RNA–Protein interactions for RNA: ENST00000397113.6

FGFR1-209, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene FGFR1, Length 3,680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-209ENST00000397113 CHAMP1Q96JM3 812 aa12.74□□□□□ -0.37
FGFR1-209ENST00000397113 PODXL2Q9NZ53 605 aa12.74□□□□□ -0.37
FGFR1-209ENST00000397113 SCAF11Q99590 1463 aaKnown RBP12.73□□□□□ -0.37
FGFR1-209ENST00000397113 NPC1L1Q9UHC9 1359 aa12.73□□□□□ -0.37
FGFR1-209ENST00000397113 TMEM57Q8N5G2 664 aa12.73□□□□□ -0.37
FGFR1-209ENST00000397113 SSH1Q8WYL5 1049 aa12.73□□□□□ -0.37
FGFR1-209ENST00000397113 FSD2A1L4K1 749 aa12.72□□□□□ -0.37
FGFR1-209ENST00000397113 TRIM27P14373 513 aa12.72□□□□□ -0.37
FGFR1-209ENST00000397113 KIF3BO15066 747 aa12.72□□□□□ -0.37
FGFR1-209ENST00000397113 RPGRIP1LQ68CZ1 1315 aa12.72□□□□□ -0.37
FGFR1-209ENST00000397113 FMN2Q9NZ56 1722 aa12.71□□□□□ -0.37
FGFR1-209ENST00000397113 CD2BP2O95400 341 aaKnown RBP12.71□□□□□ -0.38
FGFR1-209ENST00000397113 GGNBP2Q9H3C7 697 aa12.71□□□□□ -0.38
FGFR1-209ENST00000397113 PRPF40AO75400 957 aaKnown RBP12.7□□□□□ -0.38
FGFR1-209ENST00000397113 AFAP1Q8N556 730 aa12.7□□□□□ -0.38
FGFR1-209ENST00000397113 RBM27Q9P2N5 1060 aaKnown RBP12.7□□□□□ -0.38
FGFR1-209ENST00000397113 CAMTA1Q9Y6Y1 1673 aa12.7□□□□□ -0.38
FGFR1-209ENST00000397113 PUS7Q96PZ0 661 aaKnown RBP12.7□□□□□ -0.38
FGFR1-209ENST00000397113 TULP4Q9NRJ4 1543 aa12.7□□□□□ -0.38
FGFR1-209ENST00000397113 THUMPD2Q9BTF0 503 aaKnown RBP12.69□□□□□ -0.38
FGFR1-209ENST00000397113 DDX19BQ9UMR2 479 aa12.69□□□□□ -0.38
FGFR1-209ENST00000397113 SRPK2P78362 688 aaKnown RBP12.69□□□□□ -0.38
FGFR1-209ENST00000397113 RIPK4P57078 832 aa12.69□□□□□ -0.38
FGFR1-209ENST00000397113 FBLN1P23142 703 aa12.68□□□□□ -0.38
FGFR1-209ENST00000397113 ZHX1Q9UKY1 873 aaPredicted RBP12.68□□□□□ -0.38
FGFR1-209ENST00000397113 TRMT2AQ8IZ69 625 aaKnown RBP12.68□□□□□ -0.38
FGFR1-209ENST00000397113 RGPD1P0DJD0 1748 aa12.68□□□□□ -0.38
FGFR1-209ENST00000397113 GAS2L2Q8NHY3 880 aa12.68□□□□□ -0.38
FGFR1-209ENST00000397113 ATF7IPQ6VMQ6 1270 aa12.67□□□□□ -0.38
FGFR1-209ENST00000397113 CEP170BQ9Y4F5 1589 aaPredicted RBP12.67□□□□□ -0.38
FGFR1-209ENST00000397113 UQCRHLA0A096LP55 91 aa12.67□□□□□ -0.38
FGFR1-209ENST00000397113 FAM177BA6PVY3 158 aa12.67□□□□□ -0.38
FGFR1-209ENST00000397113 UQCRHP07919 91 aa12.67□□□□□ -0.38
FGFR1-209ENST00000397113 KANK1Q14678 1352 aa12.67□□□□□ -0.38
FGFR1-209ENST00000397113 ZSCAN30Q86W11 494 aa12.67□□□□□ -0.38
FGFR1-209ENST00000397113 CABP2Q9NPB3 220 aa12.67□□□□□ -0.38
FGFR1-209ENST00000397113 XIRP1Q702N8 1843 aaKnown RBP12.66□□□□□ -0.38
FGFR1-209ENST00000397113 SKOR2Q2VWA4 1001 aaPredicted RBP12.66□□□□□ -0.38
FGFR1-209ENST00000397113 MST1RQ04912 1400 aa12.66□□□□□ -0.38
FGFR1-209ENST00000397113 K7ELQ4 463 aaPredicted RBP12.66□□□□□ -0.38
FGFR1-209ENST00000397113 HMOX1P09601 288 aa12.66□□□□□ -0.38
FGFR1-209ENST00000397113 CHD1LQ86WJ1 897 aa12.66□□□□□ -0.38
FGFR1-209ENST00000397113 ADGRF5Q8IZF2 1346 aa12.65□□□□□ -0.38
FGFR1-209ENST00000397113 TPM2P07951 284 aa12.65□□□□□ -0.38
FGFR1-209ENST00000397113 GGT6Q6P531 493 aa12.65□□□□□ -0.38
FGFR1-209ENST00000397113 TSC1Q92574 1164 aa12.65□□□□□ -0.38
FGFR1-209ENST00000397113 IPO8O15397 1037 aaKnown RBP12.65□□□□□ -0.39
FGFR1-209ENST00000397113 CCDC173Q0VFZ6 552 aa12.65□□□□□ -0.39
FGFR1-209ENST00000397113 PKP1Q13835 747 aa12.65□□□□□ -0.39
FGFR1-209ENST00000397113 SYCE3A1L190 88 aa12.64□□□□□ -0.39
FGFR1-209ENST00000397113 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.64□□□□□ -0.39
FGFR1-209ENST00000397113 PDCL3Q9H2J4 239 aa12.64□□□□□ -0.39
FGFR1-209ENST00000397113 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.64□□□□□ -0.39
FGFR1-209ENST00000397113 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.64□□□□□ -0.39
FGFR1-209ENST00000397113 NSD3Q9BZ95 1437 aa12.63□□□□□ -0.39
FGFR1-209ENST00000397113 SOX12O15370 315 aa12.63□□□□□ -0.39
FGFR1-209ENST00000397113 TBC1D9Q6ZT07 1266 aa12.63□□□□□ -0.39
FGFR1-209ENST00000397113 DTNBO60941 627 aa12.63□□□□□ -0.39
FGFR1-209ENST00000397113 BAG4O95429 457 aaKnown RBP12.63□□□□□ -0.39
FGFR1-209ENST00000397113 ZNF830Q96NB3 372 aaPredicted RBP12.62□□□□□ -0.39
FGFR1-209ENST00000397113 PRIM1P49642 420 aaKnown RBP12.62□□□□□ -0.39
FGFR1-209ENST00000397113 JARID2Q92833 1246 aaPredicted RBP12.62□□□□□ -0.39
FGFR1-209ENST00000397113 LMTK3Q96Q04 1460 aa12.62□□□□□ -0.39
FGFR1-209ENST00000397113 GDPD2Q9HCC8 539 aa12.61□□□□□ -0.39
FGFR1-209ENST00000397113 WDR63Q8IWG1 891 aa12.61□□□□□ -0.39
FGFR1-209ENST00000397113 FAM135BQ49AJ0 1406 aa12.61□□□□□ -0.39
FGFR1-209ENST00000397113 N4BP2Q86UW6 1770 aaPredicted RBP12.61□□□□□ -0.39
FGFR1-209ENST00000397113 RAB3GAP1Q15042 981 aa12.6□□□□□ -0.39
FGFR1-209ENST00000397113 C16orf71Q8IYS4 520 aaPredicted RBP12.6□□□□□ -0.39
FGFR1-209ENST00000397113 ZGPATQ8N5A5 531 aaKnown RBP12.6□□□□□ -0.39
FGFR1-209ENST00000397113 SMARCA5O60264 1052 aaPredicted RBP12.59□□□□□ -0.39
FGFR1-209ENST00000397113 TMPOP42166 694 aaKnown RBP12.59□□□□□ -0.39
FGFR1-209ENST00000397113 RBSNQ9H1K0 784 aa12.59□□□□□ -0.39
FGFR1-209ENST00000397113 PTCH1Q13635 1447 aa12.59□□□□□ -0.39
FGFR1-209ENST00000397113 TRPM3Q9HCF6 1732 aaPredicted RBP12.59□□□□□ -0.39
FGFR1-209ENST00000397113 IGSF3O75054 1194 aa12.59□□□□□ -0.39
FGFR1-209ENST00000397113 ZSCAN23Q3MJ62 389 aa12.59□□□□□ -0.39
FGFR1-209ENST00000397113 ATAD2Q6PL18 1390 aa12.59□□□□□ -0.39
FGFR1-209ENST00000397113 SLC4A10Q6U841 1118 aa12.58□□□□□ -0.4
FGFR1-209ENST00000397113 CHMP3Q9Y3E7 222 aa12.58□□□□□ -0.4
FGFR1-209ENST00000397113 CD163L1Q9NR16 1453 aa12.58□□□□□ -0.4
FGFR1-209ENST00000397113 ABCC6O95255 1503 aa12.58□□□□□ -0.4
FGFR1-209ENST00000397113 MINK1Q8N4C8 1332 aaPredicted RBP12.58□□□□□ -0.4
FGFR1-209ENST00000397113 TSHZ3Q63HK5 1081 aa12.57□□□□□ -0.4
FGFR1-209ENST00000397113 CBX1P83916 185 aa12.57□□□□□ -0.4
FGFR1-209ENST00000397113 C17orf53Q8N3J3 647 aaPredicted RBP12.57□□□□□ -0.4
FGFR1-209ENST00000397113 SIRT1Q96EB6 747 aa12.57□□□□□ -0.4
FGFR1-209ENST00000397113 STRCP1A6NGW2 1772 aa12.57□□□□□ -0.4
FGFR1-209ENST00000397113 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.56□□□□□ -0.4
FGFR1-209ENST00000397113 SMC5Q8IY18 1101 aa12.56□□□□□ -0.4
FGFR1-209ENST00000397113 ZNF692Q9BU19 519 aaPredicted RBP12.56□□□□□ -0.4
FGFR1-209ENST00000397113 NINLQ9Y2I6 1382 aa12.56□□□□□ -0.4
FGFR1-209ENST00000397113 NUCB1Q02818 461 aa12.56□□□□□ -0.4
FGFR1-209ENST00000397113 NGEFQ8N5V2 710 aa12.56□□□□□ -0.4
FGFR1-209ENST00000397113 LARP6Q9BRS8 491 aaKnown RBP12.56□□□□□ -0.4
FGFR1-209ENST00000397113 CDC45O75419 566 aa12.56□□□□□ -0.4
FGFR1-209ENST00000397113 OFD1O75665 1012 aa12.56□□□□□ -0.4
FGFR1-209ENST00000397113 NEK4P51957 841 aa12.56□□□□□ -0.4
FGFR1-209ENST00000397113 CASC1Q6TDU7 716 aa12.56□□□□□ -0.4
FGFR1-209ENST00000397113 STRCQ7RTU9 1775 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms