RNA–Protein interactions for RNA: ENST00000405375.5

CDKN1A-203, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-203ENST00000405375 CALD1Q05682 793 aaKnown RBP20.69■□□□□ 0.9
CDKN1A-203ENST00000405375 HDAC1Q13547 482 aaPredicted RBP20.69■□□□□ 0.9
CDKN1A-203ENST00000405375 RTL5Q5HYW3 569 aaPredicted RBP20.69■□□□□ 0.9
CDKN1A-203ENST00000405375 ITPRIPQ8IWB1 547 aa20.69■□□□□ 0.9
CDKN1A-203ENST00000405375 DEKP35659 375 aaKnown RBP20.69■□□□□ 0.9
CDKN1A-203ENST00000405375 TMEM57Q8N5G2 664 aa20.69■□□□□ 0.9
CDKN1A-203ENST00000405375 ZNF853P0CG23 659 aa20.68■□□□□ 0.9
CDKN1A-203ENST00000405375 THUMPD2Q9BTF0 503 aaKnown RBP20.68■□□□□ 0.9
CDKN1A-203ENST00000405375 SEC24BO95487 1268 aa20.67■□□□□ 0.9
CDKN1A-203ENST00000405375 IFT57Q9NWB7 429 aa20.67■□□□□ 0.9
CDKN1A-203ENST00000405375 PTPRUQ92729 1446 aa20.67■□□□□ 0.9
CDKN1A-203ENST00000405375 PLEKHG3A1L390 1219 aa20.67■□□□□ 0.9
CDKN1A-203ENST00000405375 SLC4A3P48751 1232 aa20.67■□□□□ 0.9
CDKN1A-203ENST00000405375 ZBTB40Q9NUA8 1239 aa20.67■□□□□ 0.9
CDKN1A-203ENST00000405375 TTC21BQ7Z4L5 1316 aa20.67■□□□□ 0.9
CDKN1A-203ENST00000405375 DLG5Q8TDM6 1919 aa20.66■□□□□ 0.9
CDKN1A-203ENST00000405375 OVOS2A0A0J9YW53 1432 aa20.66■□□□□ 0.9
CDKN1A-203ENST00000405375 OVOS2Q6IE36 1432 aa20.66■□□□□ 0.9
CDKN1A-203ENST00000405375 GNAI1P63096 354 aa20.66■□□□□ 0.9
CDKN1A-203ENST00000405375 USP35Q9P2H5 1018 aa20.66■□□□□ 0.9
CDKN1A-203ENST00000405375 ACEP12821 1306 aa20.65■□□□□ 0.9
CDKN1A-203ENST00000405375 VAMP4O75379 141 aa20.65■□□□□ 0.9
CDKN1A-203ENST00000405375 SLIT1O75093 1534 aa20.65■□□□□ 0.9
CDKN1A-203ENST00000405375 ARHGAP23Q9P227 1491 aa20.65■□□□□ 0.9
CDKN1A-203ENST00000405375 PLPPR3Q6T4P5 718 aa20.65■□□□□ 0.9
CDKN1A-203ENST00000405375 USP6P35125 1406 aa20.64■□□□□ 0.89
CDKN1A-203ENST00000405375 LMOD3Q0VAK6 560 aa20.64■□□□□ 0.89
CDKN1A-203ENST00000405375 MBIPQ9NS73 344 aa20.64■□□□□ 0.89
CDKN1A-203ENST00000405375 SMC5Q8IY18 1101 aa20.62■□□□□ 0.89
CDKN1A-203ENST00000405375 TSPYL6Q8N831 410 aa20.62■□□□□ 0.89
CDKN1A-203ENST00000405375 SLC26A8Q96RN1 970 aa20.62■□□□□ 0.89
CDKN1A-203ENST00000405375 DAXXQ9UER7 740 aaPredicted RBP20.62■□□□□ 0.89
CDKN1A-203ENST00000405375 NALCNQ8IZF0 1738 aa20.62■□□□□ 0.89
CDKN1A-203ENST00000405375 CFAP44Q96MT7 982 aa20.62■□□□□ 0.89
CDKN1A-203ENST00000405375 SSH2Q76I76 1423 aa20.61■□□□□ 0.89
CDKN1A-203ENST00000405375 MRPL50Q8N5N7 158 aaKnown RBP20.61■□□□□ 0.89
CDKN1A-203ENST00000405375 ARHGAP45Q92619 1136 aa20.61■□□□□ 0.89
CDKN1A-203ENST00000405375 EID1Q9Y6B2 187 aa20.61■□□□□ 0.89
CDKN1A-203ENST00000405375 PIK3R4Q99570 1358 aa20.61■□□□□ 0.89
CDKN1A-203ENST00000405375 PTCH1Q13635 1447 aa20.61■□□□□ 0.89
CDKN1A-203ENST00000405375 EIF4A2Q14240 407 aaKnown RBP20.6■□□□□ 0.89
CDKN1A-203ENST00000405375 USP31Q70CQ4 1352 aa20.6■□□□□ 0.89
CDKN1A-203ENST00000405375 NUTM2FA1L443 756 aa20.59■□□□□ 0.89
CDKN1A-203ENST00000405375 TBX22Q9Y458 520 aa20.59■□□□□ 0.89
CDKN1A-203ENST00000405375 PEAK1Q9H792 1746 aa20.58■□□□□ 0.88
CDKN1A-203ENST00000405375 AMOTL2Q9Y2J4 779 aa20.58■□□□□ 0.88
CDKN1A-203ENST00000405375 FAM83GA6ND36 823 aa20.57■□□□□ 0.88
CDKN1A-203ENST00000405375 AEBP1Q8IUX7 1158 aa20.57■□□□□ 0.88
CDKN1A-203ENST00000405375 RGPD1P0DJD0 1748 aa20.56■□□□□ 0.88
CDKN1A-203ENST00000405375 TWISTNBQ3B726 338 aaPredicted RBP20.56■□□□□ 0.88
CDKN1A-203ENST00000405375 SULT6B1Q6IMI4 303 aa20.56■□□□□ 0.88
CDKN1A-203ENST00000405375 C8orf58Q8NAV2 365 aa20.56■□□□□ 0.88
CDKN1A-203ENST00000405375 ZBTB7BO15156 539 aaPredicted RBP20.55■□□□□ 0.88
CDKN1A-203ENST00000405375 TBC1D32Q96NH3 1257 aa20.55■□□□□ 0.88
CDKN1A-203ENST00000405375 DNAJC5Q9H3Z4 198 aa20.55■□□□□ 0.88
CDKN1A-203ENST00000405375 ABCC4O15439 1325 aa20.55■□□□□ 0.88
CDKN1A-203ENST00000405375 ELL2O00472 640 aaPredicted RBP20.55■□□□□ 0.88
CDKN1A-203ENST00000405375 DCTN1Q14203 1278 aa20.55■□□□□ 0.88
CDKN1A-203ENST00000405375 FER1L4A9Z1Z3 1794 aa20.54■□□□□ 0.88
CDKN1A-203ENST00000405375 DIP2AQ14689 1571 aa20.54■□□□□ 0.88
CDKN1A-203ENST00000405375 HSP90AB2PQ58FF8 381 aa20.53■□□□□ 0.88
CDKN1A-203ENST00000405375 TTC21AQ8NDW8 1320 aa20.53■□□□□ 0.88
CDKN1A-203ENST00000405375 NUCB1Q02818 461 aa20.52■□□□□ 0.88
CDKN1A-203ENST00000405375 NFKBIBQ15653 356 aa20.52■□□□□ 0.88
CDKN1A-203ENST00000405375 UPF2Q9HAU5 1272 aaKnown RBP20.52■□□□□ 0.88
CDKN1A-203ENST00000405375 CHMP4BQ9H444 224 aaKnown RBP20.52■□□□□ 0.88
CDKN1A-203ENST00000405375 THEMISQ8N1K5 641 aaPredicted RBP20.51■□□□□ 0.87
CDKN1A-203ENST00000405375 XRN1Q8IZH2 1706 aaKnown RBP20.5■□□□□ 0.87
CDKN1A-203ENST00000405375 MAP3K19Q56UN5 1328 aa20.49■□□□□ 0.87
CDKN1A-203ENST00000405375 RGPD8O14715 1765 aaPredicted RBP20.49■□□□□ 0.87
CDKN1A-203ENST00000405375 CHL1O00533 1208 aa20.48■□□□□ 0.87
CDKN1A-203ENST00000405375 BECN1Q14457 450 aa20.48■□□□□ 0.87
CDKN1A-203ENST00000405375 ARHGEF10O15013 1369 aa20.48■□□□□ 0.87
CDKN1A-203ENST00000405375 API5Q9BZZ5 524 aaKnown RBP20.47■□□□□ 0.87
CDKN1A-203ENST00000405375 RIMS1Q86UR5 1692 aaKnown RBP20.47■□□□□ 0.87
CDKN1A-203ENST00000405375 FMN2Q9NZ56 1722 aa20.47■□□□□ 0.87
CDKN1A-203ENST00000405375 CHD1LQ86WJ1 897 aa20.47■□□□□ 0.87
CDKN1A-203ENST00000405375 SBNO1A3KN83 1393 aa20.46■□□□□ 0.87
CDKN1A-203ENST00000405375 FLT4P35916 1363 aa20.46■□□□□ 0.87
CDKN1A-203ENST00000405375 KIAA0232Q92628 1395 aa20.45■□□□□ 0.86
CDKN1A-203ENST00000405375 PIK3C2AO00443 1686 aa20.45■□□□□ 0.86
CDKN1A-203ENST00000405375 MCM10Q7L590 875 aa20.45■□□□□ 0.86
CDKN1A-203ENST00000405375 NGDNQ8NEJ9 315 aaKnown RBP20.45■□□□□ 0.86
CDKN1A-203ENST00000405375 GCC1Q96CN9 775 aa20.45■□□□□ 0.86
CDKN1A-203ENST00000405375 LNPKQ9C0E8 428 aa20.45■□□□□ 0.86
CDKN1A-203ENST00000405375 KIF24Q5T7B8 1368 aa20.45■□□□□ 0.86
CDKN1A-203ENST00000405375 SOX12O15370 315 aa20.44■□□□□ 0.86
CDKN1A-203ENST00000405375 SIRT2Q8IXJ6 389 aa20.44■□□□□ 0.86
CDKN1A-203ENST00000405375 C1orf115Q9H7X2 142 aa20.44■□□□□ 0.86
CDKN1A-203ENST00000405375 KDRP35968 1356 aa20.44■□□□□ 0.86
CDKN1A-203ENST00000405375 ANKARQ7Z5J8 1434 aa20.44■□□□□ 0.86
CDKN1A-203ENST00000405375 CRB1P82279 1406 aa20.44■□□□□ 0.86
CDKN1A-203ENST00000405375 BCL11AQ9H165 835 aa20.43■□□□□ 0.86
CDKN1A-203ENST00000405375 HAP1P54257 671 aaPredicted RBP20.43■□□□□ 0.86
CDKN1A-203ENST00000405375 KRT24Q2M2I5 525 aa20.43■□□□□ 0.86
CDKN1A-203ENST00000405375 RGS12O14924 1447 aa20.42■□□□□ 0.86
CDKN1A-203ENST00000405375 KCNA6P17658 529 aa20.41■□□□□ 0.86
CDKN1A-203ENST00000405375 INTS3Q68E01 1043 aaKnown RBP20.41■□□□□ 0.86
CDKN1A-203ENST00000405375 TBC1D2Q9BYX2 928 aa20.41■□□□□ 0.86
CDKN1A-203ENST00000405375 C22orf23Q9BZE7 217 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms