RNA–Protein interactions for RNA: ENST00000399434.2

TNRC18-202, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2 BASIC

Gene TNRC18, Length 1,459 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-202ENST00000399434 IL13P35225 146 aa21.7■■□□□ 1.06
TNRC18-202ENST00000399434 CAMTA1Q9Y6Y1 1673 aa21.69■■□□□ 1.06
TNRC18-202ENST00000399434 CPDO75976 1380 aa21.69■■□□□ 1.06
TNRC18-202ENST00000399434 WDR43Q15061 677 aaKnown RBP eCLIP21.69■■□□□ 1.06
TNRC18-202ENST00000399434 FBXO41Q8TF61 875 aa21.69■■□□□ 1.06
TNRC18-202ENST00000399434 LRRC59Q96AG4 307 aaKnown RBP21.69■■□□□ 1.06
TNRC18-202ENST00000399434 EIF4A2Q14240 407 aaKnown RBP21.68■■□□□ 1.06
TNRC18-202ENST00000399434 AMPHP49418 695 aa21.67■■□□□ 1.06
TNRC18-202ENST00000399434 KIAA0232Q92628 1395 aa21.67■■□□□ 1.06
TNRC18-202ENST00000399434 ZC3H6P61129 1189 aaKnown RBP21.66■■□□□ 1.06
TNRC18-202ENST00000399434 IP6K1Q92551 441 aa21.66■■□□□ 1.06
TNRC18-202ENST00000399434 FAM208AQ9UK61 1670 aaKnown RBP21.64■■□□□ 1.05
TNRC18-202ENST00000399434 ZBTB7CA1YPR0 619 aa21.63■■□□□ 1.05
TNRC18-202ENST00000399434 U2SURPO15042 1029 aaKnown RBP21.63■■□□□ 1.05
TNRC18-202ENST00000399434 COL14A1Q05707 1796 aaKnown RBP21.62■■□□□ 1.05
TNRC18-202ENST00000399434 U2AF1L5P0DN76 240 aaPredicted RBP21.62■■□□□ 1.05
TNRC18-202ENST00000399434 U2AF1Q01081 240 aaKnown RBP eCLIP21.62■■□□□ 1.051e-7■■□□□ 11.7
TNRC18-202ENST00000399434 NUDCQ9Y266 331 aa21.62■■□□□ 1.05
TNRC18-202ENST00000399434 AXIN2Q9Y2T1 843 aa21.62■■□□□ 1.05
TNRC18-202ENST00000399434 HNRNPUQ00839 825 aaKnown RBP eCLIP21.61■■□□□ 1.052e-8■□□□□ 8.8
TNRC18-202ENST00000399434 CCDC146Q8IYE0 955 aa21.61■■□□□ 1.05
TNRC18-202ENST00000399434 PLCH1Q4KWH8 1693 aa21.61■■□□□ 1.05
TNRC18-202ENST00000399434 SENP3-EIF4A1A0A087X0R7 540 aa21.6■■□□□ 1.05
TNRC18-202ENST00000399434 NCAPD2Q15021 1401 aa21.6■■□□□ 1.05
TNRC18-202ENST00000399434 CHRNA2Q15822 529 aa21.6■■□□□ 1.05
TNRC18-202ENST00000399434 IGSF1Q8N6C5 1336 aa21.59■■□□□ 1.05
TNRC18-202ENST00000399434 RSPH6AQ9H0K4 717 aa21.58■■□□□ 1.05
TNRC18-202ENST00000399434 KDRP35968 1356 aa21.58■■□□□ 1.04
TNRC18-202ENST00000399434 NRAPQ86VF7 1730 aa21.58■■□□□ 1.04
TNRC18-202ENST00000399434 AEBP1Q8IUX7 1158 aa21.58■■□□□ 1.04
TNRC18-202ENST00000399434 PLEKHF1Q96S99 279 aa21.58■■□□□ 1.04
TNRC18-202ENST00000399434 LTV1Q96GA3 475 aaPredicted RBP21.57■■□□□ 1.04
TNRC18-202ENST00000399434 EYA1Q99502 592 aa21.57■■□□□ 1.04
TNRC18-202ENST00000399434 COL5A2P05997 1499 aaPredicted RBP21.56■■□□□ 1.04
TNRC18-202ENST00000399434 JCADQ9P266 1359 aa21.56■■□□□ 1.04
TNRC18-202ENST00000399434 ERBB3P21860 1342 aa21.56■■□□□ 1.04
TNRC18-202ENST00000399434 HMOX1P09601 288 aa21.56■■□□□ 1.04
TNRC18-202ENST00000399434 DLG5Q8TDM6 1919 aa21.55■■□□□ 1.04
TNRC18-202ENST00000399434 HSPA1LP34931 641 aa21.55■■□□□ 1.04
TNRC18-202ENST00000399434 HAP1P54257 671 aaPredicted RBP21.55■■□□□ 1.04
TNRC18-202ENST00000399434 PRDM11Q9NQV5 511 aa21.55■■□□□ 1.04
TNRC18-202ENST00000399434 ANKRD24Q8TF21 1146 aa21.54■■□□□ 1.04
TNRC18-202ENST00000399434 RUNDC1Q96C34 613 aa21.54■■□□□ 1.04
TNRC18-202ENST00000399434 LRP6O75581 1613 aa21.54■■□□□ 1.04
TNRC18-202ENST00000399434 ZBED9Q6R2W3 1325 aa21.54■■□□□ 1.04
TNRC18-202ENST00000399434 FCHSD2O94868 740 aa21.52■■□□□ 1.04
TNRC18-202ENST00000399434 PRKAR2BP31323 418 aa21.52■■□□□ 1.04
TNRC18-202ENST00000399434 SULT6B1Q6IMI4 303 aa21.52■■□□□ 1.04
TNRC18-202ENST00000399434 NWD2Q9ULI1 1742 aa21.52■■□□□ 1.04
TNRC18-202ENST00000399434 FAM83GA6ND36 823 aa21.52■■□□□ 1.03
TNRC18-202ENST00000399434 APAF1O14727 1248 aa21.52■■□□□ 1.03
TNRC18-202ENST00000399434 NBPF6Q5VWK0 638 aa21.52■■□□□ 1.03
TNRC18-202ENST00000399434 NBPF4Q96M43 638 aa21.52■■□□□ 1.03
TNRC18-202ENST00000399434 ILDR1Q86SU0 546 aaPredicted RBP21.5■■□□□ 1.03
TNRC18-202ENST00000399434 USHBP1Q8N6Y0 703 aa21.5■■□□□ 1.03
TNRC18-202ENST00000399434 TCP11L2Q8N4U5 519 aa21.49■■□□□ 1.03
TNRC18-202ENST00000399434 PHACTR3Q96KR7 559 aa21.49■■□□□ 1.03
TNRC18-202ENST00000399434 WNK3Q9BYP7 1800 aa21.47■■□□□ 1.03
TNRC18-202ENST00000399434 ZNF521Q96K83 1311 aa21.47■■□□□ 1.03
TNRC18-202ENST00000399434 RRP7AQ9Y3A4 280 aaKnown RBP21.46■■□□□ 1.03
TNRC18-202ENST00000399434 SLIT2O94813 1529 aa21.46■■□□□ 1.03
TNRC18-202ENST00000399434 NUTM2BA6NNL0 878 aaPredicted RBP21.45■■□□□ 1.03
TNRC18-202ENST00000399434 NUTM2EB1AL46 878 aaPredicted RBP21.45■■□□□ 1.03
TNRC18-202ENST00000399434 ADAMTS2O95450 1211 aa21.45■■□□□ 1.03
TNRC18-202ENST00000399434 NUTM2AQ8IVF1 878 aaPredicted RBP21.45■■□□□ 1.03
TNRC18-202ENST00000399434 SALL2Q9Y467 1007 aaPredicted RBP21.45■■□□□ 1.03
TNRC18-202ENST00000399434 WDR17Q8IZU2 1322 aa21.45■■□□□ 1.02
TNRC18-202ENST00000399434 MAPK8IP3Q9UPT6 1336 aa21.45■■□□□ 1.02
TNRC18-202ENST00000399434 PKD1L3Q7Z443 1732 aa21.45■■□□□ 1.02
TNRC18-202ENST00000399434 PHF23Q9BUL5 403 aaPredicted RBP21.45■■□□□ 1.02
TNRC18-202ENST00000399434 SPATA31A6Q5VVP1 1343 aa21.44■■□□□ 1.02
TNRC18-202ENST00000399434 PARP4Q9UKK3 1724 aaKnown RBP21.44■■□□□ 1.02
TNRC18-202ENST00000399434 MEGF6O75095 1541 aa21.44■■□□□ 1.02
TNRC18-202ENST00000399434 PNNQ9H307 717 aaKnown RBP21.43■■□□□ 1.02
TNRC18-202ENST00000399434 SHANK3Q9BYB0 1731 aa21.42■■□□□ 1.02
TNRC18-202ENST00000399434 TMPOP42166 694 aaKnown RBP21.42■■□□□ 1.02
TNRC18-202ENST00000399434 BTG4Q9NY30 223 aa21.42■■□□□ 1.02
TNRC18-202ENST00000399434 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.42■■□□□ 1.02
TNRC18-202ENST00000399434 NLRP2Q9NX02 1062 aa21.41■■□□□ 1.02
TNRC18-202ENST00000399434 VIRMAQ69YN4 1812 aaKnown RBP21.41■■□□□ 1.02
TNRC18-202ENST00000399434 LRRC37A3O60309 1634 aa21.4■■□□□ 1.02
TNRC18-202ENST00000399434 CSB-PGBD3P0DP91 1061 aa21.4■■□□□ 1.02
TNRC18-202ENST00000399434 NFE2L2Q16236 605 aa21.4■■□□□ 1.02
TNRC18-202ENST00000399434 LARP1Q6PKG0 1096 aaKnown RBP21.4■■□□□ 1.02
TNRC18-202ENST00000399434 NEUROD2Q15784 382 aa21.39■■□□□ 1.02
TNRC18-202ENST00000399434 NCBP3Q53F19 620 aaKnown RBP21.39■■□□□ 1.02
TNRC18-202ENST00000399434 CRB1P82279 1406 aa21.39■■□□□ 1.02
TNRC18-202ENST00000399434 TRIM35Q9UPQ4 493 aa21.39■■□□□ 1.01
TNRC18-202ENST00000399434 CCDC27Q2M243 656 aa21.38■■□□□ 1.01
TNRC18-202ENST00000399434 NGEFQ8N5V2 710 aa21.38■■□□□ 1.01
TNRC18-202ENST00000399434 STRN4Q9NRL3 753 aa21.38■■□□□ 1.01
TNRC18-202ENST00000399434 MTHFSDQ2M296 383 aaKnown RBP21.37■■□□□ 1.01
TNRC18-202ENST00000399434 WWC1Q8IX03 1113 aa21.37■■□□□ 1.01
TNRC18-202ENST00000399434 ADAMTS7Q9UKP4 1686 aa21.36■■□□□ 1.01
TNRC18-202ENST00000399434 BCL9LQ86UU0 1499 aa21.35■■□□□ 1.01
TNRC18-202ENST00000399434 OVOS2A0A0G2JMS6 1433 aa21.35■■□□□ 1.01
TNRC18-202ENST00000399434 RIPK4P57078 832 aa21.35■■□□□ 1.01
TNRC18-202ENST00000399434 TOM1L2Q6ZVM7 507 aa21.35■■□□□ 1.01
TNRC18-202ENST00000399434 CARD10Q9BWT7 1032 aa21.35■■□□□ 1.01
TNRC18-202ENST00000399434 PLEKHG2Q9H7P9 1386 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms