RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 EPS15P42566 896 aa10.24□□□□□ -0.77
CTNND1-205ENST00000399050 PPFIBP1Q86W92 1011 aa10.24□□□□□ -0.77
CTNND1-205ENST00000399050 NOL10Q9BSC4 688 aaKnown RBP10.24□□□□□ -0.77
CTNND1-205ENST00000399050 CAMK4Q16566 473 aa10.24□□□□□ -0.77
CTNND1-205ENST00000399050 MAP3K11Q16584 847 aa10.24□□□□□ -0.77
CTNND1-205ENST00000399050 MAGEC2Q9UBF1 373 aaPredicted RBP10.24□□□□□ -0.77
CTNND1-205ENST00000399050 RAD21O60216 631 aa10.24□□□□□ -0.77
CTNND1-205ENST00000399050 CCDC183Q5T5S1 534 aa10.24□□□□□ -0.77
CTNND1-205ENST00000399050 FILIP1Q7Z7B0 1213 aa10.24□□□□□ -0.77
CTNND1-205ENST00000399050 HSP90AB3PQ58FF7 597 aa10.23□□□□□ -0.77
CTNND1-205ENST00000399050 ARHGAP5Q13017 1502 aa10.23□□□□□ -0.77
CTNND1-205ENST00000399050 ATP2B1P20020 1258 aa10.23□□□□□ -0.77
CTNND1-205ENST00000399050 SRCIN1Q9C0H9 1055 aa10.23□□□□□ -0.77
CTNND1-205ENST00000399050 SLC12A5Q9H2X9 1139 aa10.23□□□□□ -0.77
CTNND1-205ENST00000399050 ZSCAN31Q96LW9 406 aaPredicted RBP10.23□□□□□ -0.77
CTNND1-205ENST00000399050 JAKMIP1Q96N16 626 aaKnown RBP10.23□□□□□ -0.77
CTNND1-205ENST00000399050 ZHX1Q9UKY1 873 aaPredicted RBP10.23□□□□□ -0.77
CTNND1-205ENST00000399050 CGNQ9P2M7 1197 aaKnown RBP10.23□□□□□ -0.77
CTNND1-205ENST00000399050 PPP4R3BQ5MIZ7 849 aa10.22□□□□□ -0.77
CTNND1-205ENST00000399050 VPS37DQ86XT2 251 aa10.22□□□□□ -0.77
CTNND1-205ENST00000399050 OFD1O75665 1012 aa10.22□□□□□ -0.77
CTNND1-205ENST00000399050 DACH1Q9UI36 760 aa10.22□□□□□ -0.77
CTNND1-205ENST00000399050 MYO6Q9UM54 1294 aa10.22□□□□□ -0.77
CTNND1-205ENST00000399050 DAPK1P53355 1430 aa10.22□□□□□ -0.77
CTNND1-205ENST00000399050 FAM193AP78312 1265 aa10.22□□□□□ -0.77
CTNND1-205ENST00000399050 PTPN14Q15678 1187 aa10.22□□□□□ -0.77
CTNND1-205ENST00000399050 CEP57L1Q8IYX8 460 aa10.22□□□□□ -0.77
CTNND1-205ENST00000399050 UPF3BQ9BZI7 483 aaKnown RBP10.22□□□□□ -0.77
CTNND1-205ENST00000399050 HSP90AB2PQ58FF8 381 aa10.21□□□□□ -0.77
CTNND1-205ENST00000399050 CWC27Q6UX04 472 aaKnown RBP10.21□□□□□ -0.77
CTNND1-205ENST00000399050 JMYQ8N9B5 988 aa10.21□□□□□ -0.77
CTNND1-205ENST00000399050 CFAP45Q9UL16 551 aa10.21□□□□□ -0.77
CTNND1-205ENST00000399050 C9orf84Q5VXU9 1444 aa10.21□□□□□ -0.77
CTNND1-205ENST00000399050 FYB1O15117 783 aa10.21□□□□□ -0.77
CTNND1-205ENST00000399050 RARSP54136 660 aaKnown RBP10.21□□□□□ -0.77
CTNND1-205ENST00000399050 TMCO3Q6UWJ1 677 aa10.21□□□□□ -0.77
CTNND1-205ENST00000399050 GAS2L2Q8NHY3 880 aa10.21□□□□□ -0.77
CTNND1-205ENST00000399050 UBXN4Q92575 508 aa10.21□□□□□ -0.77
CTNND1-205ENST00000399050 CCDC102AQ96A19 550 aa10.21□□□□□ -0.77
CTNND1-205ENST00000399050 PRXQ9BXM0 1461 aa10.21□□□□□ -0.78
CTNND1-205ENST00000399050 HECW1Q76N89 1606 aa10.21□□□□□ -0.78
CTNND1-205ENST00000399050 DYNC1I1O14576 645 aa10.21□□□□□ -0.78
CTNND1-205ENST00000399050 LRPPRCP42704 1394 aaKnown RBP10.21□□□□□ -0.78
CTNND1-205ENST00000399050 NAIPQ13075 1403 aa10.2□□□□□ -0.78
CTNND1-205ENST00000399050 CASTP20810 708 aaKnown RBP10.2□□□□□ -0.78
CTNND1-205ENST00000399050 CLCN1P35523 988 aa10.2□□□□□ -0.78
CTNND1-205ENST00000399050 PPP6R1Q9UPN7 881 aa10.2□□□□□ -0.78
CTNND1-205ENST00000399050 GOLGA6L10A6NI86 522 aa10.2□□□□□ -0.78
CTNND1-205ENST00000399050 PIP4K2AP48426 406 aaPredicted RBP10.2□□□□□ -0.78
CTNND1-205ENST00000399050 CT47A1Q5JQC4 288 aaPredicted RBP10.2□□□□□ -0.78
CTNND1-205ENST00000399050 BLOC1S2Q6QNY1 142 aa10.2□□□□□ -0.78
CTNND1-205ENST00000399050 ZNHIT6Q9NWK9 470 aaKnown RBP10.2□□□□□ -0.78
CTNND1-205ENST00000399050 USP25Q9UHP3 1055 aa10.2□□□□□ -0.78
CTNND1-205ENST00000399050 TOP2BQ02880 1626 aa10.2□□□□□ -0.78
CTNND1-205ENST00000399050 NCOA1Q15788 1441 aa10.2□□□□□ -0.78
CTNND1-205ENST00000399050 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.2□□□□□ -0.78
CTNND1-205ENST00000399050 DEF6Q9H4E7 631 aa10.2□□□□□ -0.78
CTNND1-205ENST00000399050 SPDYE4A6NLX3 237 aa10.2□□□□□ -0.78
CTNND1-205ENST00000399050 MCM5P33992 734 aa10.2□□□□□ -0.78
CTNND1-205ENST00000399050 SART3Q15020 963 aaKnown RBP10.2□□□□□ -0.78
CTNND1-205ENST00000399050 TCEAL9Q9UHQ7 104 aa10.2□□□□□ -0.78
CTNND1-205ENST00000399050 SMTNL1A8MU46 457 aa10.2□□□□□ -0.78
CTNND1-205ENST00000399050 PLCD4Q9BRC7 762 aa10.2□□□□□ -0.78
CTNND1-205ENST00000399050 CCDC181Q5TID7 509 aa10.19□□□□□ -0.78
CTNND1-205ENST00000399050 TBC1D32Q96NH3 1257 aa10.19□□□□□ -0.78
CTNND1-205ENST00000399050 RBM27Q9P2N5 1060 aaKnown RBP10.19□□□□□ -0.78
CTNND1-205ENST00000399050 SMARCA5O60264 1052 aaPredicted RBP10.19□□□□□ -0.78
CTNND1-205ENST00000399050 KIF2AO00139 706 aaPredicted RBP10.19□□□□□ -0.78
CTNND1-205ENST00000399050 TNNT1P13805 278 aa10.19□□□□□ -0.78
CTNND1-205ENST00000399050 CCDC83Q8IWF9 413 aa10.19□□□□□ -0.78
CTNND1-205ENST00000399050 USP8P40818 1118 aa10.19□□□□□ -0.78
CTNND1-205ENST00000399050 PSME1Q06323 249 aa10.19□□□□□ -0.78
CTNND1-205ENST00000399050 CALCOCO1Q9P1Z2 691 aa10.19□□□□□ -0.78
CTNND1-205ENST00000399050 IGHDP01880 384 aa10.18□□□□□ -0.78
CTNND1-205ENST00000399050 XRCC6P12956 609 aaKnown RBP eCLIP10.18□□□□□ -0.782e-8■□□□□ 8.5
CTNND1-205ENST00000399050 TXLNAP40222 546 aa10.18□□□□□ -0.78
CTNND1-205ENST00000399050 ZSCAN23Q3MJ62 389 aa10.18□□□□□ -0.78
CTNND1-205ENST00000399050 RPAP2Q8IXW5 612 aaPredicted RBP10.18□□□□□ -0.78
CTNND1-205ENST00000399050 KIF18AQ8NI77 898 aa10.18□□□□□ -0.78
CTNND1-205ENST00000399050 CLIP2Q9UDT6 1046 aa10.18□□□□□ -0.78
CTNND1-205ENST00000399050 TMPOP42166 694 aaKnown RBP10.18□□□□□ -0.78
CTNND1-205ENST00000399050 NUTM2GQ5VZR2 741 aa10.18□□□□□ -0.78
CTNND1-205ENST00000399050 TRIM34Q9BYJ4 488 aa10.18□□□□□ -0.78
CTNND1-205ENST00000399050 SIL1Q9H173 461 aa10.18□□□□□ -0.78
CTNND1-205ENST00000399050 BAG4O95429 457 aaKnown RBP10.18□□□□□ -0.78
CTNND1-205ENST00000399050 ADCY5O95622 1261 aa10.18□□□□□ -0.78
CTNND1-205ENST00000399050 PLEKHH1Q9ULM0 1364 aa10.18□□□□□ -0.78
CTNND1-205ENST00000399050 POLA1P09884 1462 aaPredicted RBP10.18□□□□□ -0.78
CTNND1-205ENST00000399050 CASQ1P31415 396 aa10.18□□□□□ -0.78
CTNND1-205ENST00000399050 EVA1CP58658 441 aa10.18□□□□□ -0.78
CTNND1-205ENST00000399050 TRHP20396 242 aaPredicted RBP10.18□□□□□ -0.78
CTNND1-205ENST00000399050 DUSP27Q5VZP5 1158 aa10.18□□□□□ -0.78
CTNND1-205ENST00000399050 STK11IPQ8N1F8 1099 aa10.18□□□□□ -0.78
CTNND1-205ENST00000399050 IL1RAPL2Q9NP60 686 aa10.18□□□□□ -0.78
CTNND1-205ENST00000399050 PCF11O94913 1555 aaKnown RBP10.17□□□□□ -0.78
CTNND1-205ENST00000399050 TTC39AQ5SRH9 613 aa10.17□□□□□ -0.78
CTNND1-205ENST00000399050 C16orf45Q96MC5 204 aaPredicted RBP10.17□□□□□ -0.78
CTNND1-205ENST00000399050 NSD3Q9BZ95 1437 aa10.17□□□□□ -0.78
CTNND1-205ENST00000399050 SULT6B1Q6IMI4 303 aa10.17□□□□□ -0.78
CTNND1-205ENST00000399050 AACSQ86V21 672 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms