RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 TBX22Q9Y458 520 aa14.3□□□□□ -0.12
PUM3-202ENST00000397885 NWD1Q149M9 1564 aa14.29□□□□□ -0.12
PUM3-202ENST00000397885 TMEM51Q9NW97 253 aa14.29□□□□□ -0.12
PUM3-202ENST00000397885 CHD2O14647 1828 aaKnown RBP14.29□□□□□ -0.12
PUM3-202ENST00000397885 TRPM2O94759 1503 aa14.29□□□□□ -0.12
PUM3-202ENST00000397885 ALKQ9UM73 1620 aa14.29□□□□□ -0.12
PUM3-202ENST00000397885 DIP2AQ14689 1571 aa14.28□□□□□ -0.12
PUM3-202ENST00000397885 BCAR3O75815 825 aa14.28□□□□□ -0.12
PUM3-202ENST00000397885 HSP90AB1P08238 724 aaKnown RBP14.28□□□□□ -0.12
PUM3-202ENST00000397885 XPCQ01831 940 aaPredicted RBP14.28□□□□□ -0.12
PUM3-202ENST00000397885 PROSER2Q86WR7 435 aaPredicted RBP14.28□□□□□ -0.12
PUM3-202ENST00000397885 MYRIPQ8NFW9 859 aa14.28□□□□□ -0.12
PUM3-202ENST00000397885 PDZRN3Q9UPQ7 1066 aa14.28□□□□□ -0.12
PUM3-202ENST00000397885 PRIMPOLQ96LW4 560 aa14.27□□□□□ -0.12
PUM3-202ENST00000397885 RWDD1Q9H446 243 aaPredicted RBP14.27□□□□□ -0.12
PUM3-202ENST00000397885 KIF1BO60333 1816 aa14.27□□□□□ -0.12
PUM3-202ENST00000397885 GTF2F1P35269 517 aaKnown RBP eCLIP14.27□□□□□ -0.13
PUM3-202ENST00000397885 CCDC39Q9UFE4 941 aa14.27□□□□□ -0.13
PUM3-202ENST00000397885 CLTCL1P53675 1640 aa14.26□□□□□ -0.13
PUM3-202ENST00000397885 HMGN5P82970 282 aaKnown RBP14.26□□□□□ -0.13
PUM3-202ENST00000397885 CDCA8Q53HL2 280 aa14.26□□□□□ -0.13
PUM3-202ENST00000397885 TMEM94Q12767 1356 aa14.26□□□□□ -0.13
PUM3-202ENST00000397885 PIK3R4Q99570 1358 aa14.25□□□□□ -0.13
PUM3-202ENST00000397885 HSPA1LP34931 641 aa14.25□□□□□ -0.13
PUM3-202ENST00000397885 NUTM2DQ5VT03 806 aaPredicted RBP14.25□□□□□ -0.13
PUM3-202ENST00000397885 KNSTRNQ9Y448 316 aa14.25□□□□□ -0.13
PUM3-202ENST00000397885 ADAMTS13Q76LX8 1427 aa14.24□□□□□ -0.13
PUM3-202ENST00000397885 PIK3C2GO75747 1445 aa14.24□□□□□ -0.13
PUM3-202ENST00000397885 SENP3Q9H4L4 574 aaPredicted RBP14.24□□□□□ -0.13
PUM3-202ENST00000397885 VGFO15240 615 aaPredicted RBP14.23□□□□□ -0.13
PUM3-202ENST00000397885 CHMP4BQ9H444 224 aaKnown RBP14.23□□□□□ -0.13
PUM3-202ENST00000397885 COG6Q9Y2V7 657 aa14.23□□□□□ -0.13
PUM3-202ENST00000397885 DDX49Q9Y6V7 483 aaKnown RBP14.23□□□□□ -0.13
PUM3-202ENST00000397885 MFAP1P55081 439 aaKnown RBP14.23□□□□□ -0.13
PUM3-202ENST00000397885 PPP2R1AP30153 589 aa14.22□□□□□ -0.13
PUM3-202ENST00000397885 SETBP1Q9Y6X0 1596 aa14.21□□□□□ -0.13
PUM3-202ENST00000397885 NEXMIFQ5QGS0 1516 aa14.2□□□□□ -0.14
PUM3-202ENST00000397885 ASXL1Q8IXJ9 1541 aa14.2□□□□□ -0.14
PUM3-202ENST00000397885 PCDHB15Q9Y5E8 787 aa14.2□□□□□ -0.14
PUM3-202ENST00000397885 MSH6P52701 1360 aa14.2□□□□□ -0.14
PUM3-202ENST00000397885 PANK1Q8TE04 598 aa14.2□□□□□ -0.14
PUM3-202ENST00000397885 RPGRIP1LQ68CZ1 1315 aa14.19□□□□□ -0.14
PUM3-202ENST00000397885 FAM135BQ49AJ0 1406 aa14.19□□□□□ -0.14
PUM3-202ENST00000397885 KIAA2012Q0VF49 1180 aa14.19□□□□□ -0.14
PUM3-202ENST00000397885 NRXN3Q9Y4C0 1643 aa14.19□□□□□ -0.14
PUM3-202ENST00000397885 SLC20A2Q08357 652 aa14.19□□□□□ -0.14
PUM3-202ENST00000397885 SPINK5Q9NQ38 1064 aaPredicted RBP14.19□□□□□ -0.14
PUM3-202ENST00000397885 NPC1L1Q9UHC9 1359 aa14.18□□□□□ -0.14
PUM3-202ENST00000397885 BAG4O95429 457 aaKnown RBP14.18□□□□□ -0.14
PUM3-202ENST00000397885 CBX1P83916 185 aa14.18□□□□□ -0.14
PUM3-202ENST00000397885 ZSCAN23Q3MJ62 389 aa14.18□□□□□ -0.14
PUM3-202ENST00000397885 ARID3AQ99856 593 aa14.18□□□□□ -0.14
PUM3-202ENST00000397885 ZNF710Q8N1W2 664 aa14.18□□□□□ -0.14
PUM3-202ENST00000397885 RBM33Q96EV2 1170 aaKnown RBP14.18□□□□□ -0.14
PUM3-202ENST00000397885 RBSNQ9H1K0 784 aa14.18□□□□□ -0.14
PUM3-202ENST00000397885 AMOTL2Q9Y2J4 779 aa14.18□□□□□ -0.14
PUM3-202ENST00000397885 AMER1Q5JTC6 1135 aaPredicted RBP14.16□□□□□ -0.14
PUM3-202ENST00000397885 K7ELQ4 463 aaPredicted RBP14.16□□□□□ -0.14
PUM3-202ENST00000397885 FEZ1Q99689 392 aa14.16□□□□□ -0.14
PUM3-202ENST00000397885 PTPRUQ92729 1446 aa14.15□□□□□ -0.14
PUM3-202ENST00000397885 KIAA1210Q9ULL0 1709 aa14.15□□□□□ -0.14
PUM3-202ENST00000397885 C14orf37Q86TY3 774 aa14.15□□□□□ -0.14
PUM3-202ENST00000397885 KIF3AQ9Y496 699 aa14.15□□□□□ -0.14
PUM3-202ENST00000397885 MYOM1P52179 1685 aa14.15□□□□□ -0.14
PUM3-202ENST00000397885 XRN1Q8IZH2 1706 aaKnown RBP14.15□□□□□ -0.14
PUM3-202ENST00000397885 CDK11BP21127 795 aaKnown RBP14.14□□□□□ -0.15
PUM3-202ENST00000397885 ATP2B3Q16720 1220 aa14.14□□□□□ -0.15
PUM3-202ENST00000397885 SLAIN2Q9P270 581 aa14.14□□□□□ -0.15
PUM3-202ENST00000397885 ROBO1Q9Y6N7 1651 aa14.14□□□□□ -0.15
PUM3-202ENST00000397885 PPLO60437 1756 aa14.14□□□□□ -0.15
PUM3-202ENST00000397885 NUCB2P80303 420 aa14.14□□□□□ -0.15
PUM3-202ENST00000397885 C19orf44Q9H6X5 657 aa14.14□□□□□ -0.15
PUM3-202ENST00000397885 APAF1O14727 1248 aa14.13□□□□□ -0.15
PUM3-202ENST00000397885 HDAC1Q13547 482 aaPredicted RBP14.13□□□□□ -0.15
PUM3-202ENST00000397885 MED1Q15648 1581 aaPredicted RBP14.13□□□□□ -0.15
PUM3-202ENST00000397885 SSFA2P28290 1259 aa14.13□□□□□ -0.15
PUM3-202ENST00000397885 LRSAM1Q6UWE0 723 aa14.13□□□□□ -0.15
PUM3-202ENST00000397885 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.13□□□□□ -0.15
PUM3-202ENST00000397885 METP08581 1390 aa14.12□□□□□ -0.15
PUM3-202ENST00000397885 PRIM1P49642 420 aaKnown RBP14.12□□□□□ -0.15
PUM3-202ENST00000397885 RARSP54136 660 aaKnown RBP14.12□□□□□ -0.15
PUM3-202ENST00000397885 GABPB1Q06547 395 aaPredicted RBP14.12□□□□□ -0.15
PUM3-202ENST00000397885 CAVIN1Q6NZI2 390 aaKnown RBP14.12□□□□□ -0.15
PUM3-202ENST00000397885 CADPS2Q86UW7 1296 aa14.12□□□□□ -0.15
PUM3-202ENST00000397885 FTSJ3Q8IY81 847 aaKnown RBP14.12□□□□□ -0.15
PUM3-202ENST00000397885 ZNF830Q96NB3 372 aaPredicted RBP14.12□□□□□ -0.15
PUM3-202ENST00000397885 PIBF1Q8WXW3 757 aa14.12□□□□□ -0.15
PUM3-202ENST00000397885 LMBRD1Q9NUN5 540 aa14.12□□□□□ -0.15
PUM3-202ENST00000397885 ATF3P18847 181 aa14.11□□□□□ -0.15
PUM3-202ENST00000397885 PDCL2Q8N4E4 241 aa14.11□□□□□ -0.15
PUM3-202ENST00000397885 KIF16BQ96L93 1317 aa14.11□□□□□ -0.15
PUM3-202ENST00000397885 DNTTIP2Q5QJE6 756 aaKnown RBP14.1□□□□□ -0.15
PUM3-202ENST00000397885 MVPQ14764 893 aaKnown RBP14.09□□□□□ -0.15
PUM3-202ENST00000397885 DNAJC2Q99543 621 aaKnown RBP14.09□□□□□ -0.15
PUM3-202ENST00000397885 KIF2CQ99661 725 aa14.09□□□□□ -0.15
PUM3-202ENST00000397885 SETD1AO15047 1707 aaKnown RBP14.09□□□□□ -0.15
PUM3-202ENST00000397885 CYP2E1P05181 493 aaPredicted RBP14.09□□□□□ -0.15
PUM3-202ENST00000397885 ILDR2Q71H61 639 aa14.09□□□□□ -0.15
PUM3-202ENST00000397885 OGFRQ9NZT2 677 aa14.09□□□□□ -0.15
PUM3-202ENST00000397885 DCCP43146 1447 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms