RNA–Protein interactions for RNA: ENST00000400911.7

VAMP1-203, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-203ENST00000400911 SLIT3O75094 1523 aa20.96■□□□□ 0.95
VAMP1-203ENST00000400911 DCAF8L1A6NGE4 600 aa20.96■□□□□ 0.95
VAMP1-203ENST00000400911 CSB-PGBD3P0DP91 1061 aa20.96■□□□□ 0.95
VAMP1-203ENST00000400911 ZNF692Q9BU19 519 aaPredicted RBP20.96■□□□□ 0.95
VAMP1-203ENST00000400911 CDCA7Q9BWT1 371 aaPredicted RBP20.96■□□□□ 0.95
VAMP1-203ENST00000400911 TTC21BQ7Z4L5 1316 aa20.96■□□□□ 0.95
VAMP1-203ENST00000400911 PARP4Q9UKK3 1724 aaKnown RBP20.95■□□□□ 0.94
VAMP1-203ENST00000400911 KCNH5Q8NCM2 988 aa20.94■□□□□ 0.94
VAMP1-203ENST00000400911 CARD10Q9BWT7 1032 aa20.94■□□□□ 0.94
VAMP1-203ENST00000400911 NINLQ9Y2I6 1382 aa20.94■□□□□ 0.94
VAMP1-203ENST00000400911 ZBTB7AO95365 584 aa20.93■□□□□ 0.94
VAMP1-203ENST00000400911 EXOC5O00471 708 aa20.92■□□□□ 0.94
VAMP1-203ENST00000400911 CPSF1Q10570 1443 aaKnown RBP20.92■□□□□ 0.94
VAMP1-203ENST00000400911 PEAK1Q9H792 1746 aa20.92■□□□□ 0.94
VAMP1-203ENST00000400911 UTRNP46939 3433 aa20.91■□□□□ 0.94
VAMP1-203ENST00000400911 BCL9O00512 1426 aa20.9■□□□□ 0.94
VAMP1-203ENST00000400911 TXNRD1Q16881 649 aa20.9■□□□□ 0.94
VAMP1-203ENST00000400911 ATF5Q9Y2D1 282 aaPredicted RBP20.9■□□□□ 0.94
VAMP1-203ENST00000400911 LRRC37A3O60309 1634 aa20.89■□□□□ 0.94
VAMP1-203ENST00000400911 SIN3AQ96ST3 1273 aa20.89■□□□□ 0.93
VAMP1-203ENST00000400911 TTC21AQ8NDW8 1320 aa20.88■□□□□ 0.93
VAMP1-203ENST00000400911 PTGER2P43116 358 aa20.88■□□□□ 0.93
VAMP1-203ENST00000400911 PIK3C2AO00443 1686 aa20.87■□□□□ 0.93
VAMP1-203ENST00000400911 QRICH2Q9H0J4 1663 aa20.87■□□□□ 0.93
VAMP1-203ENST00000400911 STK32BQ9NY57 414 aa20.87■□□□□ 0.93
VAMP1-203ENST00000400911 ROCK2O75116 1388 aaKnown RBP20.86■□□□□ 0.93
VAMP1-203ENST00000400911 SLC15A2Q16348 729 aa20.86■□□□□ 0.93
VAMP1-203ENST00000400911 COL18A1P39060 1754 aa20.86■□□□□ 0.93
VAMP1-203ENST00000400911 NEUROD1Q13562 356 aa20.85■□□□□ 0.93
VAMP1-203ENST00000400911 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.85■□□□□ 0.93
VAMP1-203ENST00000400911 KTN1Q86UP2 1357 aaKnown RBP20.85■□□□□ 0.93
VAMP1-203ENST00000400911 CCDC7Q96M83 1385 aa20.84■□□□□ 0.93
VAMP1-203ENST00000400911 ACSBG1Q96GR2 724 aa20.83■□□□□ 0.93
VAMP1-203ENST00000400911 NLRP2Q9NX02 1062 aa20.82■□□□□ 0.92
VAMP1-203ENST00000400911 SYT17Q9BSW7 474 aa20.81■□□□□ 0.92
VAMP1-203ENST00000400911 FHDC1Q9C0D6 1143 aaPredicted RBP20.81■□□□□ 0.92
VAMP1-203ENST00000400911 RGPD3A6NKT7 1758 aaPredicted RBP20.8■□□□□ 0.92
VAMP1-203ENST00000400911 RGPD4Q7Z3J3 1758 aa20.8■□□□□ 0.92
VAMP1-203ENST00000400911 NFAT5O94916 1531 aa20.8■□□□□ 0.92
VAMP1-203ENST00000400911 MTFR1LQ9H019 292 aa20.8■□□□□ 0.92
VAMP1-203ENST00000400911 NME9Q86XW9 330 aa20.79■□□□□ 0.92
VAMP1-203ENST00000400911 CASZ1Q86V15 1759 aa20.79■□□□□ 0.92
VAMP1-203ENST00000400911 ERBB3P21860 1342 aa20.78■□□□□ 0.92
VAMP1-203ENST00000400911 TNS2Q63HR2 1409 aa20.78■□□□□ 0.92
VAMP1-203ENST00000400911 SBF2Q86WG5 1849 aa20.78■□□□□ 0.92
VAMP1-203ENST00000400911 TRPM1Q7Z4N2 1603 aa20.78■□□□□ 0.92
VAMP1-203ENST00000400911 USP31Q70CQ4 1352 aa20.77■□□□□ 0.92
VAMP1-203ENST00000400911 IL2RBP14784 551 aa20.77■□□□□ 0.92
VAMP1-203ENST00000400911 SGIP1Q9BQI5 828 aa20.77■□□□□ 0.92
VAMP1-203ENST00000400911 TMC1Q8TDI8 760 aa20.76■□□□□ 0.91
VAMP1-203ENST00000400911 ZNF784Q8NCA9 323 aaPredicted RBP20.75■□□□□ 0.91
VAMP1-203ENST00000400911 ANKRD24Q8TF21 1146 aa20.75■□□□□ 0.91
VAMP1-203ENST00000400911 SBNO2Q9Y2G9 1366 aa20.74■□□□□ 0.91
VAMP1-203ENST00000400911 SLC12A5Q9H2X9 1139 aa20.74■□□□□ 0.91
VAMP1-203ENST00000400911 ARXQ96QS3 562 aa20.73■□□□□ 0.91
VAMP1-203ENST00000400911 ZNF827Q17R98 1081 aa20.72■□□□□ 0.91
VAMP1-203ENST00000400911 HDGFL2Q7Z4V5 671 aaPredicted RBP20.72■□□□□ 0.91
VAMP1-203ENST00000400911 LRRC4BQ9NT99 713 aa20.72■□□□□ 0.91
VAMP1-203ENST00000400911 MYOM1P52179 1685 aa20.72■□□□□ 0.91
VAMP1-203ENST00000400911 CARD11Q9BXL7 1154 aa20.71■□□□□ 0.91
VAMP1-203ENST00000400911 ABCC6O95255 1503 aa20.71■□□□□ 0.91
VAMP1-203ENST00000400911 WNK3Q9BYP7 1800 aa20.71■□□□□ 0.91
VAMP1-203ENST00000400911 CD163L1Q9NR16 1453 aa20.7■□□□□ 0.9
VAMP1-203ENST00000400911 DDX54Q8TDD1 881 aaKnown RBP20.7■□□□□ 0.9
VAMP1-203ENST00000400911 AKAP12Q02952 1782 aa20.69■□□□□ 0.9
VAMP1-203ENST00000400911 RGPD5Q99666 1765 aa20.69■□□□□ 0.9
VAMP1-203ENST00000400911 LTV1Q96GA3 475 aaPredicted RBP20.67■□□□□ 0.9
VAMP1-203ENST00000400911 TERF2IPQ9NYB0 399 aa20.67■□□□□ 0.9
VAMP1-203ENST00000400911 IP6K1Q92551 441 aa20.66■□□□□ 0.9
VAMP1-203ENST00000400911 AKT1S1Q96B36 256 aa20.66■□□□□ 0.9
VAMP1-203ENST00000400911 GOLGB1Q14789 3259 aaKnown RBP20.66■□□□□ 0.9
VAMP1-203ENST00000400911 EDC4Q6P2E9 1401 aaKnown RBP20.65■□□□□ 0.9
VAMP1-203ENST00000400911 NHSQ6T4R5 1651 aa20.64■□□□□ 0.9
VAMP1-203ENST00000400911 SLC27A3Q5K4L6 730 aa20.64■□□□□ 0.89
VAMP1-203ENST00000400911 A0A1W2PP64 1363 aa20.63■□□□□ 0.89
VAMP1-203ENST00000400911 KCNQ4P56696 695 aa20.63■□□□□ 0.89
VAMP1-203ENST00000400911 GPR162Q16538 588 aa20.63■□□□□ 0.89
VAMP1-203ENST00000400911 SYTL4Q96C24 671 aaPredicted RBP20.63■□□□□ 0.89
VAMP1-203ENST00000400911 MAP3K5Q99683 1374 aa20.62■□□□□ 0.89
VAMP1-203ENST00000400911 PRIM1P49642 420 aaKnown RBP20.62■□□□□ 0.89
VAMP1-203ENST00000400911 KLHL34Q8N239 644 aa20.62■□□□□ 0.89
VAMP1-203ENST00000400911 MON2Q7Z3U7 1717 aa20.61■□□□□ 0.89
VAMP1-203ENST00000400911 FBLN1P23142 703 aa20.61■□□□□ 0.89
VAMP1-203ENST00000400911 SLC16A10Q8TF71 515 aa20.61■□□□□ 0.89
VAMP1-203ENST00000400911 TFCP2L1Q9NZI6 479 aa20.61■□□□□ 0.89
VAMP1-203ENST00000400911 PAPPAQ13219 1627 aa20.6■□□□□ 0.89
VAMP1-203ENST00000400911 PUS7Q96PZ0 661 aaKnown RBP20.6■□□□□ 0.89
VAMP1-203ENST00000400911 PNPLA7Q6ZV29 1317 aa20.59■□□□□ 0.89
VAMP1-203ENST00000400911 POLD1P28340 1107 aa20.59■□□□□ 0.89
VAMP1-203ENST00000400911 MAP3K19Q56UN5 1328 aa20.58■□□□□ 0.89
VAMP1-203ENST00000400911 AMPHP49418 695 aa20.58■□□□□ 0.89
VAMP1-203ENST00000400911 COG3Q96JB2 828 aa20.58■□□□□ 0.89
VAMP1-203ENST00000400911 HOXC9P31274 260 aa20.57■□□□□ 0.88
VAMP1-203ENST00000400911 C1QTNF8P60827 252 aa20.57■□□□□ 0.88
VAMP1-203ENST00000400911 PELP1Q8IZL8 1130 aaKnown RBP20.57■□□□□ 0.88
VAMP1-203ENST00000400911 ZCRB1Q8TBF4 217 aaKnown RBP20.57■□□□□ 0.88
VAMP1-203ENST00000400911 USP54Q70EL1 1684 aa20.56■□□□□ 0.88
VAMP1-203ENST00000400911 ANKRD36BQ8N2N9 1353 aa20.56■□□□□ 0.88
VAMP1-203ENST00000400911 SENP3-EIF4A1A0A087X0R7 540 aa20.55■□□□□ 0.88
VAMP1-203ENST00000400911 BTAF1O14981 1849 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms