RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 SURF6O75683 361 aaKnown RBP6.08□□□□□ -1.44
SCN3A-203ENST00000409101 SRCIN1Q9C0H9 1055 aa6.08□□□□□ -1.44
SCN3A-203ENST00000409101 NOP58Q9Y2X3 529 aaKnown RBP6.08□□□□□ -1.44
SCN3A-203ENST00000409101 ZNF622Q969S3 477 aaKnown RBP eCLIP6.08□□□□□ -1.44
SCN3A-203ENST00000409101 NACAP1Q9BZK3 213 aa6.08□□□□□ -1.44
SCN3A-203ENST00000409101 EIF4G3O43432 1585 aaKnown RBP6.08□□□□□ -1.44
SCN3A-203ENST00000409101 NCOA1Q15788 1441 aa6.07□□□□□ -1.44
SCN3A-203ENST00000409101 ADAMTS12P58397 1594 aa6.07□□□□□ -1.44
SCN3A-203ENST00000409101 GNAI2P04899 355 aa6.07□□□□□ -1.44
SCN3A-203ENST00000409101 CCT4P50991 539 aaKnown RBP6.07□□□□□ -1.44
SCN3A-203ENST00000409101 CRBNQ96SW2 442 aa6.07□□□□□ -1.44
SCN3A-203ENST00000409101 TEX13AQ9BXU3 409 aaPredicted RBP6.07□□□□□ -1.44
SCN3A-203ENST00000409101 RRP1P56182 461 aaKnown RBP6.07□□□□□ -1.44
SCN3A-203ENST00000409101 NME9Q86XW9 330 aa6.07□□□□□ -1.44
SCN3A-203ENST00000409101 RAI14Q9P0K7 980 aa6.07□□□□□ -1.44
SCN3A-203ENST00000409101 HIP1O00291 1037 aa6.07□□□□□ -1.44
SCN3A-203ENST00000409101 CHRNA2Q15822 529 aa6.07□□□□□ -1.44
SCN3A-203ENST00000409101 ATP6V1DQ9Y5K8 247 aa6.07□□□□□ -1.44
SCN3A-203ENST00000409101 FOXD4L5Q5VV16 416 aaPredicted RBP6.07□□□□□ -1.44
SCN3A-203ENST00000409101 ANKRD24Q8TF21 1146 aa6.07□□□□□ -1.44
SCN3A-203ENST00000409101 FOXD4L4Q8WXT5 416 aaPredicted RBP6.07□□□□□ -1.44
SCN3A-203ENST00000409101 ZNF428Q96B54 188 aa6.07□□□□□ -1.44
SCN3A-203ENST00000409101 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.07□□□□□ -1.44
SCN3A-203ENST00000409101 MPHOSPH10O00566 681 aaKnown RBP6.06□□□□□ -1.44
SCN3A-203ENST00000409101 RRP12Q5JTH9 1297 aaKnown RBP6.06□□□□□ -1.44
SCN3A-203ENST00000409101 BRD4O60885 1362 aaPredicted RBP6.06□□□□□ -1.44
SCN3A-203ENST00000409101 INTS3Q68E01 1043 aaKnown RBP6.06□□□□□ -1.44
SCN3A-203ENST00000409101 SIL1Q9H173 461 aa6.06□□□□□ -1.44
SCN3A-203ENST00000409101 ADAMTS8Q9UP79 889 aa6.06□□□□□ -1.44
SCN3A-203ENST00000409101 ABCC2Q92887 1545 aa6.06□□□□□ -1.44
SCN3A-203ENST00000409101 FCHSD2O94868 740 aa6.06□□□□□ -1.44
SCN3A-203ENST00000409101 EXOSC9Q06265 439 aaKnown RBP6.06□□□□□ -1.44
SCN3A-203ENST00000409101 CAVIN4Q5BKX8 364 aa6.06□□□□□ -1.44
SCN3A-203ENST00000409101 IFNL2Q8IZJ0 200 aa6.06□□□□□ -1.44
SCN3A-203ENST00000409101 C19orf44Q9H6X5 657 aa6.06□□□□□ -1.44
SCN3A-203ENST00000409101 ATP10BO94823 1461 aa6.06□□□□□ -1.44
SCN3A-203ENST00000409101 ADGRF5Q8IZF2 1346 aa6.06□□□□□ -1.44
SCN3A-203ENST00000409101 HOOK1Q9UJC3 728 aaKnown RBP6.06□□□□□ -1.44
SCN3A-203ENST00000409101 DDB1Q16531 1140 aa6.06□□□□□ -1.44
SCN3A-203ENST00000409101 TSR1Q2NL82 804 aaKnown RBP6.06□□□□□ -1.44
SCN3A-203ENST00000409101 ACSBG1Q96GR2 724 aa6.06□□□□□ -1.44
SCN3A-203ENST00000409101 DUOX2Q9NRD8 1548 aa6.06□□□□□ -1.44
SCN3A-203ENST00000409101 SMARCC1Q92922 1105 aaPredicted RBP6.05□□□□□ -1.44
SCN3A-203ENST00000409101 ABCC10Q5T3U5 1492 aa6.05□□□□□ -1.44
SCN3A-203ENST00000409101 ZMYM3Q14202 1370 aa6.05□□□□□ -1.44
SCN3A-203ENST00000409101 PSMA5P28066 241 aa6.05□□□□□ -1.44
SCN3A-203ENST00000409101 FMNL2Q96PY5 1086 aa6.05□□□□□ -1.44
SCN3A-203ENST00000409101 ZBED9Q6R2W3 1325 aa6.05□□□□□ -1.44
SCN3A-203ENST00000409101 TRMT112Q9UI30 125 aaKnown RBP6.05□□□□□ -1.44
SCN3A-203ENST00000409101 FAM161AQ3B820 660 aa6.05□□□□□ -1.44
SCN3A-203ENST00000409101 PCMTD1Q96MG8 357 aaPredicted RBP6.05□□□□□ -1.44
SCN3A-203ENST00000409101 STK32BQ9NY57 414 aa6.05□□□□□ -1.44
SCN3A-203ENST00000409101 CLEC11AQ9Y240 323 aa6.05□□□□□ -1.44
SCN3A-203ENST00000409101 ACEP12821 1306 aa6.05□□□□□ -1.44
SCN3A-203ENST00000409101 NAIPQ13075 1403 aa6.05□□□□□ -1.44
SCN3A-203ENST00000409101 CCDC85AQ96PX6 553 aaPredicted RBP6.05□□□□□ -1.44
SCN3A-203ENST00000409101 SLKQ9H2G2 1235 aaPredicted RBP6.05□□□□□ -1.44
SCN3A-203ENST00000409101 TPM3P06753 285 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 NFE2L2Q16236 605 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 CEP126Q9P2H0 1117 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 LRP2BPQ9P2M1 347 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 ATP6V1AP38606 617 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 FOSBP53539 338 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 AAMPQ13685 434 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 CRACR2BQ8N4Y2 399 aaPredicted RBP6.04□□□□□ -1.44
SCN3A-203ENST00000409101 ZCRB1Q8TBF4 217 aaKnown RBP6.04□□□□□ -1.44
SCN3A-203ENST00000409101 C14orf93Q9H972 538 aaKnown RBP6.04□□□□□ -1.44
SCN3A-203ENST00000409101 PARP3Q9Y6F1 533 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 THOC2Q8NI27 1593 aaKnown RBP6.04□□□□□ -1.44
SCN3A-203ENST00000409101 METTL24Q5JXM2 366 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 SLF2Q8IX21 1173 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 SPINK5Q9NQ38 1064 aaPredicted RBP6.04□□□□□ -1.44
SCN3A-203ENST00000409101 TTC21BQ7Z4L5 1316 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 ATP10AO60312 1499 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 KIAA0556O60303 1618 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 TAF7Q15545 349 aaPredicted RBP6.04□□□□□ -1.44
SCN3A-203ENST00000409101 DDX46Q7L014 1031 aaKnown RBP6.04□□□□□ -1.44
SCN3A-203ENST00000409101 PPP1R42Q7Z4L9 355 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 STK11IPQ8N1F8 1099 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 MYD88Q99836 296 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 TFCP2L1Q9NZI6 479 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 SYCP2Q9BX26 1530 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 KDM4AO75164 1064 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 TPM1P09493 284 aa6.04□□□□□ -1.44
SCN3A-203ENST00000409101 NOB1Q9ULX3 412 aaKnown RBP6.04□□□□□ -1.44
SCN3A-203ENST00000409101 FKBP4Q02790 459 aaKnown RBP eCLIP6.03□□□□□ -1.44
SCN3A-203ENST00000409101 ANKRD20A12PQ8NF67 263 aa6.03□□□□□ -1.44
SCN3A-203ENST00000409101 ITSN2Q9NZM3 1697 aa6.03□□□□□ -1.44
SCN3A-203ENST00000409101 C6orf229H3BNL8 230 aa6.03□□□□□ -1.44
SCN3A-203ENST00000409101 IFIT1P09914 478 aaKnown RBP6.03□□□□□ -1.44
SCN3A-203ENST00000409101 LARP1Q6PKG0 1096 aaKnown RBP6.03□□□□□ -1.44
SCN3A-203ENST00000409101 TTC21AQ8NDW8 1320 aa6.03□□□□□ -1.44
SCN3A-203ENST00000409101 AKAP2Q9Y2D5 859 aa6.03□□□□□ -1.44
SCN3A-203ENST00000409101 TSR2Q969E8 191 aaKnown RBP6.03□□□□□ -1.44
SCN3A-203ENST00000409101 CDK5RAP3Q96JB5 506 aa6.03□□□□□ -1.44
SCN3A-203ENST00000409101 MYO1BO43795 1136 aa6.03□□□□□ -1.44
SCN3A-203ENST00000409101 MSNP26038 577 aaKnown RBP6.03□□□□□ -1.44
SCN3A-203ENST00000409101 EXOC6Q8TAG9 804 aa6.03□□□□□ -1.44
SCN3A-203ENST00000409101 USP5P45974 858 aa6.03□□□□□ -1.44
SCN3A-203ENST00000409101 SOGA3Q5TF21 947 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms