RNA–Protein interactions for RNA: ENST00000414510.5

PTPA-210, Transcript of protein phosphatase 2 phosphatase activator, human

TSL 1 (best) BASIC

Gene PTPA, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPA-210	ENST00000414510	UPF1	Q92900	1129 aa	Known RBP eCLIP	33.89	■■■■□ 3.02	6e-40	■■■■■ 94.3
PTPA-210	ENST00000414510		A0A0G2JS52	829 aa		33.87	■■■■□ 3.01
PTPA-210	ENST00000414510	MYT1	Q01538	1121 aa		33.87	■■■■□ 3.01
PTPA-210	ENST00000414510	ONECUT3	O60422	494 aa	Predicted RBP	33.86	■■■■□ 3.01
PTPA-210	ENST00000414510	USP35	Q9P2H5	1018 aa		33.86	■■■■□ 3.01
PTPA-210	ENST00000414510	AXIN2	Q9Y2T1	843 aa		33.86	■■■■□ 3.01
PTPA-210	ENST00000414510	NSD3	Q9BZ95	1437 aa		33.84	■■■■□ 3.01
PTPA-210	ENST00000414510	C11orf95	C9JLR9	678 aa	Predicted RBP	33.83	■■■■□ 3.01
PTPA-210	ENST00000414510	CARD14	Q9BXL6	1004 aa		33.83	■■■■□ 3.01
PTPA-210	ENST00000414510	ABCC6	O95255	1503 aa		33.83	■■■■□ 3.01
PTPA-210	ENST00000414510	COG3	Q96JB2	828 aa		33.81	■■■■□ 3
PTPA-210	ENST00000414510	GGNBP2	Q9H3C7	697 aa		33.81	■■■■□ 3
PTPA-210	ENST00000414510	CRB1	P82279	1406 aa		33.79	■■■■□ 3
PTPA-210	ENST00000414510	FYB1	O15117	783 aa		33.79	■■■■□ 3
PTPA-210	ENST00000414510	WNK3	Q9BYP7	1800 aa		33.76	■■■■□ 3
PTPA-210	ENST00000414510	FBLN1	P23142	703 aa		33.75	■■■□□ 2.99
PTPA-210	ENST00000414510	KRT27	Q7Z3Y8	459 aa		33.75	■■■□□ 2.99
PTPA-210	ENST00000414510	TCP11L2	Q8N4U5	519 aa		33.74	■■■□□ 2.99
PTPA-210	ENST00000414510	WDR17	Q8IZU2	1322 aa		33.74	■■■□□ 2.99
PTPA-210	ENST00000414510	TOM1L2	Q6ZVM7	507 aa		33.73	■■■□□ 2.99
PTPA-210	ENST00000414510	BARGIN	Q6ZT62	677 aa		33.72	■■■□□ 2.99
PTPA-210	ENST00000414510	CSB-PGBD3	P0DP91	1061 aa		33.7	■■■□□ 2.99
PTPA-210	ENST00000414510	KIF7	Q2M1P5	1343 aa		33.7	■■■□□ 2.99
PTPA-210	ENST00000414510	PARP4	Q9UKK3	1724 aa	Known RBP	33.7	■■■□□ 2.98
PTPA-210	ENST00000414510	FAM182B	Q5T319	152 aa		33.68	■■■□□ 2.98
PTPA-210	ENST00000414510	MAP3K19	Q56UN5	1328 aa		33.68	■■■□□ 2.98
PTPA-210	ENST00000414510	THRAP3	Q9Y2W1	955 aa	Known RBP	33.67	■■■□□ 2.98
PTPA-210	ENST00000414510	LRRC37A3	O60309	1634 aa		33.67	■■■□□ 2.98
PTPA-210	ENST00000414510	ANKRD26	Q9UPS8	1709 aa		33.67	■■■□□ 2.98
PTPA-210	ENST00000414510	EP400	Q96L91	3159 aa		33.66	■■■□□ 2.98
PTPA-210	ENST00000414510	ERBB3	P21860	1342 aa		33.66	■■■□□ 2.98
PTPA-210	ENST00000414510	PANK3	Q9H999	370 aa		33.66	■■■□□ 2.98
PTPA-210	ENST00000414510	RRS1	Q15050	365 aa	Known RBP	33.65	■■■□□ 2.98
PTPA-210	ENST00000414510	BLM	P54132	1417 aa	Predicted RBP	33.64	■■■□□ 2.98
PTPA-210	ENST00000414510	PEAK1	Q9H792	1746 aa		33.64	■■■□□ 2.98
PTPA-210	ENST00000414510	CGNL1	Q0VF96	1302 aa		33.63	■■■□□ 2.97
PTPA-210	ENST00000414510	ANKRD24	Q8TF21	1146 aa		33.63	■■■□□ 2.97
PTPA-210	ENST00000414510	IP6K1	Q92551	441 aa		33.62	■■■□□ 2.97
PTPA-210	ENST00000414510	CARD10	Q9BWT7	1032 aa		33.61	■■■□□ 2.97
PTPA-210	ENST00000414510	HOXC9	P31274	260 aa		33.6	■■■□□ 2.97
PTPA-210	ENST00000414510	FAM208A	Q9UK61	1670 aa	Known RBP	33.6	■■■□□ 2.97
PTPA-210	ENST00000414510	AMPH	P49418	695 aa		33.59	■■■□□ 2.97
PTPA-210	ENST00000414510	RGPD2	P0DJD1	1756 aa		33.59	■■■□□ 2.97
PTPA-210	ENST00000414510	LTV1	Q96GA3	475 aa	Predicted RBP	33.58	■■■□□ 2.97
PTPA-210	ENST00000414510	DISP2	A7MBM2	1401 aa		33.58	■■■□□ 2.97
PTPA-210	ENST00000414510	RTL1	A6NKG5	1358 aa		33.58	■■■□□ 2.97
PTPA-210	ENST00000414510	NLRP2	Q9NX02	1062 aa		33.57	■■■□□ 2.96
PTPA-210	ENST00000414510	CCDC7	Q96M83	1385 aa		33.57	■■■□□ 2.96
PTPA-210	ENST00000414510	RGPD1	P0DJD0	1748 aa		33.53	■■■□□ 2.96
PTPA-210	ENST00000414510	PDE3B	Q13370	1112 aa		33.53	■■■□□ 2.96
PTPA-210	ENST00000414510	MAP2	P11137	1827 aa	Known RBP	33.53	■■■□□ 2.96
PTPA-210	ENST00000414510	TNS1	Q9HBL0	1735 aa	Known RBP	33.52	■■■□□ 2.96
PTPA-210	ENST00000414510	CCDC125	Q86Z20	511 aa		33.51	■■■□□ 2.95
PTPA-210	ENST00000414510	EMILIN1	Q9Y6C2	1016 aa		33.51	■■■□□ 2.95
PTPA-210	ENST00000414510	WASHC2A	Q641Q2	1341 aa		33.51	■■■□□ 2.95
PTPA-210	ENST00000414510	DDB1	Q16531	1140 aa		33.49	■■■□□ 2.95
PTPA-210	ENST00000414510	FLT4	P35916	1363 aa		33.48	■■■□□ 2.95
PTPA-210	ENST00000414510	TNNT2	P45379	298 aa	Predicted RBP	33.46	■■■□□ 2.95
PTPA-210	ENST00000414510	CDCA7	Q9BWT1	371 aa	Predicted RBP	33.46	■■■□□ 2.95
PTPA-210	ENST00000414510	NSD2	O96028	1365 aa		33.46	■■■□□ 2.95
PTPA-210	ENST00000414510	HSP90AB2P	Q58FF8	381 aa		33.45	■■■□□ 2.95
PTPA-210	ENST00000414510	FAM196A	Q6ZSG2	479 aa		33.45	■■■□□ 2.95
PTPA-210	ENST00000414510	DEFB132	Q7Z7B7	95 aa		33.45	■■■□□ 2.95
PTPA-210	ENST00000414510	TNS2	Q63HR2	1409 aa		33.45	■■■□□ 2.94
PTPA-210	ENST00000414510	SF3B2	Q13435	895 aa	Known RBP	33.44	■■■□□ 2.94
PTPA-210	ENST00000414510	KNSTRN	Q9Y448	316 aa		33.44	■■■□□ 2.94
PTPA-210	ENST00000414510	INSR	P06213	1382 aa		33.44	■■■□□ 2.94
PTPA-210	ENST00000414510	KIF24	Q5T7B8	1368 aa		33.43	■■■□□ 2.94
PTPA-210	ENST00000414510	PPM1G	O15355	546 aa	Predicted RBP	33.42	■■■□□ 2.94
PTPA-210	ENST00000414510	OVOS2	A0A0G2JMS6	1433 aa		33.42	■■■□□ 2.94
PTPA-210	ENST00000414510	SMG6	Q86US8	1419 aa	Known RBP	33.42	■■■□□ 2.94
PTPA-210	ENST00000414510	IL2RB	P14784	551 aa		33.41	■■■□□ 2.94
PTPA-210	ENST00000414510	SBF2	Q86WG5	1849 aa		33.41	■■■□□ 2.94
PTPA-210	ENST00000414510	TRIM37	O94972	964 aa		33.4	■■■□□ 2.94
PTPA-210	ENST00000414510	MARCH10	Q8NA82	808 aa	Predicted RBP	33.39	■■■□□ 2.94
PTPA-210	ENST00000414510	POLK	Q9UBT6	870 aa		33.39	■■■□□ 2.94
PTPA-210	ENST00000414510	AMER1	Q5JTC6	1135 aa	Predicted RBP	33.38	■■■□□ 2.93
PTPA-210	ENST00000414510	USHBP1	Q8N6Y0	703 aa		33.38	■■■□□ 2.93
PTPA-210	ENST00000414510	EXOC5	O00471	708 aa		33.37	■■■□□ 2.93
PTPA-210	ENST00000414510	NBPF6	Q5VWK0	638 aa		33.37	■■■□□ 2.93
PTPA-210	ENST00000414510	NBPF4	Q96M43	638 aa		33.37	■■■□□ 2.93
PTPA-210	ENST00000414510	MEGF6	O75095	1541 aa		33.35	■■■□□ 2.93
PTPA-210	ENST00000414510	MORC1	Q86VD1	984 aa		33.35	■■■□□ 2.93
PTPA-210	ENST00000414510	SHANK3	Q9BYB0	1731 aa		33.34	■■■□□ 2.93
PTPA-210	ENST00000414510	PER1	O15534	1290 aa	Predicted RBP	33.34	■■■□□ 2.93
PTPA-210	ENST00000414510	BAG6	P46379	1132 aa		33.33	■■■□□ 2.93
PTPA-210	ENST00000414510	EN1	Q05925	392 aa	Predicted RBP	33.3	■■■□□ 2.92
PTPA-210	ENST00000414510	CC2D1B	Q5T0F9	858 aa	Known RBP	33.27	■■■□□ 2.92
PTPA-210	ENST00000414510	BCL9	O00512	1426 aa		33.27	■■■□□ 2.92
PTPA-210	ENST00000414510	APBA3	O96018	575 aa		33.26	■■■□□ 2.91
PTPA-210	ENST00000414510	PTF1A	Q7RTS3	328 aa		33.26	■■■□□ 2.91
PTPA-210	ENST00000414510	CNGB1	Q14028	1251 aa	Predicted RBP	33.25	■■■□□ 2.91
PTPA-210	ENST00000414510	NHS	Q6T4R5	1651 aa		33.24	■■■□□ 2.91
PTPA-210	ENST00000414510	NCAPD2	Q15021	1401 aa		33.24	■■■□□ 2.91
PTPA-210	ENST00000414510	EIF4A2	Q14240	407 aa	Known RBP	33.23	■■■□□ 2.91
PTPA-210	ENST00000414510	EZH2	Q15910	746 aa	Known RBP	33.22	■■■□□ 2.91
PTPA-210	ENST00000414510	RREB1	Q92766	1687 aa		33.22	■■■□□ 2.91
PTPA-210	ENST00000414510	DDX54	Q8TDD1	881 aa	Known RBP	33.2	■■■□□ 2.91
PTPA-210	ENST00000414510	RAPGEF4	Q8WZA2	1011 aa		33.2	■■■□□ 2.91
PTPA-210	ENST00000414510	EYA1	Q99502	592 aa		33.2	■■■□□ 2.91

Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms