RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 SETD1BQ9UPS6 1966 aaKnown RBP31.58■■■□□ 2.65
VRK2-202ENST00000412104 EIF4A2Q14240 407 aaKnown RBP31.58■■■□□ 2.65
VRK2-202ENST00000412104 PDE4AP27815 886 aa31.57■■■□□ 2.64
VRK2-202ENST00000412104 SMC4Q9NTJ3 1288 aa31.57■■■□□ 2.64
VRK2-202ENST00000412104 RGPD1P0DJD0 1748 aa31.56■■■□□ 2.64
VRK2-202ENST00000412104 ZKSCAN2Q63HK3 967 aa31.56■■■□□ 2.64
VRK2-202ENST00000412104 AAMPQ13685 434 aa31.55■■■□□ 2.64
VRK2-202ENST00000412104 CALD1Q05682 793 aaKnown RBP31.54■■■□□ 2.64
VRK2-202ENST00000412104 SSH1Q8WYL5 1049 aa31.54■■■□□ 2.64
VRK2-202ENST00000412104 BACH2Q9BYV9 841 aa31.53■■■□□ 2.64
VRK2-202ENST00000412104 THUMPD2Q9BTF0 503 aaKnown RBP31.53■■■□□ 2.64
VRK2-202ENST00000412104 IGHDP01880 384 aa31.51■■■□□ 2.64
VRK2-202ENST00000412104 LMOD3Q0VAK6 560 aa31.51■■■□□ 2.63
VRK2-202ENST00000412104 SOX12O15370 315 aa31.5■■■□□ 2.63
VRK2-202ENST00000412104 HSP90AB2PQ58FF8 381 aa31.5■■■□□ 2.63
VRK2-202ENST00000412104 LAS1LQ9Y4W2 734 aaKnown RBP31.5■■■□□ 2.63
VRK2-202ENST00000412104 AEBP1Q8IUX7 1158 aa31.49■■■□□ 2.63
VRK2-202ENST00000412104 SULT6B1Q6IMI4 303 aa31.49■■■□□ 2.63
VRK2-202ENST00000412104 DZIP1LQ8IYY4 767 aaKnown RBP31.49■■■□□ 2.63
VRK2-202ENST00000412104 IFT57Q9NWB7 429 aa31.49■■■□□ 2.63
VRK2-202ENST00000412104 USP54Q70EL1 1684 aa31.49■■■□□ 2.63
VRK2-202ENST00000412104 MAP3K19Q56UN5 1328 aa31.48■■■□□ 2.63
VRK2-202ENST00000412104 MARF1Q9Y4F3 1742 aaKnown RBP31.48■■■□□ 2.63
VRK2-202ENST00000412104 MVPQ14764 893 aaKnown RBP31.48■■■□□ 2.63
VRK2-202ENST00000412104 FTSJ3Q8IY81 847 aaKnown RBP31.48■■■□□ 2.63
VRK2-202ENST00000412104 GNAI1P63096 354 aa31.47■■■□□ 2.63
VRK2-202ENST00000412104 SBNO1A3KN83 1393 aa31.46■■■□□ 2.63
VRK2-202ENST00000412104 TRIM27P14373 513 aa31.46■■■□□ 2.63
VRK2-202ENST00000412104 FLT4P35916 1363 aa31.46■■■□□ 2.63
VRK2-202ENST00000412104 ZNF853P0CG23 659 aa31.45■■■□□ 2.63
VRK2-202ENST00000412104 ANP32AP39687 249 aaKnown RBP31.45■■■□□ 2.63
VRK2-202ENST00000412104 ALDH1L2Q3SY69 923 aa31.45■■■□□ 2.62
VRK2-202ENST00000412104 KIF16BQ96L93 1317 aa31.44■■■□□ 2.62
VRK2-202ENST00000412104 NPHP4O75161 1426 aaPredicted RBP31.44■■■□□ 2.62
VRK2-202ENST00000412104 ATF7IPQ6VMQ6 1270 aa31.43■■■□□ 2.62
VRK2-202ENST00000412104 ANP32EQ9BTT0 268 aa31.43■■■□□ 2.62
VRK2-202ENST00000412104 ZNF428Q96B54 188 aa31.43■■■□□ 2.62
VRK2-202ENST00000412104 NOB1Q9ULX3 412 aaKnown RBP31.43■■■□□ 2.62
VRK2-202ENST00000412104 MBIPQ9NS73 344 aa31.42■■■□□ 2.62
VRK2-202ENST00000412104 ARHGEF10O15013 1369 aa31.42■■■□□ 2.62
VRK2-202ENST00000412104 FAM83GA6ND36 823 aa31.41■■■□□ 2.62
VRK2-202ENST00000412104 ADGRL3Q9HAR2 1447 aa31.41■■■□□ 2.62
VRK2-202ENST00000412104 PCDHB15Q9Y5E8 787 aa31.41■■■□□ 2.62
VRK2-202ENST00000412104 NLRP6P59044 892 aa31.4■■■□□ 2.62
VRK2-202ENST00000412104 CFAP44Q96MT7 982 aa31.4■■■□□ 2.62
VRK2-202ENST00000412104 RGS3P49796 1198 aa31.39■■■□□ 2.62
VRK2-202ENST00000412104 RBM33Q96EV2 1170 aaKnown RBP31.38■■■□□ 2.61
VRK2-202ENST00000412104 IPO8O15397 1037 aaKnown RBP31.37■■■□□ 2.61
VRK2-202ENST00000412104 VAMP4O75379 141 aa31.37■■■□□ 2.61
VRK2-202ENST00000412104 DCTN1Q14203 1278 aa31.37■■■□□ 2.61
VRK2-202ENST00000412104 PHF8Q9UPP1 1060 aa31.37■■■□□ 2.61
VRK2-202ENST00000412104 AMPHP49418 695 aa31.36■■■□□ 2.61
VRK2-202ENST00000412104 BRPF1P55201 1214 aaPredicted RBP31.36■■■□□ 2.61
VRK2-202ENST00000412104 TSPYL6Q8N831 410 aa31.36■■■□□ 2.61
VRK2-202ENST00000412104 DNAJC5Q9H3Z4 198 aa31.35■■■□□ 2.61
VRK2-202ENST00000412104 NUTM2GQ5VZR2 741 aa31.34■■■□□ 2.61
VRK2-202ENST00000412104 ITPRIPQ8IWB1 547 aa31.34■■■□□ 2.61
VRK2-202ENST00000412104 ABTB2Q8N961 1025 aa31.34■■■□□ 2.61
VRK2-202ENST00000412104 DDX19BQ9UMR2 479 aa31.34■■■□□ 2.61
VRK2-202ENST00000412104 NWD1Q149M9 1564 aa31.33■■■□□ 2.61
VRK2-202ENST00000412104 KDRP35968 1356 aa31.33■■■□□ 2.61
VRK2-202ENST00000412104 KIF24Q5T7B8 1368 aa31.33■■■□□ 2.61
VRK2-202ENST00000412104 IPO9Q96P70 1041 aaKnown RBP31.33■■■□□ 2.61
VRK2-202ENST00000412104 PAK3O75914 559 aaPredicted RBP31.32■■■□□ 2.6
VRK2-202ENST00000412104 ERICH6Q7L0X2 663 aa31.32■■■□□ 2.6
VRK2-202ENST00000412104 FAM161AQ3B820 660 aa31.31■■■□□ 2.6
VRK2-202ENST00000412104 NPM2Q86SE8 214 aaKnown RBP31.31■■■□□ 2.6
VRK2-202ENST00000412104 TMEM57Q8N5G2 664 aa31.31■■■□□ 2.6
VRK2-202ENST00000412104 IGSF1Q8N6C5 1336 aa31.31■■■□□ 2.6
VRK2-202ENST00000412104 RWDD1Q9H446 243 aaPredicted RBP31.3■■■□□ 2.6
VRK2-202ENST00000412104 TWISTNBQ3B726 338 aaPredicted RBP31.3■■■□□ 2.6
VRK2-202ENST00000412104 MRPL50Q8N5N7 158 aaKnown RBP31.3■■■□□ 2.6
VRK2-202ENST00000412104 C8orf34Q49A92 452 aa31.29■■■□□ 2.6
VRK2-202ENST00000412104 ELL2O00472 640 aaPredicted RBP31.28■■■□□ 2.6
VRK2-202ENST00000412104 C8orf58Q8NAV2 365 aa31.28■■■□□ 2.6
VRK2-202ENST00000412104 EYA1Q99502 592 aa31.28■■■□□ 2.6
VRK2-202ENST00000412104 HOXC9P31274 260 aa31.27■■■□□ 2.6
VRK2-202ENST00000412104 NOP58Q9Y2X3 529 aaKnown RBP31.27■■■□□ 2.6
VRK2-202ENST00000412104 MCM10Q7L590 875 aa31.26■■■□□ 2.6
VRK2-202ENST00000412104 LTN1O94822 1766 aa31.26■■■□□ 2.59
VRK2-202ENST00000412104 VIRMAQ69YN4 1812 aaKnown RBP31.25■■■□□ 2.59
VRK2-202ENST00000412104 C14orf37Q86TY3 774 aa31.25■■■□□ 2.59
VRK2-202ENST00000412104 ESCO1Q5FWF5 840 aa31.24■■■□□ 2.59
VRK2-202ENST00000412104 ARHGAP45Q92619 1136 aa31.24■■■□□ 2.59
VRK2-202ENST00000412104 MTHFSDQ2M296 383 aaKnown RBP31.22■■■□□ 2.59
VRK2-202ENST00000412104 RTL1A6NKG5 1358 aa31.22■■■□□ 2.59
VRK2-202ENST00000412104 CHL1O00533 1208 aa31.22■■■□□ 2.59
VRK2-202ENST00000412104 ZBTB40Q9NUA8 1239 aa31.22■■■□□ 2.59
VRK2-202ENST00000412104 CRB1P82279 1406 aa31.21■■■□□ 2.59
VRK2-202ENST00000412104 NFAT5O94916 1531 aa31.21■■■□□ 2.59
VRK2-202ENST00000412104 PDZRN3Q9UPQ7 1066 aa31.2■■■□□ 2.58
VRK2-202ENST00000412104 FOXO3O43524 673 aa31.19■■■□□ 2.58
VRK2-202ENST00000412104 PSME1Q06323 249 aa31.19■■■□□ 2.58
VRK2-202ENST00000412104 HDAC1Q13547 482 aaPredicted RBP31.19■■■□□ 2.58
VRK2-202ENST00000412104 GAS2L2Q8NHY3 880 aa31.17■■■□□ 2.58
VRK2-202ENST00000412104 KIAA0232Q92628 1395 aa31.16■■■□□ 2.58
VRK2-202ENST00000412104 ABCC4O15439 1325 aa31.15■■■□□ 2.58
VRK2-202ENST00000412104 ZBTB47Q9UFB7 747 aaPredicted RBP31.15■■■□□ 2.58
VRK2-202ENST00000412104 RTF1Q92541 710 aaKnown RBP31.14■■■□□ 2.58
VRK2-202ENST00000412104 LRRC37A3O60309 1634 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms