RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 CHD4Q14839 1912 aa26.41■■□□□ 1.82
UFD1-202ENST00000399523 TOM1L2Q6ZVM7 507 aa26.4■■□□□ 1.82
UFD1-202ENST00000399523 CDCA7Q9BWT1 371 aaPredicted RBP26.4■■□□□ 1.82
UFD1-202ENST00000399523 FHDC1Q9C0D6 1143 aaPredicted RBP26.4■■□□□ 1.82
UFD1-202ENST00000399523 PPIP5K1Q6PFW1 1433 aa26.39■■□□□ 1.82
UFD1-202ENST00000399523 COL18A1P39060 1754 aa26.38■■□□□ 1.81
UFD1-202ENST00000399523 TXNRD1Q16881 649 aa26.38■■□□□ 1.81
UFD1-202ENST00000399523 STK32BQ9NY57 414 aa26.38■■□□□ 1.81
UFD1-202ENST00000399523 SLIT3O75094 1523 aa26.38■■□□□ 1.81
UFD1-202ENST00000399523 WNK3Q9BYP7 1800 aa26.37■■□□□ 1.81
UFD1-202ENST00000399523 ZBTB7CA1YPR0 619 aa26.37■■□□□ 1.81
UFD1-202ENST00000399523 NLRP6P59044 892 aa26.37■■□□□ 1.81
UFD1-202ENST00000399523 SLC15A2Q16348 729 aa26.37■■□□□ 1.81
UFD1-202ENST00000399523 SGIP1Q9BQI5 828 aa26.37■■□□□ 1.81
UFD1-202ENST00000399523 WDR17Q8IZU2 1322 aa26.37■■□□□ 1.81
UFD1-202ENST00000399523 AKAP12Q02952 1782 aa26.36■■□□□ 1.81
UFD1-202ENST00000399523 MTFR1LQ9H019 292 aa26.36■■□□□ 1.81
UFD1-202ENST00000399523 SENP3-EIF4A1A0A087X0R7 540 aa26.35■■□□□ 1.81
UFD1-202ENST00000399523 C1QTNF8P60827 252 aa26.35■■□□□ 1.81
UFD1-202ENST00000399523 SRPK2P78362 688 aaKnown RBP26.35■■□□□ 1.81
UFD1-202ENST00000399523 AXIN2Q9Y2T1 843 aa26.35■■□□□ 1.81
UFD1-202ENST00000399523 KIAA1210Q9ULL0 1709 aa26.34■■□□□ 1.81
UFD1-202ENST00000399523 USP6P35125 1406 aa26.33■■□□□ 1.81
UFD1-202ENST00000399523 CABP2Q9NPB3 220 aa26.32■■□□□ 1.8
UFD1-202ENST00000399523 CARD10Q9BWT7 1032 aa26.3■■□□□ 1.8
UFD1-202ENST00000399523 CABP1Q9NZU7 370 aa26.29■■□□□ 1.8
UFD1-202ENST00000399523 NBPF1Q3BBV0 1214 aa26.28■■□□□ 1.8
UFD1-202ENST00000399523 ARHGEF25Q86VW2 580 aa26.28■■□□□ 1.8
UFD1-202ENST00000399523 MAP3K5Q99683 1374 aa26.28■■□□□ 1.8
UFD1-202ENST00000399523 CPSF1Q10570 1443 aaKnown RBP26.28■■□□□ 1.8
UFD1-202ENST00000399523 EXOC5O00471 708 aa26.27■■□□□ 1.8
UFD1-202ENST00000399523 ARXQ96QS3 562 aa26.27■■□□□ 1.8
UFD1-202ENST00000399523 CENPJQ9HC77 1338 aaPredicted RBP26.27■■□□□ 1.8
UFD1-202ENST00000399523 PIK3C2AO00443 1686 aa26.27■■□□□ 1.8
UFD1-202ENST00000399523 RGPD5Q99666 1765 aa26.25■■□□□ 1.79
UFD1-202ENST00000399523 CSB-PGBD3P0DP91 1061 aa26.22■■□□□ 1.79
UFD1-202ENST00000399523 KCNH5Q8NCM2 988 aa26.22■■□□□ 1.79
UFD1-202ENST00000399523 PAPPAQ13219 1627 aa26.21■■□□□ 1.79
UFD1-202ENST00000399523 CCDC7Q96M83 1385 aa26.2■■□□□ 1.79
UFD1-202ENST00000399523 GOLGB1Q14789 3259 aaKnown RBP26.2■■□□□ 1.78
UFD1-202ENST00000399523 NHSQ6T4R5 1651 aa26.2■■□□□ 1.78
UFD1-202ENST00000399523 IFFO2Q5TF58 517 aa26.2■■□□□ 1.78
UFD1-202ENST00000399523 TNS2Q63HR2 1409 aa26.2■■□□□ 1.78
UFD1-202ENST00000399523 CEP350Q5VT06 3117 aa26.19■■□□□ 1.78
UFD1-202ENST00000399523 QRICH2Q9H0J4 1663 aa26.19■■□□□ 1.78
UFD1-202ENST00000399523 TRPM1Q7Z4N2 1603 aa26.19■■□□□ 1.78
UFD1-202ENST00000399523 TTC21BQ7Z4L5 1316 aa26.16■■□□□ 1.78
UFD1-202ENST00000399523 ZNF692Q9BU19 519 aaPredicted RBP26.16■■□□□ 1.78
UFD1-202ENST00000399523 GPR162Q16538 588 aa26.15■■□□□ 1.78
UFD1-202ENST00000399523 ACSBG1Q96GR2 724 aa26.14■■□□□ 1.78
UFD1-202ENST00000399523 NFAT5O94916 1531 aa26.14■■□□□ 1.77
UFD1-202ENST00000399523 ABCC6O95255 1503 aa26.14■■□□□ 1.77
UFD1-202ENST00000399523 GIGYF1O75420 1035 aaPredicted RBP26.13■■□□□ 1.77
UFD1-202ENST00000399523 ZNF827Q17R98 1081 aa26.13■■□□□ 1.77
UFD1-202ENST00000399523 KAT6BQ8WYB5 2073 aa26.13■■□□□ 1.77
UFD1-202ENST00000399523 SOX12O15370 315 aa26.12■■□□□ 1.77
UFD1-202ENST00000399523 TTC21AQ8NDW8 1320 aa26.12■■□□□ 1.77
UFD1-202ENST00000399523 LRRC4BQ9NT99 713 aa26.11■■□□□ 1.77
UFD1-202ENST00000399523 BTAF1O14981 1849 aa26.11■■□□□ 1.77
UFD1-202ENST00000399523 EVC2Q86UK5 1308 aa26.11■■□□□ 1.77
UFD1-202ENST00000399523 SLC16A10Q8TF71 515 aa26.1■■□□□ 1.77
UFD1-202ENST00000399523 COL24A1Q17RW2 1714 aa26.08■■□□□ 1.76
UFD1-202ENST00000399523 AKT1S1Q96B36 256 aa26.07■■□□□ 1.76
UFD1-202ENST00000399523 QSER1Q2KHR3 1735 aa26.06■■□□□ 1.76
UFD1-202ENST00000399523 ERBB3P21860 1342 aa26.06■■□□□ 1.76
UFD1-202ENST00000399523 IL2RBP14784 551 aa26.05■■□□□ 1.76
UFD1-202ENST00000399523 POLD1P28340 1107 aa26.04■■□□□ 1.76
UFD1-202ENST00000399523 NLRP2Q9NX02 1062 aa26.04■■□□□ 1.76
UFD1-202ENST00000399523 SHANK3Q9BYB0 1731 aa26.03■■□□□ 1.76
UFD1-202ENST00000399523 SLC27A3Q5K4L6 730 aa26.03■■□□□ 1.76
UFD1-202ENST00000399523 PNPLA7Q6ZV29 1317 aa26.01■■□□□ 1.75
UFD1-202ENST00000399523 KLHL34Q8N239 644 aa26.01■■□□□ 1.75
UFD1-202ENST00000399523 KTN1Q86UP2 1357 aaKnown RBP26■■□□□ 1.75
UFD1-202ENST00000399523 PELP1Q8IZL8 1130 aaKnown RBP26■■□□□ 1.75
UFD1-202ENST00000399523 USP31Q70CQ4 1352 aa25.99■■□□□ 1.75
UFD1-202ENST00000399523 NLGN2Q8NFZ4 835 aa25.99■■□□□ 1.75
UFD1-202ENST00000399523 USP54Q70EL1 1684 aa25.96■■□□□ 1.75
UFD1-202ENST00000399523 MON2Q7Z3U7 1717 aa25.95■■□□□ 1.74
UFD1-202ENST00000399523 GRIN3BO60391 1043 aa25.95■■□□□ 1.74
UFD1-202ENST00000399523 ANKRD24Q8TF21 1146 aa25.95■■□□□ 1.74
UFD1-202ENST00000399523 TFCP2L1Q9NZI6 479 aa25.95■■□□□ 1.74
UFD1-202ENST00000399523 TUBGCP6Q96RT7 1819 aa25.95■■□□□ 1.74
UFD1-202ENST00000399523 LTN1O94822 1766 aa25.95■■□□□ 1.74
UFD1-202ENST00000399523 YBX3P16989 372 aaKnown RBP eCLIP25.93■■□□□ 1.748e-15■□□□□ 11
UFD1-202ENST00000399523 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.92■■□□□ 1.74
UFD1-202ENST00000399523 NME9Q86XW9 330 aa25.9■■□□□ 1.74
UFD1-202ENST00000399523 KCNQ4P56696 695 aa25.89■■□□□ 1.74
UFD1-202ENST00000399523 DDX54Q8TDD1 881 aaKnown RBP25.89■■□□□ 1.74
UFD1-202ENST00000399523 SBNO2Q9Y2G9 1366 aa25.88■■□□□ 1.73
UFD1-202ENST00000399523 L3MBTL2Q969R5 705 aa25.88■■□□□ 1.73
UFD1-202ENST00000399523 LY75O60449 1722 aa25.88■■□□□ 1.73
UFD1-202ENST00000399523 ANKRD36BQ8N2N9 1353 aa25.86■■□□□ 1.73
UFD1-202ENST00000399523 PRIM1P49642 420 aaKnown RBP25.86■■□□□ 1.73
UFD1-202ENST00000399523 ATP10DQ9P241 1426 aa25.86■■□□□ 1.73
UFD1-202ENST00000399523 CD163L1Q9NR16 1453 aa25.85■■□□□ 1.73
UFD1-202ENST00000399523 ROCK2O75116 1388 aaKnown RBP25.83■■□□□ 1.73
UFD1-202ENST00000399523 NSD2O96028 1365 aa25.83■■□□□ 1.73
UFD1-202ENST00000399523 SYTL4Q96C24 671 aaPredicted RBP25.83■■□□□ 1.73
UFD1-202ENST00000399523 COL23A1Q86Y22 540 aaPredicted RBP25.82■■□□□ 1.72
UFD1-202ENST00000399523 IP6K1Q92551 441 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms