RNA–Protein interactions for RNA: ENST00000404933.6

SMS-202, Transcript of spermine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMS, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-202ENST00000404933 RGPD1P0DJD0 1748 aa15.31■□□□□ 0.04
SMS-202ENST00000404933 FLT4P35916 1363 aa15.31■□□□□ 0.04
SMS-202ENST00000404933 MAP3K19Q56UN5 1328 aa15.31■□□□□ 0.04
SMS-202ENST00000404933 CALD1Q05682 793 aaKnown RBP15.31■□□□□ 0.04
SMS-202ENST00000404933 PHACTR3Q96KR7 559 aa15.31■□□□□ 0.04
SMS-202ENST00000404933 KIF24Q5T7B8 1368 aa15.3■□□□□ 0.04
SMS-202ENST00000404933 SOX12O15370 315 aa15.3■□□□□ 0.04
SMS-202ENST00000404933 PAK3O75914 559 aaPredicted RBP15.3■□□□□ 0.04
SMS-202ENST00000404933 RARSP54136 660 aaKnown RBP15.3■□□□□ 0.04
SMS-202ENST00000404933 ESCO1Q5FWF5 840 aa15.3■□□□□ 0.04
SMS-202ENST00000404933 ABTB2Q8N961 1025 aa15.3■□□□□ 0.04
SMS-202ENST00000404933 DLG5Q8TDM6 1919 aa15.3■□□□□ 0.04
SMS-202ENST00000404933 LMOD3Q0VAK6 560 aa15.29■□□□□ 0.04
SMS-202ENST00000404933 HSP90AB2PQ58FF8 381 aa15.29■□□□□ 0.04
SMS-202ENST00000404933 PDE3AQ14432 1141 aa15.29■□□□□ 0.04
SMS-202ENST00000404933 AMPHP49418 695 aa15.28■□□□□ 0.04
SMS-202ENST00000404933 PSME1Q06323 249 aa15.28■□□□□ 0.04
SMS-202ENST00000404933 TSR2Q969E8 191 aaKnown RBP15.28■□□□□ 0.04
SMS-202ENST00000404933 ARHGEF10O15013 1369 aa15.28■□□□□ 0.04
SMS-202ENST00000404933 CANXP27824 592 aaKnown RBP15.27■□□□□ 0.04
SMS-202ENST00000404933 SULT6B1Q6IMI4 303 aa15.27■□□□□ 0.04
SMS-202ENST00000404933 C19orf44Q9H6X5 657 aa15.27■□□□□ 0.03
SMS-202ENST00000404933 KIF1AQ12756 1690 aa15.26■□□□□ 0.03
SMS-202ENST00000404933 EXOSC9Q06265 439 aaKnown RBP15.26■□□□□ 0.03
SMS-202ENST00000404933 NCOA3Q9Y6Q9 1424 aa15.25■□□□□ 0.03
SMS-202ENST00000404933 NUTM2GQ5VZR2 741 aa15.25■□□□□ 0.03
SMS-202ENST00000404933 AEBP1Q8IUX7 1158 aa15.24■□□□□ 0.03
SMS-202ENST00000404933 STRCP1A6NGW2 1772 aa15.24■□□□□ 0.03
SMS-202ENST00000404933 GNAI1P63096 354 aa15.24■□□□□ 0.03
SMS-202ENST00000404933 RTL1A6NKG5 1358 aa15.24■□□□□ 0.03
SMS-202ENST00000404933 LTN1O94822 1766 aa15.24■□□□□ 0.03
SMS-202ENST00000404933 C1orf167Q5SNV9 1468 aa15.23■□□□□ 0.03
SMS-202ENST00000404933 FRAT1Q92837 279 aaPredicted RBP15.23■□□□□ 0.03
SMS-202ENST00000404933 ORAI2Q96SN7 254 aa15.23■□□□□ 0.03
SMS-202ENST00000404933 IFT57Q9NWB7 429 aa15.23■□□□□ 0.03
SMS-202ENST00000404933 DCCP43146 1447 aa15.23■□□□□ 0.03
SMS-202ENST00000404933 HOXC9P31274 260 aa15.22■□□□□ 0.03
SMS-202ENST00000404933 IGSF1Q8N6C5 1336 aa15.22■□□□□ 0.03
SMS-202ENST00000404933 KDRP35968 1356 aa15.22■□□□□ 0.03
SMS-202ENST00000404933 HSPA2P54652 639 aa15.22■□□□□ 0.03
SMS-202ENST00000404933 KCNH5Q8NCM2 988 aa15.22■□□□□ 0.03
SMS-202ENST00000404933 TMEM94Q12767 1356 aa15.21■□□□□ 0.03
SMS-202ENST00000404933 NFAT5O94916 1531 aa15.21■□□□□ 0.03
SMS-202ENST00000404933 FOXO3O43524 673 aa15.21■□□□□ 0.03
SMS-202ENST00000404933 ATF3P18847 181 aa15.21■□□□□ 0.03
SMS-202ENST00000404933 ZNF428Q96B54 188 aa15.21■□□□□ 0.03
SMS-202ENST00000404933 LAS1LQ9Y4W2 734 aaKnown RBP15.21■□□□□ 0.03
SMS-202ENST00000404933 KDM4FA0A1W2PPD8 638 aa15.2■□□□□ 0.02
SMS-202ENST00000404933 ZNF853P0CG23 659 aa15.2■□□□□ 0.02
SMS-202ENST00000404933 MS4A1P11836 297 aa15.2■□□□□ 0.02
SMS-202ENST00000404933 AAMPQ13685 434 aa15.2■□□□□ 0.02
SMS-202ENST00000404933 THUMPD2Q9BTF0 503 aaKnown RBP15.2■□□□□ 0.02
SMS-202ENST00000404933 BCL2L13Q9BXK5 485 aa15.2■□□□□ 0.02
SMS-202ENST00000404933 TRPM3Q9HCF6 1732 aaPredicted RBP15.2■□□□□ 0.02
SMS-202ENST00000404933 CFAP44Q96MT7 982 aa15.2■□□□□ 0.02
SMS-202ENST00000404933 EYA1Q99502 592 aa15.2■□□□□ 0.02
SMS-202ENST00000404933 SMC4Q9NTJ3 1288 aa15.2■□□□□ 0.02
SMS-202ENST00000404933 PHRF1Q9P1Y6 1649 aaKnown RBP15.19■□□□□ 0.02
SMS-202ENST00000404933 ALDH1L2Q3SY69 923 aa15.19■□□□□ 0.02
SMS-202ENST00000404933 ZKSCAN2Q63HK3 967 aa15.19■□□□□ 0.02
SMS-202ENST00000404933 PANK1Q8TE04 598 aa15.19■□□□□ 0.02
SMS-202ENST00000404933 LMTK3Q96Q04 1460 aa15.19■□□□□ 0.02
SMS-202ENST00000404933 CENPQQ7L2Z9 268 aaPredicted RBP15.18■□□□□ 0.02
SMS-202ENST00000404933 MST1RQ04912 1400 aa15.18■□□□□ 0.02
SMS-202ENST00000404933 STRCQ7RTU9 1775 aa15.18■□□□□ 0.02
SMS-202ENST00000404933 SLIT3O75094 1523 aa15.17■□□□□ 0.02
SMS-202ENST00000404933 KRT28Q7Z3Y7 464 aa15.17■□□□□ 0.02
SMS-202ENST00000404933 SSH1Q8WYL5 1049 aa15.17■□□□□ 0.02
SMS-202ENST00000404933 IP6K1Q92551 441 aa15.17■□□□□ 0.02
SMS-202ENST00000404933 COG6Q9Y2V7 657 aa15.17■□□□□ 0.02
SMS-202ENST00000404933 KDM2BQ8NHM5 1336 aa15.17■□□□□ 0.02
SMS-202ENST00000404933 FAM83GA6ND36 823 aa15.17■□□□□ 0.02
SMS-202ENST00000404933 CADPS2Q86UW7 1296 aa15.17■□□□□ 0.02
SMS-202ENST00000404933 MBIPQ9NS73 344 aa15.17■□□□□ 0.02
SMS-202ENST00000404933 GAS2L2Q8NHY3 880 aa15.16■□□□□ 0.02
SMS-202ENST00000404933 KIF16BQ96L93 1317 aa15.16■□□□□ 0.02
SMS-202ENST00000404933 XPCQ01831 940 aaPredicted RBP15.15■□□□□ 0.02
SMS-202ENST00000404933 TCERG1O14776 1098 aaKnown RBP15.15■□□□□ 0.02
SMS-202ENST00000404933 IPO8O15397 1037 aaKnown RBP15.15■□□□□ 0.02
SMS-202ENST00000404933 DCTN1Q14203 1278 aa15.15■□□□□ 0.02
SMS-202ENST00000404933 FTSJ3Q8IY81 847 aaKnown RBP15.15■□□□□ 0.02
SMS-202ENST00000404933 DZIP1LQ8IYY4 767 aaKnown RBP15.15■□□□□ 0.02
SMS-202ENST00000404933 CLUAP1Q96AJ1 413 aa15.15■□□□□ 0.02
SMS-202ENST00000404933 MSH6P52701 1360 aa15.15■□□□□ 0.02
SMS-202ENST00000404933 ALS2Q96Q42 1657 aa15.14■□□□□ 0.01
SMS-202ENST00000404933 USP19O94966 1318 aa15.14■□□□□ 0.01
SMS-202ENST00000404933 GCP02774 474 aa15.14■□□□□ 0.01
SMS-202ENST00000404933 RLBP1P12271 317 aa15.14■□□□□ 0.01
SMS-202ENST00000404933 BRPF1P55201 1214 aaPredicted RBP15.14■□□□□ 0.01
SMS-202ENST00000404933 MTHFSDQ2M296 383 aaKnown RBP15.14■□□□□ 0.01
SMS-202ENST00000404933 NOP58Q9Y2X3 529 aaKnown RBP15.14■□□□□ 0.01
SMS-202ENST00000404933 XIRP1Q702N8 1843 aaKnown RBP15.14■□□□□ 0.01
SMS-202ENST00000404933 VAMP4O75379 141 aa15.13■□□□□ 0.01
SMS-202ENST00000404933 LMOD2Q6P5Q4 547 aa15.13■□□□□ 0.01
SMS-202ENST00000404933 ATF7IPQ6VMQ6 1270 aa15.13■□□□□ 0.01
SMS-202ENST00000404933 RTF1Q92541 710 aaKnown RBP15.13■□□□□ 0.01
SMS-202ENST00000404933 LTV1Q96GA3 475 aaPredicted RBP15.13■□□□□ 0.01
SMS-202ENST00000404933 HTATSF1O43719 755 aaKnown RBP15.13■□□□□ 0.01
SMS-202ENST00000404933 MVPQ14764 893 aaKnown RBP15.13■□□□□ 0.01
SMS-202ENST00000404933 MCM10Q7L590 875 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms