RNA–Protein interactions for RNA: ENST00000403750.5

PPARGC1B-204, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PPARGC1B, Length 3,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-204ENST00000403750 NECTIN2Q92692 538 aa14.44□□□□□ -0.1
PPARGC1B-204ENST00000403750 TRIM44Q96DX7 344 aaPredicted RBP14.44□□□□□ -0.1
PPARGC1B-204ENST00000403750 NOL8Q76FK4 1167 aaKnown RBP14.43□□□□□ -0.1
PPARGC1B-204ENST00000403750 COG3Q96JB2 828 aa14.43□□□□□ -0.1
PPARGC1B-204ENST00000403750 GBP4Q96PP9 640 aa14.43□□□□□ -0.1
PPARGC1B-204ENST00000403750 ZNF692Q9BU19 519 aaPredicted RBP14.43□□□□□ -0.1
PPARGC1B-204ENST00000403750 RBM25P49756 843 aaKnown RBP14.43□□□□□ -0.1
PPARGC1B-204ENST00000403750 SULT6B1Q6IMI4 303 aa14.43□□□□□ -0.1
PPARGC1B-204ENST00000403750 KIF2CQ99661 725 aa14.43□□□□□ -0.1
PPARGC1B-204ENST00000403750 GCC1Q96CN9 775 aa14.42□□□□□ -0.1
PPARGC1B-204ENST00000403750 CHAMP1Q96JM3 812 aa14.42□□□□□ -0.1
PPARGC1B-204ENST00000403750 TSHZ3Q63HK5 1081 aa14.42□□□□□ -0.1
PPARGC1B-204ENST00000403750 PUS7Q96PZ0 661 aaKnown RBP14.42□□□□□ -0.1
PPARGC1B-204ENST00000403750 ARHGEF28Q8N1W1 1705 aaKnown RBP14.42□□□□□ -0.1
PPARGC1B-204ENST00000403750 SIGLEC1Q9BZZ2 1709 aa14.42□□□□□ -0.1
PPARGC1B-204ENST00000403750 ZC3H13Q5T200 1668 aaKnown RBP14.42□□□□□ -0.1
PPARGC1B-204ENST00000403750 LMTK2Q8IWU2 1503 aa14.42□□□□□ -0.1
PPARGC1B-204ENST00000403750 K7ELQ4 463 aaPredicted RBP14.41□□□□□ -0.1
PPARGC1B-204ENST00000403750 MRE11P49959 708 aa14.41□□□□□ -0.1
PPARGC1B-204ENST00000403750 NEXMIFQ5QGS0 1516 aa14.41□□□□□ -0.1
PPARGC1B-204ENST00000403750 FSD2A1L4K1 749 aa14.41□□□□□ -0.1
PPARGC1B-204ENST00000403750 PLEKHG5O94827 1062 aa14.41□□□□□ -0.1
PPARGC1B-204ENST00000403750 GSPT1P15170 499 aaKnown RBP14.41□□□□□ -0.1
PPARGC1B-204ENST00000403750 DDX49Q9Y6V7 483 aaKnown RBP14.41□□□□□ -0.1
PPARGC1B-204ENST00000403750 FOXD4L6Q3SYB3 417 aaPredicted RBP14.41□□□□□ -0.1
PPARGC1B-204ENST00000403750 MCTP1Q6DN14 999 aa14.41□□□□□ -0.1
PPARGC1B-204ENST00000403750 FOXD4L3Q6VB84 417 aaPredicted RBP14.41□□□□□ -0.1
PPARGC1B-204ENST00000403750 CD163L1Q9NR16 1453 aa14.4□□□□□ -0.1
PPARGC1B-204ENST00000403750 CDC45O75419 566 aa14.4□□□□□ -0.1
PPARGC1B-204ENST00000403750 IL13P35225 146 aa14.4□□□□□ -0.1
PPARGC1B-204ENST00000403750 PKP1Q13835 747 aa14.39□□□□□ -0.11
PPARGC1B-204ENST00000403750 COL3A1P02461 1466 aaPredicted RBP14.39□□□□□ -0.11
PPARGC1B-204ENST00000403750 LRRC7Q96NW7 1537 aa14.39□□□□□ -0.11
PPARGC1B-204ENST00000403750 NEURL4Q96JN8 1562 aa14.39□□□□□ -0.11
PPARGC1B-204ENST00000403750 CALD1Q05682 793 aaKnown RBP14.39□□□□□ -0.11
PPARGC1B-204ENST00000403750 IFT57Q9NWB7 429 aa14.39□□□□□ -0.11
PPARGC1B-204ENST00000403750 MLH3Q9UHC1 1453 aa14.39□□□□□ -0.11
PPARGC1B-204ENST00000403750 ADGRB2O60241 1585 aa14.39□□□□□ -0.11
PPARGC1B-204ENST00000403750 F6X3S4 739 aa14.39□□□□□ -0.11
PPARGC1B-204ENST00000403750 NUDT16Q96DE0 195 aaKnown RBP14.39□□□□□ -0.11
PPARGC1B-204ENST00000403750 PLEKHM2Q8IWE5 1019 aa14.38□□□□□ -0.11
PPARGC1B-204ENST00000403750 CFAP44Q96MT7 982 aa14.38□□□□□ -0.11
PPARGC1B-204ENST00000403750 HECW2Q9P2P5 1572 aa14.38□□□□□ -0.11
PPARGC1B-204ENST00000403750 ZBTB7CA1YPR0 619 aa14.38□□□□□ -0.11
PPARGC1B-204ENST00000403750 PTPRMP28827 1452 aa14.38□□□□□ -0.11
PPARGC1B-204ENST00000403750 RAB3GAP1Q15042 981 aa14.37□□□□□ -0.11
PPARGC1B-204ENST00000403750 AK9Q5TCS8 1911 aa14.37□□□□□ -0.11
PPARGC1B-204ENST00000403750 SNX21Q969T3 373 aa14.37□□□□□ -0.11
PPARGC1B-204ENST00000403750 MEIS3Q99687 375 aa14.37□□□□□ -0.11
PPARGC1B-204ENST00000403750 API5Q9BZZ5 524 aaKnown RBP14.37□□□□□ -0.11
PPARGC1B-204ENST00000403750 GOLGA6L22H0YM25 854 aa14.37□□□□□ -0.11
PPARGC1B-204ENST00000403750 FOXO3O43524 673 aa14.37□□□□□ -0.11
PPARGC1B-204ENST00000403750 SLC4A2P04920 1241 aa14.37□□□□□ -0.11
PPARGC1B-204ENST00000403750 ZMYM3Q14202 1370 aa14.37□□□□□ -0.11
PPARGC1B-204ENST00000403750 MYO5BQ9ULV0 1848 aa14.36□□□□□ -0.11
PPARGC1B-204ENST00000403750 WASLO00401 505 aaPredicted RBP14.36□□□□□ -0.11
PPARGC1B-204ENST00000403750 FAM69CQ0P6D2 419 aa14.36□□□□□ -0.11
PPARGC1B-204ENST00000403750 ERBB4Q15303 1308 aa14.36□□□□□ -0.11
PPARGC1B-204ENST00000403750 HSP90AB2PQ58FF8 381 aa14.36□□□□□ -0.11
PPARGC1B-204ENST00000403750 CHMP4BQ9H444 224 aaKnown RBP14.36□□□□□ -0.11
PPARGC1B-204ENST00000403750 ESF1Q9H501 851 aaKnown RBP14.36□□□□□ -0.11
PPARGC1B-204ENST00000403750 CAVIN1Q6NZI2 390 aaKnown RBP14.35□□□□□ -0.11
PPARGC1B-204ENST00000403750 ZGPATQ8N5A5 531 aaKnown RBP14.35□□□□□ -0.11
PPARGC1B-204ENST00000403750 PIK3C2BO00750 1634 aa14.35□□□□□ -0.11
PPARGC1B-204ENST00000403750 PNPLA6Q8IY17 1366 aa14.35□□□□□ -0.11
PPARGC1B-204ENST00000403750 NCBP3Q53F19 620 aaKnown RBP14.35□□□□□ -0.11
PPARGC1B-204ENST00000403750 FAM135BQ49AJ0 1406 aa14.35□□□□□ -0.11
PPARGC1B-204ENST00000403750 SDSP20132 328 aa14.34□□□□□ -0.11
PPARGC1B-204ENST00000403750 USP32Q8NFA0 1604 aa14.34□□□□□ -0.11
PPARGC1B-204ENST00000403750 ESPNB1AK53 854 aa14.34□□□□□ -0.11
PPARGC1B-204ENST00000403750 EXOC6BQ9Y2D4 811 aa14.34□□□□□ -0.11
PPARGC1B-204ENST00000403750 ABCC4O15439 1325 aa14.33□□□□□ -0.11
PPARGC1B-204ENST00000403750 DDIT3P35638 169 aa14.33□□□□□ -0.11
PPARGC1B-204ENST00000403750 NUTM2GQ5VZR2 741 aa14.33□□□□□ -0.11
PPARGC1B-204ENST00000403750 ARHGAP45Q92619 1136 aa14.33□□□□□ -0.11
PPARGC1B-204ENST00000403750 BAG4O95429 457 aaKnown RBP14.33□□□□□ -0.12
PPARGC1B-204ENST00000403750 LMOD3Q0VAK6 560 aa14.33□□□□□ -0.12
PPARGC1B-204ENST00000403750 TTC22Q5TAA0 569 aa14.33□□□□□ -0.12
PPARGC1B-204ENST00000403750 PRPF40AO75400 957 aaKnown RBP14.32□□□□□ -0.12
PPARGC1B-204ENST00000403750 EIF4A2Q14240 407 aaKnown RBP14.32□□□□□ -0.12
PPARGC1B-204ENST00000403750 G2E3Q7L622 706 aa14.32□□□□□ -0.12
PPARGC1B-204ENST00000403750 ZNF428Q96B54 188 aa14.32□□□□□ -0.12
PPARGC1B-204ENST00000403750 RBM27Q9P2N5 1060 aaKnown RBP14.32□□□□□ -0.12
PPARGC1B-204ENST00000403750 ZNF853P0CG23 659 aa14.32□□□□□ -0.12
PPARGC1B-204ENST00000403750 NASPP49321 788 aaPredicted RBP14.32□□□□□ -0.12
PPARGC1B-204ENST00000403750 RILPL2Q969X0 211 aa14.32□□□□□ -0.12
PPARGC1B-204ENST00000403750 CCDC61Q9Y6R9 512 aa14.32□□□□□ -0.12
PPARGC1B-204ENST00000403750 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.31□□□□□ -0.12
PPARGC1B-204ENST00000403750 ANP32BQ92688 251 aaKnown RBP14.31□□□□□ -0.12
PPARGC1B-204ENST00000403750 DCTPP1Q9H773 170 aa14.31□□□□□ -0.12
PPARGC1B-204ENST00000403750 TRIM6-TRIM34B2RNG4 842 aa14.31□□□□□ -0.12
PPARGC1B-204ENST00000403750 INTS3Q68E01 1043 aaKnown RBP14.31□□□□□ -0.12
PPARGC1B-204ENST00000403750 LTV1Q96GA3 475 aaPredicted RBP14.31□□□□□ -0.12
PPARGC1B-204ENST00000403750 MAP2P11137 1827 aaKnown RBP14.31□□□□□ -0.12
PPARGC1B-204ENST00000403750 DTNBO60941 627 aa14.3□□□□□ -0.12
PPARGC1B-204ENST00000403750 CEP85Q6P2H3 762 aa14.3□□□□□ -0.12
PPARGC1B-204ENST00000403750 CASC1Q6TDU7 716 aa14.3□□□□□ -0.12
PPARGC1B-204ENST00000403750 RIMS2Q9UQ26 1411 aa14.3□□□□□ -0.12
PPARGC1B-204ENST00000403750 MSH6P52701 1360 aa14.3□□□□□ -0.12
PPARGC1B-204ENST00000403750 USP26Q9BXU7 913 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms