RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 ALS2Q96Q42 1657 aa11.49□□□□□ -0.57
GPC3-203ENST00000406757 PSDA5PKW4 1024 aaPredicted RBP11.48□□□□□ -0.57
GPC3-203ENST00000406757 BAG6P46379 1132 aa11.48□□□□□ -0.57
GPC3-203ENST00000406757 CARD14Q9BXL6 1004 aa11.48□□□□□ -0.57
GPC3-203ENST00000406757 ATP7BP35670 1465 aa11.48□□□□□ -0.57
GPC3-203ENST00000406757 COL14A1Q05707 1796 aaKnown RBP11.48□□□□□ -0.57
GPC3-203ENST00000406757 MYOM1P52179 1685 aa11.47□□□□□ -0.57
GPC3-203ENST00000406757 ACEP12821 1306 aa11.46□□□□□ -0.57
GPC3-203ENST00000406757 SPATA31A5Q5VU36 1347 aa11.46□□□□□ -0.57
GPC3-203ENST00000406757 SPATA31A7Q8IWB4 1347 aa11.46□□□□□ -0.57
GPC3-203ENST00000406757 EN1Q05925 392 aaPredicted RBP11.46□□□□□ -0.57
GPC3-203ENST00000406757 SPDYE1Q8NFV5 336 aaPredicted RBP11.46□□□□□ -0.57
GPC3-203ENST00000406757 PRDM11Q9NQV5 511 aa11.46□□□□□ -0.57
GPC3-203ENST00000406757 PLEKHG3A1L390 1219 aa11.45□□□□□ -0.58
GPC3-203ENST00000406757 CHRNA2Q15822 529 aa11.45□□□□□ -0.58
GPC3-203ENST00000406757 HDGFL2Q7Z4V5 671 aaPredicted RBP11.45□□□□□ -0.58
GPC3-203ENST00000406757 CRYBG1Q9Y4K1 1723 aa11.45□□□□□ -0.58
GPC3-203ENST00000406757 CD163L1Q9NR16 1453 aa11.44□□□□□ -0.58
GPC3-203ENST00000406757 A0A1W2PP64 1363 aa11.44□□□□□ -0.58
GPC3-203ENST00000406757 KIAA0232Q92628 1395 aa11.44□□□□□ -0.58
GPC3-203ENST00000406757 PER1O15534 1290 aaPredicted RBP11.44□□□□□ -0.58
GPC3-203ENST00000406757 CC2D1BQ5T0F9 858 aaKnown RBP11.44□□□□□ -0.58
GPC3-203ENST00000406757 NUTM2GQ5VZR2 741 aa11.44□□□□□ -0.58
GPC3-203ENST00000406757 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.44□□□□□ -0.585e-7■■□□□ 14.2
GPC3-203ENST00000406757 STRN4Q9NRL3 753 aa11.44□□□□□ -0.58
GPC3-203ENST00000406757 TERF2IPQ9NYB0 399 aa11.44□□□□□ -0.58
GPC3-203ENST00000406757 SSUH2Q9Y2M2 353 aa11.44□□□□□ -0.58
GPC3-203ENST00000406757 PRKAR2AP13861 404 aaKnown RBP11.43□□□□□ -0.58
GPC3-203ENST00000406757 ZC3H6P61129 1189 aaKnown RBP11.43□□□□□ -0.58
GPC3-203ENST00000406757 NSD3Q9BZ95 1437 aa11.43□□□□□ -0.58
GPC3-203ENST00000406757 THSD7AQ9UPZ6 1657 aa11.43□□□□□ -0.58
GPC3-203ENST00000406757 LRP5O75197 1615 aa11.42□□□□□ -0.58
GPC3-203ENST00000406757 KTN1Q86UP2 1357 aaKnown RBP11.42□□□□□ -0.58
GPC3-203ENST00000406757 ANKRD36BQ8N2N9 1353 aa11.42□□□□□ -0.58
GPC3-203ENST00000406757 SPATA31A1Q5TZJ5 1347 aa11.42□□□□□ -0.58
GPC3-203ENST00000406757 USP35Q9P2H5 1018 aa11.42□□□□□ -0.58
GPC3-203ENST00000406757 CLEC11AQ9Y240 323 aa11.42□□□□□ -0.58
GPC3-203ENST00000406757 KNSTRNQ9Y448 316 aa11.42□□□□□ -0.58
GPC3-203ENST00000406757 TOPAZ1Q8N9V7 1692 aa11.42□□□□□ -0.58
GPC3-203ENST00000406757 RGPD1P0DJD0 1748 aa11.41□□□□□ -0.58
GPC3-203ENST00000406757 ITSN1Q15811 1721 aa11.41□□□□□ -0.58
GPC3-203ENST00000406757 R3HDM1Q15032 1099 aaKnown RBP11.41□□□□□ -0.58
GPC3-203ENST00000406757 EZH2Q15910 746 aaKnown RBP11.41□□□□□ -0.58
GPC3-203ENST00000406757 ZNF692Q9BU19 519 aaPredicted RBP11.41□□□□□ -0.58
GPC3-203ENST00000406757 PHRF1Q9P1Y6 1649 aaKnown RBP11.41□□□□□ -0.58
GPC3-203ENST00000406757 NINLQ9Y2I6 1382 aa11.41□□□□□ -0.58
GPC3-203ENST00000406757 TRIM37O94972 964 aa11.4□□□□□ -0.58
GPC3-203ENST00000406757 NME9Q86XW9 330 aa11.4□□□□□ -0.58
GPC3-203ENST00000406757 MIER1Q8N108 512 aa11.4□□□□□ -0.58
GPC3-203ENST00000406757 GGNBP2Q9H3C7 697 aa11.4□□□□□ -0.58
GPC3-203ENST00000406757 CPSF1Q10570 1443 aaKnown RBP11.4□□□□□ -0.58
GPC3-203ENST00000406757 POLR3AO14802 1390 aaPredicted RBP11.4□□□□□ -0.59
GPC3-203ENST00000406757 DISP2A7MBM2 1401 aa11.39□□□□□ -0.59
GPC3-203ENST00000406757 EVA1CP58658 441 aa11.39□□□□□ -0.59
GPC3-203ENST00000406757 AMER1Q5JTC6 1135 aaPredicted RBP11.39□□□□□ -0.59
GPC3-203ENST00000406757 ABTB2Q8N961 1025 aa11.39□□□□□ -0.59
GPC3-203ENST00000406757 TNS1Q9HBL0 1735 aaKnown RBP11.39□□□□□ -0.59
GPC3-203ENST00000406757 TTC21BQ7Z4L5 1316 aa11.38□□□□□ -0.59
GPC3-203ENST00000406757 TNNT2P45379 298 aaPredicted RBP11.38□□□□□ -0.59
GPC3-203ENST00000406757 LARP1Q6PKG0 1096 aaKnown RBP11.38□□□□□ -0.59
GPC3-203ENST00000406757 FAM196AQ6ZSG2 479 aa11.38□□□□□ -0.59
GPC3-203ENST00000406757 AKAP12Q02952 1782 aa11.38□□□□□ -0.59
GPC3-203ENST00000406757 NRKQ7Z2Y5 1582 aa11.37□□□□□ -0.59
GPC3-203ENST00000406757 USP6P35125 1406 aa11.37□□□□□ -0.59
GPC3-203ENST00000406757 SSH2Q76I76 1423 aa11.37□□□□□ -0.59
GPC3-203ENST00000406757 FYB1O15117 783 aa11.37□□□□□ -0.59
GPC3-203ENST00000406757 ANP32CO43423 234 aa11.37□□□□□ -0.59
GPC3-203ENST00000406757 APBA3O96018 575 aa11.37□□□□□ -0.59
GPC3-203ENST00000406757 CAMKK2Q96RR4 588 aa11.37□□□□□ -0.59
GPC3-203ENST00000406757 CAMTA1Q9Y6Y1 1673 aa11.36□□□□□ -0.59
GPC3-203ENST00000406757 FBLN1P23142 703 aa11.36□□□□□ -0.59
GPC3-203ENST00000406757 PDE3BQ13370 1112 aa11.36□□□□□ -0.59
GPC3-203ENST00000406757 BARGINQ6ZT62 677 aa11.36□□□□□ -0.59
GPC3-203ENST00000406757 CGNL1Q0VF96 1302 aa11.35□□□□□ -0.59
GPC3-203ENST00000406757 EDC4Q6P2E9 1401 aaKnown RBP11.35□□□□□ -0.59
GPC3-203ENST00000406757 MON2Q7Z3U7 1717 aa11.35□□□□□ -0.59
GPC3-203ENST00000406757 C19orf67A6NJJ6 358 aa11.35□□□□□ -0.59
GPC3-203ENST00000406757 SOX12O15370 315 aa11.35□□□□□ -0.59
GPC3-203ENST00000406757 MORC1Q86VD1 984 aa11.35□□□□□ -0.59
GPC3-203ENST00000406757 TCP11L2Q8N4U5 519 aa11.35□□□□□ -0.59
GPC3-203ENST00000406757 USP19O94966 1318 aa11.35□□□□□ -0.59
GPC3-203ENST00000406757 CPDO75976 1380 aa11.34□□□□□ -0.59
GPC3-203ENST00000406757 ZBTB7CA1YPR0 619 aa11.34□□□□□ -0.59
GPC3-203ENST00000406757 GCP02774 474 aa11.34□□□□□ -0.59
GPC3-203ENST00000406757 NLRP13Q86W25 1043 aa11.34□□□□□ -0.59
GPC3-203ENST00000406757 PRKRIP1Q9H875 184 aaPredicted RBP11.34□□□□□ -0.59
GPC3-203ENST00000406757 LMO7Q8WWI1 1683 aa11.33□□□□□ -0.6
GPC3-203ENST00000406757 NLRP6P59044 892 aa11.33□□□□□ -0.6
GPC3-203ENST00000406757 PARD3Q8TEW0 1356 aa11.32□□□□□ -0.6
GPC3-203ENST00000406757 CCDC184Q52MB2 194 aa11.32□□□□□ -0.6
GPC3-203ENST00000406757 COG3Q96JB2 828 aa11.32□□□□□ -0.6
GPC3-203ENST00000406757 TTC21AQ8NDW8 1320 aa11.32□□□□□ -0.6
GPC3-203ENST00000406757 COL5A2P05997 1499 aaPredicted RBP11.32□□□□□ -0.6
GPC3-203ENST00000406757 THRAP3Q9Y2W1 955 aaKnown RBP11.31□□□□□ -0.6
GPC3-203ENST00000406757 KIF20BQ96Q89 1820 aa11.3□□□□□ -0.6
GPC3-203ENST00000406757 PPP2R1AP30153 589 aa11.3□□□□□ -0.6
GPC3-203ENST00000406757 RALBP1Q15311 655 aa11.3□□□□□ -0.6
GPC3-203ENST00000406757 RREB1Q92766 1687 aa11.3□□□□□ -0.6
GPC3-203ENST00000406757 NUP188Q5SRE5 1749 aa11.29□□□□□ -0.6
GPC3-203ENST00000406757 CRB1P82279 1406 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms