79□□□□□ -0.68
RBM39-209ENST00000416529 POGKQ9P215 609 aa10.79□□□□□ -0.68
RBM39-209ENST00000416529 CENPJQ9HC77 1338 aaPredicted RBP10.79□□□□□ -0.68
RBM39-209ENST00000416529 TMEM94Q12767 1356 aa10.78□□□□□ -0.68
RBM39-209ENST00000416529 ROBO2Q9HCK4 1378 aa10.78□□□□□ -0.68
RBM39-209ENST00000416529 EIF4G2P78344 907 aaKnown RBP eCLIP10.78□□□□□ -0.68
RBM39-209ENST00000416529 CDC42BPGQ6DT37 1551 aa10.77□□□□□ -0.68
RBM39-209ENST00000416529 ANKARQ7Z5J8 1434 aa10.77□□□□□ -0.68
RBM39-209ENST00000416529 NBPF1Q3BBV0 1214 aa10.77□□□□□ -0.69
RBM39-209ENST00000416529 AMER1Q5JTC6 1135 aaPredicted RBP10.77□□□□□ -0.69
RBM39-209ENST00000416529 TMEM132EQ6IEE7 984 aa10.77□□□□□ -0.69
RBM39-209ENST00000416529 LARP6Q9BRS8 491 aaKnown RBP10.77□□□□□ -0.69
RBM39-209ENST00000416529 ARHGEF28Q8N1W1 1705 aaKnown RBP10.77□□□□□ -0.69
RBM39-209ENST00000416529 STRCP1A6NGW2 1772 aa10.77□□□□□ -0.69
RBM39-209ENST00000416529 TK2O00142 265 aa10.76□□□□□ -0.69
RBM39-209ENST00000416529 ATF3P18847 181 aa10.76□□□□□ -0.69
RBM39-209ENST00000416529 UPF1Q92900 1129 aaKnown RBP eCLIP10.76□□□□□ -0.69
RBM39-209ENST00000416529 RGS17Q9UGC6 210 aaPredicted RBP10.76□□□□□ -0.69
RBM39-209ENST00000416529 NINLQ9Y2I6 1382 aa10.76□□□□□ -0.69
RBM39-209ENST00000416529 POTEAQ6S8J7 498 aa10.75□□□□□ -0.69
RBM39-209ENST00000416529 PRAM1Q96QH2 718 aa10.75□□□□□ -0.69
RBM39-209ENST00000416529 TRAK1Q9UPV9 953 aa10.75□□□□□ -0.69
RBM39-209ENST00000416529 AXIN2Q9Y2T1 843 aa10.75□□□□□ -0.69
RBM39-209ENST00000416529 EVC2Q86UK5 1308 aa10.75□□□□□ -0.69
RBM39-209ENST00000416529 BRD4O60885 1362 aaPredicted RBP10.75□□□□□ -0.69
RBM39-209ENST00000416529 USP47Q96K76 1375 aa10.75□□□□□ -0.69
RBM39-209ENST00000416529 MFSD10Q14728 455 aa10.74□□□□□ -0.69
RBM39-209ENST00000416529 BBXQ8WY36 941 aaPredicted RBP10.74□□□□□ -0.69
RBM39-209ENST00000416529 STK26Q9P289 416 aa10.74□□□□□ -0.69
RBM39-209ENST00000416529 ADGRD1Q6QNK2 874 aa10.73□□□□□ -0.69
RBM39-209ENST00000416529 POTEEQ6S8J3 1075 aa10.73□□□□□ -0.69
RBM39-209ENST00000416529 C14orf37Q86TY3 774 aa10.73□□□□□ -0.69
RBM39-209ENST00000416529 ATAD2Q6PL18 1390 aa10.73□□□□□ -0.69
RBM39-209ENST00000416529 WASLO00401 505 aaPredicted RBP10.72□□□□□ -0.69
RBM39-209ENST00000416529 TMF1P82094 1093 aa10.72□□□□□ -0.69
RBM39-209ENST00000416529 XIRP1Q702N8 1843 aaKnown RBP10.72□□□□□ -0.69
RBM39-209ENST00000416529 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.71□□□□□ -0.69
RBM39-209ENST00000416529 TULP4Q9NRJ4 1543 aa10.7□□□□□ -0.7
RBM39-209ENST00000416529 WAPLQ7Z5K2 1190 aa10.7□□□□□ -0.7
RBM39-209ENST00000416529 ZNF454Q8N9F8 522 aa10.7□□□□□ -0.7
RBM39-209ENST00000416529 TESK2Q96S53 571 aa10.7□□□□□ -0.7
RBM39-209ENST00000416529 SLAIN2Q9P270 581 aa10.7□□□□□ -0.7
RBM39-209ENST00000416529 NALCNQ8IZF0 1738 aa10.7□□□□□ -0.7
RBM39-209ENST00000416529 QRICH2Q9H0J4 1663 aa10.69□□□□□ -0.7
RBM39-209ENST00000416529 ST20-MTHFSA0A0A6YYL1 179 aa10.69□□□□□ -0.7
RBM39-209ENST00000416529 MAP3K9P80192 1104 aa10.69□□□□□ -0.7
RBM39-209ENST00000416529 ANO8Q9HCE9 1232 aaPredicted RBP10.69□□□□□ -0.7
RBM39-209ENST00000416529 ITSN1Q15811 1721 aa10.69□□□□□ -0.7
RBM39-209ENST00000416529 FMN2Q9NZ56 1722 aa10.69□□□□□ -0.7
RBM39-209ENST00000416529 MST1RQ04912 1400 aa10.68□□□□□ -0.7
RBM39-209ENST00000416529 PLEKHG3A1L390 1219 aa10.68□□□□□ -0.7
RBM39-209ENST00000416529 MEX3CQ5U5Q3 659 aaKnown RBP10.68□□□□□ -0.7
RBM39-209ENST00000416529 RBM33Q96EV2 1170 aaKnown RBP10.68□□□□□ -0.7
RBM39-209ENST00000416529 KIF1AQ12756 1690 aa10.68□□□□□ -0.7
RBM39-209ENST00000416529 PLEKHH1Q9ULM0 1364 aa10.67□□□□□ -0.7
RBM39-209ENST00000416529 EVI5O60447 810 aa10.67□□□□□ -0.7
RBM39-209ENST00000416529 KCNK17Q96T54 332 aa10.67□□□□□ -0.7
RBM39-209ENST00000416529 BCL2L12Q9HB09 334 aa10.67□□□□□ -0.7
RBM39-209ENST00000416529 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.67□□□□□ -0.7
RBM39-209ENST00000416529 C1orf167Q5SNV9 1468 aa10.67□□□□□ -0.7
RBM39-209ENST00000416529 NPHP3Q7Z494 1330 aa10.66□□□□□ -0.7
RBM39-209ENST00000416529 PSEN2P49810 448 aa10.66□□□□□ -0.7
RBM39-209ENST00000416529 FOSBP53539 338 aa10.66□□□□□ -0.7
RBM39-209ENST00000416529 CDK19Q9BWU1 502 aa10.66□□□□□ -0.7
RBM39-209ENST00000416529 MINK1Q8N4C8 1332 aaPredicted RBP10.65□□□□□ -0.7
RBM39-209ENST00000416529 HSPA5P11021 654 aaKnown RBP10.65□□□□□ -0.7
RBM39-209ENST00000416529 PTPREP23469 700 aa10.65□□□□□ -0.7
RBM39-209ENST00000416529 HCSTQ9UBK5 93 aa10.65□□□□□ -0.7
RBM39-209ENST00000416529 POLR3AO14802 1390 aaPredicted RBP10.65□□□□□ -0.71
RBM39-209ENST00000416529 ATP7BP35670 1465 aa10.64□□□□□ -0.71
RBM39-209ENST00000416529 SRPK2P78362 688 aaKnown RBP10.64□□□□□ -0.71
RBM39-209ENST00000416529 PSME1Q06323 249 aa10.64□□□□□ -0.71
RBM39-209ENST00000416529 DMRTA1Q5VZB9 504 aa10.64□□□□□ -0.71
RBM39-209ENST00000416529 NUDT16Q96DE0 195 aaKnown RBP10.64□□□□□ -0.71
RBM39-209ENST00000416529 SLC4A5Q9BY07 1137 aa10.64□□□□□ -0.71
RBM39-209ENST00000416529 TERF2IPQ9NYB0 399 aa10.64□□□□□ -0.71
RBM39-209ENST00000416529 AHDC1Q5TGY3 1603 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms