RNA–Protein interactions for RNA: ENST00000408742.1

MIR548N-201, Transcript of microRNA 548n, humanhuman

BASIC

Gene MIR548N, Length 75 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548N-201ENST00000408742 ZNF467Q7Z7K2 595 aaPredicted RBP0.28□□□□□ -2.36
MIR548N-201ENST00000408742 EFCAB3Q8N7B9 438 aa0.28□□□□□ -2.36
MIR548N-201ENST00000408742 ZDHHC16Q969W1 377 aa0.28□□□□□ -2.36
MIR548N-201ENST00000408742 MS4A4AQ96JQ5 239 aa0.28□□□□□ -2.36
MIR548N-201ENST00000408742 SLC38A3Q99624 504 aa0.28□□□□□ -2.36
MIR548N-201ENST00000408742 LRRC4BQ9NT99 713 aa0.28□□□□□ -2.36
MIR548N-201ENST00000408742 FCF1Q9Y324 198 aaKnown RBP0.28□□□□□ -2.36
MIR548N-201ENST00000408742 PCDHB3Q9Y5E6 796 aa0.28□□□□□ -2.36
MIR548N-201ENST00000408742 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP0.28□□□□□ -2.36
MIR548N-201ENST00000408742 PITPNM2Q9BZ72 1349 aa0.28□□□□□ -2.36
MIR548N-201ENST00000408742 GPR25O00155 361 aa0.27□□□□□ -2.37
MIR548N-201ENST00000408742 IL12RB1P42701 662 aa0.27□□□□□ -2.37
MIR548N-201ENST00000408742 RAP1GAPP47736 663 aa0.27□□□□□ -2.37
MIR548N-201ENST00000408742 INHBCP55103 352 aa0.27□□□□□ -2.37
MIR548N-201ENST00000408742 MSL1Q68DK7 614 aa0.27□□□□□ -2.37
MIR548N-201ENST00000408742 ZFPM1Q8IX07 1006 aa0.27□□□□□ -2.37
MIR548N-201ENST00000408742 GPR98Q8WXG9 6306 aa0.27□□□□□ -2.37
MIR548N-201ENST00000408742 SLC35F4A4IF30 521 aa0.26□□□□□ -2.37
MIR548N-201ENST00000408742 FIGNL2A6NMB9 653 aa0.26□□□□□ -2.37
MIR548N-201ENST00000408742 ERVV-2B6SEH9 535 aa0.26□□□□□ -2.37
MIR548N-201ENST00000408742 SMAPO00193 183 aa0.26□□□□□ -2.37
MIR548N-201ENST00000408742 WNT11O96014 354 aa0.26□□□□□ -2.37
MIR548N-201ENST00000408742 SPATA31C1P0DKV0 1188 aa0.26□□□□□ -2.37
MIR548N-201ENST00000408742 JUNBP17275 347 aaPredicted RBP0.26□□□□□ -2.37
MIR548N-201ENST00000408742 OSBPP22059 807 aa0.26□□□□□ -2.37
MIR548N-201ENST00000408742 NBPF20Q3BBV1 942 aa0.26□□□□□ -2.37
MIR548N-201ENST00000408742 BSPRYQ5W0U4 402 aa0.26□□□□□ -2.37
MIR548N-201ENST00000408742 NBPF10Q6P3W6 841 aaKnown RBP0.26□□□□□ -2.37
MIR548N-201ENST00000408742 GRASPQ7Z6J2 395 aaPredicted RBP0.26□□□□□ -2.37
MIR548N-201ENST00000408742 TRIM41Q8WV44 630 aa0.26□□□□□ -2.37
MIR548N-201ENST00000408742 WASF2Q9Y6W5 498 aa0.26□□□□□ -2.37
MIR548N-201ENST00000408742 SOS2Q07890 1332 aaPredicted RBP0.26□□□□□ -2.37
MIR548N-201ENST00000408742 FCGBPQ9Y6R7 5405 aaPredicted RBP0.26□□□□□ -2.37
MIR548N-201ENST00000408742 TRIM6-TRIM34B2RNG4 842 aa0.25□□□□□ -2.37
MIR548N-201ENST00000408742 PIK3R2O00459 728 aa0.25□□□□□ -2.37
MIR548N-201ENST00000408742 ZBTB24O43167 697 aaPredicted RBP0.25□□□□□ -2.37
MIR548N-201ENST00000408742 TBC1D12O60347 775 aa0.25□□□□□ -2.37
MIR548N-201ENST00000408742 ONECUT3O60422 494 aaPredicted RBP0.25□□□□□ -2.37
MIR548N-201ENST00000408742 APBA3O96018 575 aa0.25□□□□□ -2.37
MIR548N-201ENST00000408742 TGFB1P01137 390 aa0.25□□□□□ -2.37
MIR548N-201ENST00000408742 BMP2P12643 396 aa0.25□□□□□ -2.37
MIR548N-201ENST00000408742 TNFRSF1AP19438 455 aa0.25□□□□□ -2.37
MIR548N-201ENST00000408742 SPINK2P20155 84 aa0.25□□□□□ -2.37
MIR548N-201ENST00000408742 GRNP28799 593 aaKnown RBP0.25□□□□□ -2.37
MIR548N-201ENST00000408742 ZNF800Q2TB10 664 aaPredicted RBP eCLIP0.25□□□□□ -2.37
MIR548N-201ENST00000408742 CBLL1Q75N03 491 aa0.25□□□□□ -2.37
MIR548N-201ENST00000408742 MPNDQ8N594 471 aa0.25□□□□□ -2.37
MIR548N-201ENST00000408742 EDARADDQ8WWZ3 215 aa0.25□□□□□ -2.37
MIR548N-201ENST00000408742 REPIN1Q9BWE0 567 aaKnown RBP0.25□□□□□ -2.37
MIR548N-201ENST00000408742 OXCT2Q9BYC2 517 aaPredicted RBP0.25□□□□□ -2.37
MIR548N-201ENST00000408742 MYRFQ9Y2G1 1151 aa0.25□□□□□ -2.37
MIR548N-201ENST00000408742 CARMIL2Q6F5E8 1435 aa0.24□□□□□ -2.37
MIR548N-201ENST00000408742 NRG1Q02297 640 aaPredicted RBP0.24□□□□□ -2.37
MIR548N-201ENST00000408742 MESP2Q0VG99 397 aa0.24□□□□□ -2.37
MIR548N-201ENST00000408742 NFIXQ14938 502 aa0.24□□□□□ -2.37
MIR548N-201ENST00000408742 LCE1AQ5T7P2 110 aa0.24□□□□□ -2.37
MIR548N-201ENST00000408742 RC3H1Q5TC82 1133 aaKnown RBP0.24□□□□□ -2.37
MIR548N-201ENST00000408742 AMIGO3Q86WK7 504 aa0.24□□□□□ -2.37
MIR548N-201ENST00000408742 MIER1Q8N108 512 aa0.24□□□□□ -2.37
MIR548N-201ENST00000408742 TRIM11Q96F44 468 aa0.24□□□□□ -2.37
MIR548N-201ENST00000408742 PLVAPQ9BX97 442 aa0.24□□□□□ -2.37
MIR548N-201ENST00000408742 CUEDC1Q9NWM3 386 aaPredicted RBP0.24□□□□□ -2.37
MIR548N-201ENST00000408742 C11orf21Q9P2W6 132 aa0.24□□□□□ -2.37
MIR548N-201ENST00000408742 CNTNAP4Q9C0A0 1308 aa0.23□□□□□ -2.37
MIR548N-201ENST00000408742 FAM229AH3BQW9 127 aa0.23□□□□□ -2.37
MIR548N-201ENST00000408742 PAPLNO95428 1278 aa0.23□□□□□ -2.37
MIR548N-201ENST00000408742 CELA3BP08861 270 aa0.23□□□□□ -2.37
MIR548N-201ENST00000408742 TIMP2P16035 220 aa0.23□□□□□ -2.37
MIR548N-201ENST00000408742 DGKGP49619 791 aa0.23□□□□□ -2.37
MIR548N-201ENST00000408742 TRIM32Q13049 653 aa0.23□□□□□ -2.37
MIR548N-201ENST00000408742 PDAP1Q13442 181 aaKnown RBP0.23□□□□□ -2.37
MIR548N-201ENST00000408742 ANKLE2Q86XL3 938 aa0.23□□□□□ -2.37
MIR548N-201ENST00000408742 SCUBE3Q8IX30 993 aa0.23□□□□□ -2.37
MIR548N-201ENST00000408742 GPR20Q99678 358 aa0.23□□□□□ -2.37
MIR548N-201ENST00000408742 PARD6AQ9NPB6 346 aa0.23□□□□□ -2.37
MIR548N-201ENST00000408742 WDR4P57081 412 aaKnown RBP0.22□□□□□ -2.37
MIR548N-201ENST00000408742 SKOR1P84550 965 aa0.22□□□□□ -2.37
MIR548N-201ENST00000408742 COL19A1Q14993 1142 aa0.22□□□□□ -2.37
MIR548N-201ENST00000408742 GRIK4Q16099 956 aa0.22□□□□□ -2.37
MIR548N-201ENST00000408742 KRTAP27-1Q3LI81 207 aa0.22□□□□□ -2.37
MIR548N-201ENST00000408742 SCUBE1Q8IWY4 988 aa0.22□□□□□ -2.37
MIR548N-201ENST00000408742 SPATA3Q8NHX4 192 aa0.22□□□□□ -2.37
MIR548N-201ENST00000408742 TMC2Q8TDI7 906 aa0.22□□□□□ -2.37
MIR548N-201ENST00000408742 WASF1Q92558 559 aa0.22□□□□□ -2.37
MIR548N-201ENST00000408742 JPH4Q96JJ6 628 aa0.22□□□□□ -2.37
MIR548N-201ENST00000408742 MDN1Q9NU22 5596 aa0.22□□□□□ -2.37
MIR548N-201ENST00000408742 SYNE2Q8WXH0 6885 aaKnown RBP0.21□□□□□ -2.38
MIR548N-201ENST00000408742 KMT2DO14686 5537 aa0.21□□□□□ -2.38
MIR548N-201ENST00000408742 MATN3O15232 486 aa0.21□□□□□ -2.38
MIR548N-201ENST00000408742 SIAH2O43255 324 aa0.21□□□□□ -2.38
MIR548N-201ENST00000408742 CFHP08603 1231 aa0.21□□□□□ -2.38
MIR548N-201ENST00000408742 FSTP19883 344 aa0.21□□□□□ -2.38
MIR548N-201ENST00000408742 DTX1Q86Y01 620 aa0.21□□□□□ -2.38
MIR548N-201ENST00000408742 CXorf38Q8TB03 319 aa0.21□□□□□ -2.38
MIR548N-201ENST00000408742 BTBD6Q96KE9 485 aa0.21□□□□□ -2.38
MIR548N-201ENST00000408742 FAM84AQ96KN4 292 aa0.21□□□□□ -2.38
MIR548N-201ENST00000408742 KRTAP1-5Q9BYS1 174 aa0.21□□□□□ -2.38
MIR548N-201ENST00000408742 ZCCHC4Q9H5U6 513 aa0.21□□□□□ -2.38
MIR548N-201ENST00000408742 C3orf80F5H4A9 247 aa0.2□□□□□ -2.38
MIR548N-201ENST00000408742 MX2P20592 715 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms