RNA–Protein interactions for RNA: ENST00000396268.7

CCHCR1-203, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,958 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-203ENST00000396268 MFAP1P55081 439 aaKnown RBP17.74■□□□□ 0.43
CCHCR1-203ENST00000396268 ATP7BP35670 1465 aa17.74■□□□□ 0.43
CCHCR1-203ENST00000396268 SETD1BQ9UPS6 1966 aaKnown RBP17.73■□□□□ 0.43
CCHCR1-203ENST00000396268 TRIM27P14373 513 aa17.73■□□□□ 0.43
CCHCR1-203ENST00000396268 SSH1Q8WYL5 1049 aa17.73■□□□□ 0.43
CCHCR1-203ENST00000396268 TMPOP42166 694 aaKnown RBP17.72■□□□□ 0.43
CCHCR1-203ENST00000396268 ANTXR1Q9H6X2 564 aa17.72■□□□□ 0.43
CCHCR1-203ENST00000396268 CPSF1Q10570 1443 aaKnown RBP17.71■□□□□ 0.43
CCHCR1-203ENST00000396268 PLEKHG5O94827 1062 aa17.7■□□□□ 0.42
CCHCR1-203ENST00000396268 NSD2O96028 1365 aa17.7■□□□□ 0.42
CCHCR1-203ENST00000396268 ZNF142P52746 1687 aaPredicted RBP17.7■□□□□ 0.42
CCHCR1-203ENST00000396268 C22orf23Q9BZE7 217 aa17.7■□□□□ 0.42
CCHCR1-203ENST00000396268 NOB1Q9ULX3 412 aaKnown RBP17.7■□□□□ 0.42
CCHCR1-203ENST00000396268 DDX19BQ9UMR2 479 aa17.7■□□□□ 0.42
CCHCR1-203ENST00000396268 ATF7IPQ6VMQ6 1270 aa17.69■□□□□ 0.42
CCHCR1-203ENST00000396268 ACEP12821 1306 aa17.69■□□□□ 0.42
CCHCR1-203ENST00000396268 CT47B1P0C2W7 299 aaPredicted RBP17.69■□□□□ 0.42
CCHCR1-203ENST00000396268 RIPK4P57078 832 aa17.69■□□□□ 0.42
CCHCR1-203ENST00000396268 TRIM35Q9UPQ4 493 aa17.69■□□□□ 0.42
CCHCR1-203ENST00000396268 XRCC6P12956 609 aaKnown RBP eCLIP17.68■□□□□ 0.42
CCHCR1-203ENST00000396268 XRN1Q8IZH2 1706 aaKnown RBP17.68■□□□□ 0.42
CCHCR1-203ENST00000396268 VSIG10Q8N0Z9 540 aa17.67■□□□□ 0.42
CCHCR1-203ENST00000396268 PLEKHF1Q96S99 279 aa17.67■□□□□ 0.42
CCHCR1-203ENST00000396268 RGPD8O14715 1765 aaPredicted RBP17.67■□□□□ 0.42
CCHCR1-203ENST00000396268 PTCH1Q13635 1447 aa17.67■□□□□ 0.42
CCHCR1-203ENST00000396268 HSPA2P54652 639 aa17.67■□□□□ 0.42
CCHCR1-203ENST00000396268 TMEM57Q8N5G2 664 aa17.67■□□□□ 0.42
CCHCR1-203ENST00000396268 NCBP3Q53F19 620 aaKnown RBP17.66■□□□□ 0.42
CCHCR1-203ENST00000396268 KIF20BQ96Q89 1820 aa17.66■□□□□ 0.42
CCHCR1-203ENST00000396268 CDC42BPGQ6DT37 1551 aa17.66■□□□□ 0.42
CCHCR1-203ENST00000396268 ADGRB2O60241 1585 aa17.65■□□□□ 0.42
CCHCR1-203ENST00000396268 DIP2AQ14689 1571 aa17.65■□□□□ 0.42
CCHCR1-203ENST00000396268 GOLGA6L3A6NEY3 463 aa17.65■□□□□ 0.42
CCHCR1-203ENST00000396268 HDAC1Q13547 482 aaPredicted RBP17.65■□□□□ 0.42
CCHCR1-203ENST00000396268 L1TD1Q5T7N2 865 aaKnown RBP17.65■□□□□ 0.42
CCHCR1-203ENST00000396268 PNNQ9H307 717 aaKnown RBP17.65■□□□□ 0.42
CCHCR1-203ENST00000396268 EMILIN1Q9Y6C2 1016 aa17.65■□□□□ 0.42
CCHCR1-203ENST00000396268 EDC4Q6P2E9 1401 aaKnown RBP17.64■□□□□ 0.41
CCHCR1-203ENST00000396268 SOX12O15370 315 aa17.64■□□□□ 0.41
CCHCR1-203ENST00000396268 RRS1Q15050 365 aaKnown RBP17.64■□□□□ 0.41
CCHCR1-203ENST00000396268 DIAPH1O60610 1272 aaKnown RBP17.64■□□□□ 0.41
CCHCR1-203ENST00000396268 POLKQ9UBT6 870 aa17.64■□□□□ 0.41
CCHCR1-203ENST00000396268 NPHP4O75161 1426 aaPredicted RBP17.63■□□□□ 0.41
CCHCR1-203ENST00000396268 ANKRD26Q9UPS8 1709 aa17.63■□□□□ 0.41
CCHCR1-203ENST00000396268 IPO8O15397 1037 aaKnown RBP17.62■□□□□ 0.41
CCHCR1-203ENST00000396268 LNPKQ9C0E8 428 aa17.62■□□□□ 0.41
CCHCR1-203ENST00000396268 CHD2O14647 1828 aaKnown RBP17.61■□□□□ 0.41
CCHCR1-203ENST00000396268 MCM4P33991 863 aa17.61■□□□□ 0.41
CCHCR1-203ENST00000396268 HSCBQ8IWL3 235 aa17.61■□□□□ 0.41
CCHCR1-203ENST00000396268 PLEKHG3A1L390 1219 aa17.61■□□□□ 0.41
CCHCR1-203ENST00000396268 SMC5Q8IY18 1101 aa17.61■□□□□ 0.41
CCHCR1-203ENST00000396268 MON2Q7Z3U7 1717 aa17.61■□□□□ 0.41
CCHCR1-203ENST00000396268 TOPAZ1Q8N9V7 1692 aa17.61■□□□□ 0.41
CCHCR1-203ENST00000396268 AKAP12Q02952 1782 aa17.61■□□□□ 0.41
CCHCR1-203ENST00000396268 KDM4FA0A1W2PPD8 638 aa17.61■□□□□ 0.41
CCHCR1-203ENST00000396268 PKNOX2Q96KN3 472 aa17.61■□□□□ 0.41
CCHCR1-203ENST00000396268 ZBTB40Q9NUA8 1239 aa17.61■□□□□ 0.41
CCHCR1-203ENST00000396268 CHMP5Q9NZZ3 219 aa17.61■□□□□ 0.41
CCHCR1-203ENST00000396268 TTC21BQ7Z4L5 1316 aa17.61■□□□□ 0.41
CCHCR1-203ENST00000396268 KIF16BQ96L93 1317 aa17.61■□□□□ 0.41
CCHCR1-203ENST00000396268 ITSN1Q15811 1721 aa17.6■□□□□ 0.41
CCHCR1-203ENST00000396268 COL3A1P02461 1466 aaPredicted RBP17.6■□□□□ 0.41
CCHCR1-203ENST00000396268 NGDNQ8NEJ9 315 aaKnown RBP17.59■□□□□ 0.41
CCHCR1-203ENST00000396268 NUTM2GQ5VZR2 741 aa17.59■□□□□ 0.41
CCHCR1-203ENST00000396268 COG3Q96JB2 828 aa17.59■□□□□ 0.41
CCHCR1-203ENST00000396268 MAP2P11137 1827 aaKnown RBP17.59■□□□□ 0.41
CCHCR1-203ENST00000396268 PIK3R4Q99570 1358 aa17.59■□□□□ 0.41
CCHCR1-203ENST00000396268 IL16Q14005 1332 aa17.58■□□□□ 0.41
CCHCR1-203ENST00000396268 ZNF692Q9BU19 519 aaPredicted RBP17.58■□□□□ 0.4
CCHCR1-203ENST00000396268 USP6P35125 1406 aa17.58■□□□□ 0.4
CCHCR1-203ENST00000396268 NALCNQ8IZF0 1738 aa17.57■□□□□ 0.4
CCHCR1-203ENST00000396268 PRKAR2BP31323 418 aa17.57■□□□□ 0.4
CCHCR1-203ENST00000396268 C14orf37Q86TY3 774 aa17.57■□□□□ 0.4
CCHCR1-203ENST00000396268 HSP90AA2PQ14568 343 aaPredicted RBP17.56■□□□□ 0.4
CCHCR1-203ENST00000396268 ELL2O00472 640 aaPredicted RBP17.55■□□□□ 0.4
CCHCR1-203ENST00000396268 TRAK2O60296 914 aa17.55■□□□□ 0.4
CCHCR1-203ENST00000396268 THUMPD2Q9BTF0 503 aaKnown RBP17.55■□□□□ 0.4
CCHCR1-203ENST00000396268 C1orf115Q9H7X2 142 aa17.55■□□□□ 0.4
CCHCR1-203ENST00000396268 HSP90AA1P07900 732 aaKnown RBP17.55■□□□□ 0.4
CCHCR1-203ENST00000396268 HMOX1P09601 288 aa17.55■□□□□ 0.4
CCHCR1-203ENST00000396268 NUCB1Q02818 461 aa17.55■□□□□ 0.4
CCHCR1-203ENST00000396268 CHD1LQ86WJ1 897 aa17.55■□□□□ 0.4
CCHCR1-203ENST00000396268 FOXD4L1Q9NU39 408 aa17.55■□□□□ 0.4
CCHCR1-203ENST00000396268 ANKRD45Q5TZF3 282 aa17.55■□□□□ 0.4
CCHCR1-203ENST00000396268 ZMYND15Q9H091 742 aa17.55■□□□□ 0.4
CCHCR1-203ENST00000396268 NRKQ7Z2Y5 1582 aa17.54■□□□□ 0.4
CCHCR1-203ENST00000396268 PNPLA6Q8IY17 1366 aa17.54■□□□□ 0.4
CCHCR1-203ENST00000396268 FCHSD2O94868 740 aa17.53■□□□□ 0.4
CCHCR1-203ENST00000396268 ALDH1L2Q3SY69 923 aa17.53■□□□□ 0.4
CCHCR1-203ENST00000396268 SSH2Q76I76 1423 aa17.52■□□□□ 0.4
CCHCR1-203ENST00000396268 XPCQ01831 940 aaPredicted RBP17.52■□□□□ 0.4
CCHCR1-203ENST00000396268 HSP90AB1P08238 724 aaKnown RBP17.52■□□□□ 0.39
CCHCR1-203ENST00000396268 GLIPR1L2Q4G1C9 344 aa17.51■□□□□ 0.39
CCHCR1-203ENST00000396268 ORAI2Q96SN7 254 aa17.51■□□□□ 0.39
CCHCR1-203ENST00000396268 FMN2Q9NZ56 1722 aa17.51■□□□□ 0.39
CCHCR1-203ENST00000396268 ESCO1Q5FWF5 840 aa17.51■□□□□ 0.39
CCHCR1-203ENST00000396268 PROSER2Q86WR7 435 aaPredicted RBP17.51■□□□□ 0.39
CCHCR1-203ENST00000396268 PHACTR3Q96KR7 559 aa17.51■□□□□ 0.39
CCHCR1-203ENST00000396268 OVOS2A0A0J9YW53 1432 aa17.49■□□□□ 0.39
CCHCR1-203ENST00000396268 OVOS2Q6IE36 1432 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms