RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 CALD1Q05682 793 aaKnown RBP22.52■■□□□ 1.2
SCARB1-203ENST00000415380 KIF2CQ99661 725 aa22.52■■□□□ 1.2
SCARB1-203ENST00000415380 ATP7BP35670 1465 aa22.52■■□□□ 1.19
SCARB1-203ENST00000415380 IFT57Q9NWB7 429 aa22.51■■□□□ 1.19
SCARB1-203ENST00000415380 GNAI1P63096 354 aa22.51■■□□□ 1.19
SCARB1-203ENST00000415380 OSCARQ8IYS5 282 aa22.51■■□□□ 1.19
SCARB1-203ENST00000415380 HSP90AB1P08238 724 aaKnown RBP22.51■■□□□ 1.19
SCARB1-203ENST00000415380 WAPLQ7Z5K2 1190 aa22.51■■□□□ 1.19
SCARB1-203ENST00000415380 SIRT2Q8IXJ6 389 aa22.51■■□□□ 1.19
SCARB1-203ENST00000415380 ELL2O00472 640 aaPredicted RBP22.5■■□□□ 1.19
SCARB1-203ENST00000415380 MBIPQ9NS73 344 aa22.5■■□□□ 1.19
SCARB1-203ENST00000415380 EMILIN1Q9Y6C2 1016 aa22.5■■□□□ 1.19
SCARB1-203ENST00000415380 ABCC4O15439 1325 aa22.5■■□□□ 1.19
SCARB1-203ENST00000415380 MAP2P11137 1827 aaKnown RBP22.49■■□□□ 1.19
SCARB1-203ENST00000415380 ZNF853P0CG23 659 aa22.49■■□□□ 1.19
SCARB1-203ENST00000415380 TNPO1Q92973 898 aaKnown RBP22.49■■□□□ 1.19
SCARB1-203ENST00000415380 EIF5BO60841 1220 aaKnown RBP22.49■■□□□ 1.19
SCARB1-203ENST00000415380 IL13P35225 146 aa22.49■■□□□ 1.19
SCARB1-203ENST00000415380 STAG3Q9UJ98 1225 aa22.49■■□□□ 1.19
SCARB1-203ENST00000415380 TBC1D9Q6ZT07 1266 aa22.48■■□□□ 1.19
SCARB1-203ENST00000415380 CIZ1Q9ULV3 898 aaPredicted RBP22.48■■□□□ 1.19
SCARB1-203ENST00000415380 MRE11P49959 708 aa22.47■■□□□ 1.19
SCARB1-203ENST00000415380 DLC1Q96QB1 1528 aa22.47■■□□□ 1.19
SCARB1-203ENST00000415380 CD2BP2O95400 341 aaKnown RBP22.46■■□□□ 1.19
SCARB1-203ENST00000415380 TWISTNBQ3B726 338 aaPredicted RBP22.46■■□□□ 1.19
SCARB1-203ENST00000415380 RAB3GAP1Q15042 981 aa22.45■■□□□ 1.19
SCARB1-203ENST00000415380 PRKCSHP14314 528 aaPredicted RBP22.45■■□□□ 1.18
SCARB1-203ENST00000415380 NME9Q86XW9 330 aa22.44■■□□□ 1.18
SCARB1-203ENST00000415380 C8orf58Q8NAV2 365 aa22.44■■□□□ 1.18
SCARB1-203ENST00000415380 CDK12Q9NYV4 1490 aaPredicted RBP22.44■■□□□ 1.18
SCARB1-203ENST00000415380 EDC4Q6P2E9 1401 aaKnown RBP22.43■■□□□ 1.18
SCARB1-203ENST00000415380 CFAP44Q96MT7 982 aa22.43■■□□□ 1.18
SCARB1-203ENST00000415380 GRPEL1Q9HAV7 217 aa22.43■■□□□ 1.18
SCARB1-203ENST00000415380 ZRANB1Q9UGI0 708 aa22.43■■□□□ 1.18
SCARB1-203ENST00000415380 CPSF1Q10570 1443 aaKnown RBP22.43■■□□□ 1.18
SCARB1-203ENST00000415380 GBP4Q96PP9 640 aa22.43■■□□□ 1.18
SCARB1-203ENST00000415380 K7ELQ4 463 aaPredicted RBP22.42■■□□□ 1.18
SCARB1-203ENST00000415380 RBM42Q9BTD8 480 aaKnown RBP22.42■■□□□ 1.18
SCARB1-203ENST00000415380 FOXD4L1Q9NU39 408 aa22.42■■□□□ 1.18
SCARB1-203ENST00000415380 API5Q9BZZ5 524 aaKnown RBP22.42■■□□□ 1.18
SCARB1-203ENST00000415380 HSP90AA1P07900 732 aaKnown RBP22.41■■□□□ 1.18
SCARB1-203ENST00000415380 RIMBP3CA6NJZ7 1639 aa22.41■■□□□ 1.18
SCARB1-203ENST00000415380 RIMBP3BA6NNM3 1639 aa22.41■■□□□ 1.18
SCARB1-203ENST00000415380 RIMBP3Q9UFD9 1639 aa22.41■■□□□ 1.18
SCARB1-203ENST00000415380 REREQ9P2R6 1566 aa22.41■■□□□ 1.18
SCARB1-203ENST00000415380 LMOD3Q0VAK6 560 aa22.41■■□□□ 1.18
SCARB1-203ENST00000415380 FAM83GA6ND36 823 aa22.4■■□□□ 1.18
SCARB1-203ENST00000415380 CDC45O75419 566 aa22.4■■□□□ 1.18
SCARB1-203ENST00000415380 ISY1Q9ULR0 285 aaKnown RBP22.4■■□□□ 1.18
SCARB1-203ENST00000415380 RIMS2Q9UQ26 1411 aa22.4■■□□□ 1.18
SCARB1-203ENST00000415380 DLG5Q8TDM6 1919 aa22.4■■□□□ 1.18
SCARB1-203ENST00000415380 AATKQ6ZMQ8 1374 aa22.4■■□□□ 1.18
SCARB1-203ENST00000415380 SETD1AO15047 1707 aaKnown RBP22.39■■□□□ 1.17
SCARB1-203ENST00000415380 GSPT1P15170 499 aaKnown RBP22.39■■□□□ 1.17
SCARB1-203ENST00000415380 A2ML1A8K2U0 1454 aa22.39■■□□□ 1.17
SCARB1-203ENST00000415380 WASLO00401 505 aaPredicted RBP22.38■■□□□ 1.17
SCARB1-203ENST00000415380 KNDC1Q76NI1 1749 aa22.38■■□□□ 1.17
SCARB1-203ENST00000415380 DCTN1Q14203 1278 aa22.37■■□□□ 1.17
SCARB1-203ENST00000415380 RRS1Q15050 365 aaKnown RBP22.37■■□□□ 1.17
SCARB1-203ENST00000415380 PLEKHM2Q8IWE5 1019 aa22.37■■□□□ 1.17
SCARB1-203ENST00000415380 KIF24Q5T7B8 1368 aa22.37■■□□□ 1.17
SCARB1-203ENST00000415380 GAS2L2Q8NHY3 880 aa22.37■■□□□ 1.17
SCARB1-203ENST00000415380 SKOR2Q2VWA4 1001 aaPredicted RBP22.36■■□□□ 1.17
SCARB1-203ENST00000415380 COG3Q96JB2 828 aa22.36■■□□□ 1.17
SCARB1-203ENST00000415380 CLCN1P35523 988 aa22.35■■□□□ 1.17
SCARB1-203ENST00000415380 GAS2L3Q86XJ1 694 aa22.35■■□□□ 1.17
SCARB1-203ENST00000415380 DCTPP1Q9H773 170 aa22.35■■□□□ 1.17
SCARB1-203ENST00000415380 CPS1P31327 1500 aa22.35■■□□□ 1.17
SCARB1-203ENST00000415380 PTMSP20962 102 aa22.35■■□□□ 1.17
SCARB1-203ENST00000415380 NCKAP5LQ9HCH0 1330 aa22.34■■□□□ 1.17
SCARB1-203ENST00000415380 SSFA2P28290 1259 aa22.33■■□□□ 1.17
SCARB1-203ENST00000415380 NUDT16Q96DE0 195 aaKnown RBP22.33■■□□□ 1.16
SCARB1-203ENST00000415380 TTC22Q5TAA0 569 aa22.32■■□□□ 1.16
SCARB1-203ENST00000415380 INTS3Q68E01 1043 aaKnown RBP22.32■■□□□ 1.16
SCARB1-203ENST00000415380 C16orf71Q8IYS4 520 aaPredicted RBP22.31■■□□□ 1.16
SCARB1-203ENST00000415380 MON2Q7Z3U7 1717 aa22.3■■□□□ 1.16
SCARB1-203ENST00000415380 METP08581 1390 aa22.3■■□□□ 1.16
SCARB1-203ENST00000415380 TXNDC2Q86VQ3 553 aa22.3■■□□□ 1.16
SCARB1-203ENST00000415380 ANKRD44Q8N8A2 993 aa22.3■■□□□ 1.16
SCARB1-203ENST00000415380 ATP10DQ9P241 1426 aa22.29■■□□□ 1.16
SCARB1-203ENST00000415380 SPATA31D1Q6ZQQ2 1576 aa22.29■■□□□ 1.16
SCARB1-203ENST00000415380 RGS12O14924 1447 aa22.29■■□□□ 1.16
SCARB1-203ENST00000415380 NRXN3Q9Y4C0 1643 aa22.29■■□□□ 1.16
SCARB1-203ENST00000415380 RABEP1Q15276 862 aa22.29■■□□□ 1.16
SCARB1-203ENST00000415380 CLEC17AQ6ZS10 378 aa22.29■■□□□ 1.16
SCARB1-203ENST00000415380 KRT24Q2M2I5 525 aa22.28■■□□□ 1.16
SCARB1-203ENST00000415380 CCDC61Q9Y6R9 512 aa22.28■■□□□ 1.16
SCARB1-203ENST00000415380 AEBP1Q8IUX7 1158 aa22.28■■□□□ 1.16
SCARB1-203ENST00000415380 OTUD7AQ8TE49 926 aaPredicted RBP22.27■■□□□ 1.16
SCARB1-203ENST00000415380 USP26Q9BXU7 913 aa22.27■■□□□ 1.16
SCARB1-203ENST00000415380 C3P01024 1663 aa22.26■■□□□ 1.15
SCARB1-203ENST00000415380 GOLGA6L22H0YM25 854 aa22.26■■□□□ 1.15
SCARB1-203ENST00000415380 BAG4O95429 457 aaKnown RBP22.26■■□□□ 1.15
SCARB1-203ENST00000415380 CEP85Q6P2H3 762 aa22.26■■□□□ 1.15
SCARB1-203ENST00000415380 RPAP2Q8IXW5 612 aaPredicted RBP22.25■■□□□ 1.15
SCARB1-203ENST00000415380 PPP6R1Q9UPN7 881 aa22.25■■□□□ 1.15
SCARB1-203ENST00000415380 NRKQ7Z2Y5 1582 aa22.25■■□□□ 1.15
SCARB1-203ENST00000415380 ESPNB1AK53 854 aa22.25■■□□□ 1.15
SCARB1-203ENST00000415380 SULT6B1Q6IMI4 303 aa22.25■■□□□ 1.15
SCARB1-203ENST00000415380 ERBB4Q15303 1308 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms