RNA–Protein interactions for RNA: ENST00000413358.6

HCG18-234, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 916 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-234ENST00000413358 USP31Q70CQ4 1352 aa12.11□□□□□ -0.47
HCG18-234ENST00000413358 NLRP6P59044 892 aa12.11□□□□□ -0.47
HCG18-234ENST00000413358 PRDM11Q9NQV5 511 aa12.11□□□□□ -0.47
HCG18-234ENST00000413358 MYBBP1AQ9BQG0 1328 aaKnown RBP12.11□□□□□ -0.47
HCG18-234ENST00000413358 TNNT2P45379 298 aaPredicted RBP12.1□□□□□ -0.47
HCG18-234ENST00000413358 NUTM2GQ5VZR2 741 aa12.1□□□□□ -0.47
HCG18-234ENST00000413358 PLCH1Q4KWH8 1693 aa12.1□□□□□ -0.47
HCG18-234ENST00000413358 NLRP13Q86W25 1043 aa12.09□□□□□ -0.47
HCG18-234ENST00000413358 BRWD3Q6RI45 1802 aa12.09□□□□□ -0.47
HCG18-234ENST00000413358 SOX12O15370 315 aa12.08□□□□□ -0.48
HCG18-234ENST00000413358 EVA1CP58658 441 aa12.08□□□□□ -0.48
HCG18-234ENST00000413358 MIER1Q8N108 512 aa12.08□□□□□ -0.48
HCG18-234ENST00000413358 PHRF1Q9P1Y6 1649 aaKnown RBP12.08□□□□□ -0.48
HCG18-234ENST00000413358 SLIT3O75094 1523 aa12.07□□□□□ -0.48
HCG18-234ENST00000413358 PSDA5PKW4 1024 aaPredicted RBP12.07□□□□□ -0.48
HCG18-234ENST00000413358 STRN4Q9NRL3 753 aa12.07□□□□□ -0.48
HCG18-234ENST00000413358 USP19O94966 1318 aa12.07□□□□□ -0.48
HCG18-234ENST00000413358 SPATA31A5Q5VU36 1347 aa12.07□□□□□ -0.48
HCG18-234ENST00000413358 SPATA31A7Q8IWB4 1347 aa12.07□□□□□ -0.48
HCG18-234ENST00000413358 COL14A1Q05707 1796 aaKnown RBP12.06□□□□□ -0.48
HCG18-234ENST00000413358 PPP2R1AP30153 589 aa12.06□□□□□ -0.48
HCG18-234ENST00000413358 EN1Q05925 392 aaPredicted RBP12.06□□□□□ -0.48
HCG18-234ENST00000413358 AATKQ6ZMQ8 1374 aa12.05□□□□□ -0.48
HCG18-234ENST00000413358 FAM196AQ6ZSG2 479 aa12.05□□□□□ -0.48
HCG18-234ENST00000413358 KCNH5Q8NCM2 988 aa12.05□□□□□ -0.48
HCG18-234ENST00000413358 ABCA3Q99758 1704 aa12.05□□□□□ -0.48
HCG18-234ENST00000413358 NFAT5O94916 1531 aa12.05□□□□□ -0.48
HCG18-234ENST00000413358 EP400Q96L91 3159 aa12.04□□□□□ -0.48
HCG18-234ENST00000413358 SMG6Q86US8 1419 aaKnown RBP12.04□□□□□ -0.48
HCG18-234ENST00000413358 CRYBG1Q9Y4K1 1723 aa12.04□□□□□ -0.48
HCG18-234ENST00000413358 ZC3H6P61129 1189 aaKnown RBP12.04□□□□□ -0.48
HCG18-234ENST00000413358 PDE3BQ13370 1112 aa12.04□□□□□ -0.48
HCG18-234ENST00000413358 FAM182BQ5T319 152 aa12.04□□□□□ -0.48
HCG18-234ENST00000413358 ZBTB7CA1YPR0 619 aa12.03□□□□□ -0.48
HCG18-234ENST00000413358 CCER2I3L3R5 266 aa12.03□□□□□ -0.48
HCG18-234ENST00000413358 CHRNA2Q15822 529 aa12.03□□□□□ -0.48
HCG18-234ENST00000413358 CFAP53Q96M91 514 aa12.03□□□□□ -0.48
HCG18-234ENST00000413358 MRS2Q9HD23 443 aa12.03□□□□□ -0.48
HCG18-234ENST00000413358 USP35Q9P2H5 1018 aa12.03□□□□□ -0.48
HCG18-234ENST00000413358 SPATA31A1Q5TZJ5 1347 aa12.03□□□□□ -0.48
HCG18-234ENST00000413358 PPM1GO15355 546 aaPredicted RBP12.02□□□□□ -0.49
HCG18-234ENST00000413358 APBA3O96018 575 aa12.02□□□□□ -0.49
HCG18-234ENST00000413358 GCP02774 474 aa12.02□□□□□ -0.49
HCG18-234ENST00000413358 R3HDM1Q15032 1099 aaKnown RBP12.02□□□□□ -0.49
HCG18-234ENST00000413358 RRS1Q15050 365 aaKnown RBP12.02□□□□□ -0.49
HCG18-234ENST00000413358 NBPF14Q5TI25 921 aa12.02□□□□□ -0.49
HCG18-234ENST00000413358 RTL1A6NKG5 1358 aa12.02□□□□□ -0.49
HCG18-234ENST00000413358 KIAA0232Q92628 1395 aa12.02□□□□□ -0.49
HCG18-234ENST00000413358 LTN1O94822 1766 aa12.01□□□□□ -0.49
HCG18-234ENST00000413358 TRIM37O94972 964 aa12.01□□□□□ -0.49
HCG18-234ENST00000413358 MTHFSP49914 203 aa12.01□□□□□ -0.49
HCG18-234ENST00000413358 EMILIN1Q9Y6C2 1016 aa12.01□□□□□ -0.49
HCG18-234ENST00000413358 MAP3K19Q56UN5 1328 aa12.01□□□□□ -0.49
HCG18-234ENST00000413358 FLT4P35916 1363 aa12.01□□□□□ -0.49
HCG18-234ENST00000413358 RGPD1P0DJD0 1748 aa12□□□□□ -0.49
HCG18-234ENST00000413358 NRAPQ86VF7 1730 aa12□□□□□ -0.49
HCG18-234ENST00000413358 MAP2P11137 1827 aaKnown RBP12□□□□□ -0.49
HCG18-234ENST00000413358 FBLN1P23142 703 aa12□□□□□ -0.49
HCG18-234ENST00000413358 AMPHP49418 695 aa12□□□□□ -0.49
HCG18-234ENST00000413358 EZH2Q15910 746 aaKnown RBP12□□□□□ -0.49
HCG18-234ENST00000413358 BARGINQ6ZT62 677 aa12□□□□□ -0.49
HCG18-234ENST00000413358 POLKQ9UBT6 870 aa12□□□□□ -0.49
HCG18-234ENST00000413358 LRP5O75197 1615 aa12□□□□□ -0.49
HCG18-234ENST00000413358 PEAK1Q9H792 1746 aa12□□□□□ -0.49
HCG18-234ENST00000413358 TCP11L2Q8N4U5 519 aa11.99□□□□□ -0.49
HCG18-234ENST00000413358 KIF24Q5T7B8 1368 aa11.99□□□□□ -0.49
HCG18-234ENST00000413358 ABCC6O95255 1503 aa11.99□□□□□ -0.49
HCG18-234ENST00000413358 COL3A1P02461 1466 aaPredicted RBP11.98□□□□□ -0.49
HCG18-234ENST00000413358 CPDO75976 1380 aa11.98□□□□□ -0.49
HCG18-234ENST00000413358 DCAF8L1A6NGE4 600 aa11.98□□□□□ -0.49
HCG18-234ENST00000413358 THRAP3Q9Y2W1 955 aaKnown RBP11.98□□□□□ -0.49
HCG18-234ENST00000413358 SRCAPQ6ZRS2 3230 aa11.98□□□□□ -0.49
HCG18-234ENST00000413358 DISP2A7MBM2 1401 aa11.97□□□□□ -0.49
HCG18-234ENST00000413358 WDR43Q15061 677 aaKnown RBP eCLIP11.97□□□□□ -0.49
HCG18-234ENST00000413358 CAMKK2Q96RR4 588 aa11.97□□□□□ -0.49
HCG18-234ENST00000413358 HOXC9P31274 260 aa11.96□□□□□ -0.49
HCG18-234ENST00000413358 CCDC184Q52MB2 194 aa11.96□□□□□ -0.49
HCG18-234ENST00000413358 LARP1Q6PKG0 1096 aaKnown RBP11.96□□□□□ -0.49
HCG18-234ENST00000413358 ARHGEF25Q86VW2 580 aa11.96□□□□□ -0.49
HCG18-234ENST00000413358 INSRP06213 1382 aa11.95□□□□□ -0.5
HCG18-234ENST00000413358 THSD7AQ9UPZ6 1657 aa11.95□□□□□ -0.5
HCG18-234ENST00000413358 PPP1R1BQ9UD71 204 aaPredicted RBP11.95□□□□□ -0.5
HCG18-234ENST00000413358 NUDCQ9Y266 331 aa11.95□□□□□ -0.5
HCG18-234ENST00000413358 DIAPH1O60610 1272 aaKnown RBP11.94□□□□□ -0.5
HCG18-234ENST00000413358 IP6K1Q92551 441 aa11.94□□□□□ -0.5
HCG18-234ENST00000413358 U2SURPO15042 1029 aaKnown RBP11.93□□□□□ -0.5
HCG18-234ENST00000413358 HSP90AB2PQ58FF8 381 aa11.93□□□□□ -0.5
HCG18-234ENST00000413358 FAM9BQ8IZU0 186 aa11.93□□□□□ -0.5
HCG18-234ENST00000413358 LMO7Q8WWI1 1683 aa11.93□□□□□ -0.5
HCG18-234ENST00000413358 EIF4A2Q14240 407 aaKnown RBP11.92□□□□□ -0.5
HCG18-234ENST00000413358 TOM1L2Q6ZVM7 507 aa11.92□□□□□ -0.5
HCG18-234ENST00000413358 LTV1Q96GA3 475 aaPredicted RBP11.92□□□□□ -0.5
HCG18-234ENST00000413358 FAM208AQ9UK61 1670 aaKnown RBP11.91□□□□□ -0.5
HCG18-234ENST00000413358 U2AF1L5P0DN76 240 aaPredicted RBP11.91□□□□□ -0.5
HCG18-234ENST00000413358 CSB-PGBD3P0DP91 1061 aa11.91□□□□□ -0.5
HCG18-234ENST00000413358 U2AF1Q01081 240 aaKnown RBP eCLIP11.91□□□□□ -0.5
HCG18-234ENST00000413358 POTEDQ86YR6 584 aa11.91□□□□□ -0.5
HCG18-234ENST00000413358 ANKRD24Q8TF21 1146 aa11.91□□□□□ -0.5
HCG18-234ENST00000413358 SPON1Q9HCB6 807 aa11.91□□□□□ -0.5
HCG18-234ENST00000413358 COL18A1P39060 1754 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms