RNA–Protein interactions for RNA: ENST00000399448.5

PTPN6-202, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN6, Length 2,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-202ENST00000399448 SEC24BO95487 1268 aa17.4■□□□□ 0.38
PTPN6-202ENST00000399448 IFT57Q9NWB7 429 aa17.4■□□□□ 0.38
PTPN6-202ENST00000399448 GNAI1P63096 354 aa17.4■□□□□ 0.38
PTPN6-202ENST00000399448 C3P01024 1663 aa17.39■□□□□ 0.37
PTPN6-202ENST00000399448 LMOD3Q0VAK6 560 aa17.39■□□□□ 0.37
PTPN6-202ENST00000399448 ZBTB40Q9NUA8 1239 aa17.39■□□□□ 0.37
PTPN6-202ENST00000399448 PLEKHG1Q9ULL1 1385 aa17.39■□□□□ 0.37
PTPN6-202ENST00000399448 ITSN1Q15811 1721 aa17.39■□□□□ 0.37
PTPN6-202ENST00000399448 VAMP4O75379 141 aa17.38■□□□□ 0.37
PTPN6-202ENST00000399448 ZNF853P0CG23 659 aa17.38■□□□□ 0.37
PTPN6-202ENST00000399448 RRS1Q15050 365 aaKnown RBP17.38■□□□□ 0.37
PTPN6-202ENST00000399448 ARHGAP45Q92619 1136 aa17.37■□□□□ 0.37
PTPN6-202ENST00000399448 THUMPD2Q9BTF0 503 aaKnown RBP17.37■□□□□ 0.37
PTPN6-202ENST00000399448 PLEKHG3A1L390 1219 aa17.36■□□□□ 0.37
PTPN6-202ENST00000399448 LTKP29376 864 aa17.36■□□□□ 0.37
PTPN6-202ENST00000399448 SMC5Q8IY18 1101 aa17.36■□□□□ 0.37
PTPN6-202ENST00000399448 UPF2Q9HAU5 1272 aaKnown RBP17.36■□□□□ 0.37
PTPN6-202ENST00000399448 MRPL50Q8N5N7 158 aaKnown RBP17.36■□□□□ 0.37
PTPN6-202ENST00000399448 TTC21BQ7Z4L5 1316 aa17.36■□□□□ 0.37
PTPN6-202ENST00000399448 CFAP44Q96MT7 982 aa17.35■□□□□ 0.37
PTPN6-202ENST00000399448 CHMP4BQ9H444 224 aaKnown RBP17.35■□□□□ 0.37
PTPN6-202ENST00000399448 MBIPQ9NS73 344 aa17.35■□□□□ 0.37
PTPN6-202ENST00000399448 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.34■□□□□ 0.37
PTPN6-202ENST00000399448 ACEP12821 1306 aa17.33■□□□□ 0.37
PTPN6-202ENST00000399448 EID1Q9Y6B2 187 aa17.33■□□□□ 0.37
PTPN6-202ENST00000399448 BECN1Q14457 450 aa17.33■□□□□ 0.36
PTPN6-202ENST00000399448 NFKBIBQ15653 356 aa17.33■□□□□ 0.36
PTPN6-202ENST00000399448 TSPYL6Q8N831 410 aa17.33■□□□□ 0.36
PTPN6-202ENST00000399448 BCL11AQ9H165 835 aa17.32■□□□□ 0.36
PTPN6-202ENST00000399448 TBC1D32Q96NH3 1257 aa17.32■□□□□ 0.36
PTPN6-202ENST00000399448 PTCH1Q13635 1447 aa17.31■□□□□ 0.36
PTPN6-202ENST00000399448 TOPAZ1Q8N9V7 1692 aa17.31■□□□□ 0.36
PTPN6-202ENST00000399448 PIK3R4Q99570 1358 aa17.31■□□□□ 0.36
PTPN6-202ENST00000399448 TWISTNBQ3B726 338 aaPredicted RBP17.31■□□□□ 0.36
PTPN6-202ENST00000399448 NRKQ7Z2Y5 1582 aa17.31■□□□□ 0.36
PTPN6-202ENST00000399448 ZBTB7BO15156 539 aaPredicted RBP17.3■□□□□ 0.36
PTPN6-202ENST00000399448 EIF4A2Q14240 407 aaKnown RBP17.3■□□□□ 0.36
PTPN6-202ENST00000399448 OVOS2A0A0J9YW53 1432 aa17.3■□□□□ 0.36
PTPN6-202ENST00000399448 USP6P35125 1406 aa17.3■□□□□ 0.36
PTPN6-202ENST00000399448 OVOS2Q6IE36 1432 aa17.3■□□□□ 0.36
PTPN6-202ENST00000399448 SLC26A8Q96RN1 970 aa17.3■□□□□ 0.36
PTPN6-202ENST00000399448 DLG5Q8TDM6 1919 aa17.3■□□□□ 0.36
PTPN6-202ENST00000399448 CEBPAP49715 358 aaPredicted RBP17.29■□□□□ 0.36
PTPN6-202ENST00000399448 PTPRUQ92729 1446 aa17.29■□□□□ 0.36
PTPN6-202ENST00000399448 NUCB1Q02818 461 aa17.29■□□□□ 0.36
PTPN6-202ENST00000399448 SULT6B1Q6IMI4 303 aa17.29■□□□□ 0.36
PTPN6-202ENST00000399448 TBX22Q9Y458 520 aa17.29■□□□□ 0.36
PTPN6-202ENST00000399448 FAM83GA6ND36 823 aa17.28■□□□□ 0.36
PTPN6-202ENST00000399448 ELL2O00472 640 aaPredicted RBP17.28■□□□□ 0.36
PTPN6-202ENST00000399448 C8orf58Q8NAV2 365 aa17.28■□□□□ 0.36
PTPN6-202ENST00000399448 USP31Q70CQ4 1352 aa17.28■□□□□ 0.36
PTPN6-202ENST00000399448 NUTM2FA1L443 756 aa17.28■□□□□ 0.36
PTPN6-202ENST00000399448 AMOTL2Q9Y2J4 779 aa17.28■□□□□ 0.36
PTPN6-202ENST00000399448 ABCC4O15439 1325 aa17.27■□□□□ 0.36
PTPN6-202ENST00000399448 API5Q9BZZ5 524 aaKnown RBP17.27■□□□□ 0.36
PTPN6-202ENST00000399448 SSH2Q76I76 1423 aa17.27■□□□□ 0.35
PTPN6-202ENST00000399448 SLIT1O75093 1534 aa17.27■□□□□ 0.35
PTPN6-202ENST00000399448 ARHGAP23Q9P227 1491 aa17.26■□□□□ 0.35
PTPN6-202ENST00000399448 AEBP1Q8IUX7 1158 aa17.26■□□□□ 0.35
PTPN6-202ENST00000399448 PRKCSHP14314 528 aaPredicted RBP17.26■□□□□ 0.35
PTPN6-202ENST00000399448 DCTN1Q14203 1278 aa17.26■□□□□ 0.35
PTPN6-202ENST00000399448 TTC21AQ8NDW8 1320 aa17.26■□□□□ 0.35
PTPN6-202ENST00000399448 CHD1LQ86WJ1 897 aa17.25■□□□□ 0.35
PTPN6-202ENST00000399448 GCC1Q96CN9 775 aa17.25■□□□□ 0.35
PTPN6-202ENST00000399448 HAP1P54257 671 aaPredicted RBP17.25■□□□□ 0.35
PTPN6-202ENST00000399448 NALCNQ8IZF0 1738 aa17.24■□□□□ 0.35
PTPN6-202ENST00000399448 HSP90AB2PQ58FF8 381 aa17.24■□□□□ 0.35
PTPN6-202ENST00000399448 KIF24Q5T7B8 1368 aa17.23■□□□□ 0.35
PTPN6-202ENST00000399448 CHL1O00533 1208 aa17.23■□□□□ 0.35
PTPN6-202ENST00000399448 THEMISQ8N1K5 641 aaPredicted RBP17.23■□□□□ 0.35
PTPN6-202ENST00000399448 C22orf23Q9BZE7 217 aa17.22■□□□□ 0.35
PTPN6-202ENST00000399448 LNPKQ9C0E8 428 aa17.22■□□□□ 0.35
PTPN6-202ENST00000399448 PEAK1Q9H792 1746 aa17.21■□□□□ 0.35
PTPN6-202ENST00000399448 RGPD1P0DJD0 1748 aa17.21■□□□□ 0.35
PTPN6-202ENST00000399448 TBC1D2Q9BYX2 928 aa17.21■□□□□ 0.34
PTPN6-202ENST00000399448 MFAP1P55081 439 aaKnown RBP17.2■□□□□ 0.34
PTPN6-202ENST00000399448 ANKRD45Q5TZF3 282 aa17.2■□□□□ 0.34
PTPN6-202ENST00000399448 C1orf115Q9H7X2 142 aa17.2■□□□□ 0.34
PTPN6-202ENST00000399448 ARHGEF10O15013 1369 aa17.2■□□□□ 0.34
PTPN6-202ENST00000399448 KIAA0232Q92628 1395 aa17.2■□□□□ 0.34
PTPN6-202ENST00000399448 FRAT2O75474 233 aaPredicted RBP17.19■□□□□ 0.34
PTPN6-202ENST00000399448 NGDNQ8NEJ9 315 aaKnown RBP17.19■□□□□ 0.34
PTPN6-202ENST00000399448 MAP3K19Q56UN5 1328 aa17.19■□□□□ 0.34
PTPN6-202ENST00000399448 DIP2AQ14689 1571 aa17.19■□□□□ 0.34
PTPN6-202ENST00000399448 GSE1Q14687 1217 aa17.19■□□□□ 0.34
PTPN6-202ENST00000399448 MCM10Q7L590 875 aa17.19■□□□□ 0.34
PTPN6-202ENST00000399448 SIRT2Q8IXJ6 389 aa17.19■□□□□ 0.34
PTPN6-202ENST00000399448 SBNO1A3KN83 1393 aa17.18■□□□□ 0.34
PTPN6-202ENST00000399448 SOX12O15370 315 aa17.18■□□□□ 0.34
PTPN6-202ENST00000399448 BMP2KLQ5H9B9 411 aa17.18■□□□□ 0.34
PTPN6-202ENST00000399448 INTS3Q68E01 1043 aaKnown RBP17.18■□□□□ 0.34
PTPN6-202ENST00000399448 FLT4P35916 1363 aa17.17■□□□□ 0.34
PTPN6-202ENST00000399448 PLPPR3Q6T4P5 718 aa17.17■□□□□ 0.34
PTPN6-202ENST00000399448 ANTXR1Q9H6X2 564 aa17.17■□□□□ 0.34
PTPN6-202ENST00000399448 CRB1P82279 1406 aa17.16■□□□□ 0.34
PTPN6-202ENST00000399448 SLKQ9H2G2 1235 aaPredicted RBP17.15■□□□□ 0.34
PTPN6-202ENST00000399448 FER1L4A9Z1Z3 1794 aa17.15■□□□□ 0.34
PTPN6-202ENST00000399448 KRT24Q2M2I5 525 aa17.15■□□□□ 0.34
PTPN6-202ENST00000399448 ANKARQ7Z5J8 1434 aa17.15■□□□□ 0.34
PTPN6-202ENST00000399448 PTPRCP08575 1304 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms