RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 MAP3K19Q56UN5 1328 aa21.11■□□□□ 0.97
TRAPPC12-203ENST00000411973 FBLN1P23142 703 aa21.11■□□□□ 0.97
TRAPPC12-203ENST00000411973 RBM6P78332 1123 aaKnown RBP21.11■□□□□ 0.97
TRAPPC12-203ENST00000411973 COL5A2P05997 1499 aaPredicted RBP21.11■□□□□ 0.97
TRAPPC12-203ENST00000411973 MAP2P11137 1827 aaKnown RBP21.11■□□□□ 0.97
TRAPPC12-203ENST00000411973 RXRBP28702 533 aa21.1■□□□□ 0.97
TRAPPC12-203ENST00000411973 GJD4Q96KN9 370 aaPredicted RBP21.1■□□□□ 0.97
TRAPPC12-203ENST00000411973 KIF24Q5T7B8 1368 aa21.1■□□□□ 0.97
TRAPPC12-203ENST00000411973 IP6K1Q92551 441 aa21.09■□□□□ 0.97
TRAPPC12-203ENST00000411973 RTL1A6NKG5 1358 aa21.09■□□□□ 0.97
TRAPPC12-203ENST00000411973 BLMP54132 1417 aaPredicted RBP21.08■□□□□ 0.97
TRAPPC12-203ENST00000411973 EVA1CP58658 441 aa21.08■□□□□ 0.97
TRAPPC12-203ENST00000411973 RRS1Q15050 365 aaKnown RBP21.08■□□□□ 0.97
TRAPPC12-203ENST00000411973 MORC1Q86VD1 984 aa21.08■□□□□ 0.97
TRAPPC12-203ENST00000411973 GLI3P10071 1580 aa21.07■□□□□ 0.96
TRAPPC12-203ENST00000411973 ZNF316A6NFI3 1004 aaPredicted RBP21.07■□□□□ 0.96
TRAPPC12-203ENST00000411973 STRN4Q9NRL3 753 aa21.07■□□□□ 0.96
TRAPPC12-203ENST00000411973 CDK12Q9NYV4 1490 aaPredicted RBP21.07■□□□□ 0.96
TRAPPC12-203ENST00000411973 SPATA31A5Q5VU36 1347 aa21.06■□□□□ 0.96
TRAPPC12-203ENST00000411973 SPATA31A7Q8IWB4 1347 aa21.06■□□□□ 0.96
TRAPPC12-203ENST00000411973 HOXC9P31274 260 aa21.06■□□□□ 0.96
TRAPPC12-203ENST00000411973 PEAK1Q9H792 1746 aa21.05■□□□□ 0.96
TRAPPC12-203ENST00000411973 AMPHP49418 695 aa21.05■□□□□ 0.96
TRAPPC12-203ENST00000411973 LARP1Q6PKG0 1096 aaKnown RBP21.05■□□□□ 0.96
TRAPPC12-203ENST00000411973 WDR17Q8IZU2 1322 aa21.04■□□□□ 0.96
TRAPPC12-203ENST00000411973 DDX10Q13206 875 aaKnown RBP21.04■□□□□ 0.96
TRAPPC12-203ENST00000411973 CC2D1BQ5T0F9 858 aaKnown RBP21.04■□□□□ 0.96
TRAPPC12-203ENST00000411973 POLKQ9UBT6 870 aa21.04■□□□□ 0.96
TRAPPC12-203ENST00000411973 CCDC9Q9Y3X0 531 aaKnown RBP21.04■□□□□ 0.96
TRAPPC12-203ENST00000411973 FLT4P35916 1363 aa21.04■□□□□ 0.96
TRAPPC12-203ENST00000411973 CRB1P82279 1406 aa21.04■□□□□ 0.96
TRAPPC12-203ENST00000411973 ERBB3P21860 1342 aa21.04■□□□□ 0.96
TRAPPC12-203ENST00000411973 SPATA31A1Q5TZJ5 1347 aa21.04■□□□□ 0.96
TRAPPC12-203ENST00000411973 TNNT2P45379 298 aaPredicted RBP21.03■□□□□ 0.96
TRAPPC12-203ENST00000411973 EMILIN1Q9Y6C2 1016 aa21.03■□□□□ 0.96
TRAPPC12-203ENST00000411973 ONECUT3O60422 494 aaPredicted RBP21.02■□□□□ 0.96
TRAPPC12-203ENST00000411973 ILDR2Q71H61 639 aa21.02■□□□□ 0.96
TRAPPC12-203ENST00000411973 INSRP06213 1382 aa21.01■□□□□ 0.95
TRAPPC12-203ENST00000411973 ANKRD24Q8TF21 1146 aa21.01■□□□□ 0.95
TRAPPC12-203ENST00000411973 SMG6Q86US8 1419 aaKnown RBP21.01■□□□□ 0.95
TRAPPC12-203ENST00000411973 FAM208AQ9UK61 1670 aaKnown RBP21■□□□□ 0.95
TRAPPC12-203ENST00000411973 CSB-PGBD3P0DP91 1061 aa20.99■□□□□ 0.95
TRAPPC12-203ENST00000411973 HSP90AB2PQ58FF8 381 aa20.99■□□□□ 0.95
TRAPPC12-203ENST00000411973 TOM1L2Q6ZVM7 507 aa20.99■□□□□ 0.95
TRAPPC12-203ENST00000411973 THRAP3Q9Y2W1 955 aaKnown RBP20.99■□□□□ 0.95
TRAPPC12-203ENST00000411973 RGS12O14924 1447 aa20.98■□□□□ 0.95
TRAPPC12-203ENST00000411973 BARGINQ6ZT62 677 aa20.98■□□□□ 0.95
TRAPPC12-203ENST00000411973 TCP11L2Q8N4U5 519 aa20.98■□□□□ 0.95
TRAPPC12-203ENST00000411973 CARD10Q9BWT7 1032 aa20.98■□□□□ 0.95
TRAPPC12-203ENST00000411973 PPM1GO15355 546 aaPredicted RBP20.97■□□□□ 0.95
TRAPPC12-203ENST00000411973 FAM98CQ17RN3 349 aaKnown RBP20.96■□□□□ 0.95
TRAPPC12-203ENST00000411973 USP35Q9P2H5 1018 aa20.96■□□□□ 0.95
TRAPPC12-203ENST00000411973 THSD7AQ9UPZ6 1657 aa20.96■□□□□ 0.95
TRAPPC12-203ENST00000411973 LTV1Q96GA3 475 aaPredicted RBP20.94■□□□□ 0.94
TRAPPC12-203ENST00000411973 NLRP2Q9NX02 1062 aa20.94■□□□□ 0.94
TRAPPC12-203ENST00000411973 RGPD2P0DJD1 1756 aa20.93■□□□□ 0.94
TRAPPC12-203ENST00000411973 WNK3Q9BYP7 1800 aa20.93■□□□□ 0.94
TRAPPC12-203ENST00000411973 CNGB1Q14028 1251 aaPredicted RBP20.93■□□□□ 0.94
TRAPPC12-203ENST00000411973 SEPT12Q8IYM1 358 aa20.93■□□□□ 0.94
TRAPPC12-203ENST00000411973 PARD3Q8TEW0 1356 aa20.92■□□□□ 0.94
TRAPPC12-203ENST00000411973 BRWD3Q6RI45 1802 aa20.92■□□□□ 0.94
TRAPPC12-203ENST00000411973 MTHFSP49914 203 aa20.91■□□□□ 0.94
TRAPPC12-203ENST00000411973 CDCA7Q9BWT1 371 aaPredicted RBP20.91■□□□□ 0.94
TRAPPC12-203ENST00000411973 PARP4Q9UKK3 1724 aaKnown RBP20.9■□□□□ 0.94
TRAPPC12-203ENST00000411973 DISP2A7MBM2 1401 aa20.9■□□□□ 0.94
TRAPPC12-203ENST00000411973 NBPF6Q5VWK0 638 aa20.9■□□□□ 0.94
TRAPPC12-203ENST00000411973 NBPF4Q96M43 638 aa20.9■□□□□ 0.94
TRAPPC12-203ENST00000411973 PPP2R1AP30153 589 aa20.88■□□□□ 0.93
TRAPPC12-203ENST00000411973 EIF4A2Q14240 407 aaKnown RBP20.88■□□□□ 0.93
TRAPPC12-203ENST00000411973 RALBP1Q15311 655 aa20.87■□□□□ 0.93
TRAPPC12-203ENST00000411973 NCAPD2Q15021 1401 aa20.87■□□□□ 0.93
TRAPPC12-203ENST00000411973 A0A0G2JS52 829 aa20.86■□□□□ 0.93
TRAPPC12-203ENST00000411973 MYT1Q01538 1121 aa20.86■□□□□ 0.93
TRAPPC12-203ENST00000411973 IL2RBP14784 551 aa20.85■□□□□ 0.93
TRAPPC12-203ENST00000411973 LRRC37A3O60309 1634 aa20.85■□□□□ 0.93
TRAPPC12-203ENST00000411973 KRT27Q7Z3Y8 459 aa20.84■□□□□ 0.93
TRAPPC12-203ENST00000411973 EYA1Q99502 592 aa20.84■□□□□ 0.93
TRAPPC12-203ENST00000411973 COL3A1P02461 1466 aaPredicted RBP20.83■□□□□ 0.93
TRAPPC12-203ENST00000411973 IL13P35225 146 aa20.83■□□□□ 0.93
TRAPPC12-203ENST00000411973 RGPD1P0DJD0 1748 aa20.83■□□□□ 0.92
TRAPPC12-203ENST00000411973 IGSF1Q8N6C5 1336 aa20.82■□□□□ 0.92
TRAPPC12-203ENST00000411973 USHBP1Q8N6Y0 703 aa20.82■□□□□ 0.92
TRAPPC12-203ENST00000411973 DDB1Q16531 1140 aa20.81■□□□□ 0.92
TRAPPC12-203ENST00000411973 PRKRIP1Q9H875 184 aaPredicted RBP20.81■□□□□ 0.92
TRAPPC12-203ENST00000411973 DIAPH1O60610 1272 aaKnown RBP20.8■□□□□ 0.92
TRAPPC12-203ENST00000411973 PDE3BQ13370 1112 aa20.8■□□□□ 0.92
TRAPPC12-203ENST00000411973 EP400Q96L91 3159 aa20.8■□□□□ 0.92
TRAPPC12-203ENST00000411973 TNS2Q63HR2 1409 aa20.79■□□□□ 0.92
TRAPPC12-203ENST00000411973 MEGF6O75095 1541 aa20.79■□□□□ 0.92
TRAPPC12-203ENST00000411973 EXOC5O00471 708 aa20.79■□□□□ 0.92
TRAPPC12-203ENST00000411973 CFAP53Q96M91 514 aa20.79■□□□□ 0.92
TRAPPC12-203ENST00000411973 RAPGEF4Q8WZA2 1011 aa20.78■□□□□ 0.92
TRAPPC12-203ENST00000411973 OVOS2A0A0G2JMS6 1433 aa20.78■□□□□ 0.92
TRAPPC12-203ENST00000411973 KDRP35968 1356 aa20.77■□□□□ 0.92
TRAPPC12-203ENST00000411973 MYBBP1AQ9BQG0 1328 aaKnown RBP20.77■□□□□ 0.91
TRAPPC12-203ENST00000411973 PLEKHG2Q9H7P9 1386 aa20.76■□□□□ 0.91
TRAPPC12-203ENST00000411973 TATP17735 454 aaPredicted RBP20.76■□□□□ 0.91
TRAPPC12-203ENST00000411973 SOCS7O14512 581 aa20.75■□□□□ 0.91
TRAPPC12-203ENST00000411973 PKD1L3Q7Z443 1732 aa20.74■□□□□ 0.91
TRAPPC12-203ENST00000411973 MARCH10Q8NA82 808 aaPredicted RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms