RNA–Protein interactions for RNA: ENST00000395792.6

AFP-202, Transcript of alpha fetoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AFP, Length 2,484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-202ENST00000395792 SUPT16HQ9Y5B9 1047 aaKnown RBP8.07□□□□□ -1.12
AFP-202ENST00000395792 COL3A1P02461 1466 aaPredicted RBP8.07□□□□□ -1.12
AFP-202ENST00000395792 NKTRP30414 1462 aaKnown RBP8.07□□□□□ -1.12
AFP-202ENST00000395792 NALCNQ8IZF0 1738 aa8.07□□□□□ -1.12
AFP-202ENST00000395792 CNGB1Q14028 1251 aaPredicted RBP8.07□□□□□ -1.12
AFP-202ENST00000395792 RUNDC1Q96C34 613 aa8.07□□□□□ -1.12
AFP-202ENST00000395792 KCNA6P17658 529 aa8.06□□□□□ -1.12
AFP-202ENST00000395792 MTHFSP49914 203 aa8.06□□□□□ -1.12
AFP-202ENST00000395792 LMOD2Q6P5Q4 547 aa8.06□□□□□ -1.12
AFP-202ENST00000395792 SLC26A8Q96RN1 970 aa8.06□□□□□ -1.12
AFP-202ENST00000395792 ANO8Q9HCE9 1232 aaPredicted RBP8.06□□□□□ -1.12
AFP-202ENST00000395792 ZNF521Q96K83 1311 aa8.06□□□□□ -1.12
AFP-202ENST00000395792 CDK12Q9NYV4 1490 aaPredicted RBP8.06□□□□□ -1.12
AFP-202ENST00000395792 USP31Q70CQ4 1352 aa8.06□□□□□ -1.12
AFP-202ENST00000395792 USP6P35125 1406 aa8.06□□□□□ -1.12
AFP-202ENST00000395792 SSH2Q76I76 1423 aa8.06□□□□□ -1.12
AFP-202ENST00000395792 KIF24Q5T7B8 1368 aa8.05□□□□□ -1.12
AFP-202ENST00000395792 NCLP19338 710 aaKnown RBP8.05□□□□□ -1.12
AFP-202ENST00000395792 ADGRL3Q9HAR2 1447 aa8.05□□□□□ -1.12
AFP-202ENST00000395792 MAP2P11137 1827 aaKnown RBP8.05□□□□□ -1.12
AFP-202ENST00000395792 COG3Q96JB2 828 aa8.05□□□□□ -1.12
AFP-202ENST00000395792 PRR36Q9H6K5 1346 aa8.05□□□□□ -1.12
AFP-202ENST00000395792 IQSEC2Q5JU85 1478 aa8.04□□□□□ -1.12
AFP-202ENST00000395792 GOLGA2Q08379 1002 aa8.04□□□□□ -1.12
AFP-202ENST00000395792 WDR63Q8IWG1 891 aa8.04□□□□□ -1.12
AFP-202ENST00000395792 TRAIPQ9BWF2 469 aa8.04□□□□□ -1.12
AFP-202ENST00000395792 TRMT2AQ8IZ69 625 aaKnown RBP8.04□□□□□ -1.12
AFP-202ENST00000395792 PRDM16Q9HAZ2 1276 aa8.04□□□□□ -1.12
AFP-202ENST00000395792 TTC21BQ7Z4L5 1316 aa8.04□□□□□ -1.12
AFP-202ENST00000395792 OVOS2A0A0J9YW53 1432 aa8.03□□□□□ -1.12
AFP-202ENST00000395792 OVOS2Q6IE36 1432 aa8.03□□□□□ -1.12
AFP-202ENST00000395792 ZNF526Q8TF50 670 aaPredicted RBP8.03□□□□□ -1.12
AFP-202ENST00000395792 KIF1AQ12756 1690 aa8.03□□□□□ -1.12
AFP-202ENST00000395792 ACEP12821 1306 aa8.03□□□□□ -1.12
AFP-202ENST00000395792 DIAPH1O60610 1272 aaKnown RBP8.03□□□□□ -1.12
AFP-202ENST00000395792 GGNBP2Q9H3C7 697 aa8.03□□□□□ -1.12
AFP-202ENST00000395792 DCCP43146 1447 aa8.02□□□□□ -1.12
AFP-202ENST00000395792 FCHSD2O94868 740 aa8.02□□□□□ -1.13
AFP-202ENST00000395792 GZF1Q9H116 711 aaPredicted RBP8.02□□□□□ -1.13
AFP-202ENST00000395792 SLFN5Q08AF3 891 aa8.02□□□□□ -1.13
AFP-202ENST00000395792 IL16Q14005 1332 aa8.02□□□□□ -1.13
AFP-202ENST00000395792 RGPD8O14715 1765 aaPredicted RBP8.01□□□□□ -1.13
AFP-202ENST00000395792 CT47B1P0C2W7 299 aaPredicted RBP8.01□□□□□ -1.13
AFP-202ENST00000395792 PPP4R2Q9NY27 417 aa8.01□□□□□ -1.13
AFP-202ENST00000395792 RCAN3Q9UKA8 241 aa8.01□□□□□ -1.13
AFP-202ENST00000395792 NEFMP07197 916 aa8.01□□□□□ -1.13
AFP-202ENST00000395792 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.01□□□□□ -1.13
AFP-202ENST00000395792 POLKQ9UBT6 870 aa8.01□□□□□ -1.13
AFP-202ENST00000395792 MST1RQ04912 1400 aa8□□□□□ -1.13
AFP-202ENST00000395792 TEX2Q8IWB9 1127 aa8□□□□□ -1.13
AFP-202ENST00000395792 APAF1O14727 1248 aa8□□□□□ -1.13
AFP-202ENST00000395792 RGL2O15211 777 aa8□□□□□ -1.13
AFP-202ENST00000395792 CALD1Q05682 793 aaKnown RBP8□□□□□ -1.13
AFP-202ENST00000395792 CCDC82Q8N4S0 544 aa8□□□□□ -1.13
AFP-202ENST00000395792 U2AF1L5P0DN76 240 aaPredicted RBP7.99□□□□□ -1.13
AFP-202ENST00000395792 U2AF1Q01081 240 aaKnown RBP eCLIP7.99□□□□□ -1.132e-11■■□□□ 13.6
AFP-202ENST00000395792 DUSP27Q5VZP5 1158 aa7.99□□□□□ -1.13
AFP-202ENST00000395792 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.99□□□□□ -1.13
AFP-202ENST00000395792 NGDNQ8NEJ9 315 aaKnown RBP7.99□□□□□ -1.13
AFP-202ENST00000395792 PLEKHF1Q96S99 279 aa7.99□□□□□ -1.13
AFP-202ENST00000395792 PHRF1Q9P1Y6 1649 aaKnown RBP7.99□□□□□ -1.13
AFP-202ENST00000395792 MAPK8IP3Q9UPT6 1336 aa7.99□□□□□ -1.13
AFP-202ENST00000395792 WWC1Q8IX03 1113 aa7.98□□□□□ -1.13
AFP-202ENST00000395792 PIK3C2AO00443 1686 aa7.98□□□□□ -1.13
AFP-202ENST00000395792 TNNT2P45379 298 aaPredicted RBP7.98□□□□□ -1.13
AFP-202ENST00000395792 RRP1P56182 461 aaKnown RBP7.98□□□□□ -1.13
AFP-202ENST00000395792 NME9Q86XW9 330 aa7.98□□□□□ -1.13
AFP-202ENST00000395792 TCP11L2Q8N4U5 519 aa7.98□□□□□ -1.13
AFP-202ENST00000395792 MYH16Q9H6N6 1097 aa7.98□□□□□ -1.13
AFP-202ENST00000395792 SLC24A3Q9HC58 644 aa7.98□□□□□ -1.13
AFP-202ENST00000395792 RTL1A6NKG5 1358 aa7.98□□□□□ -1.13
AFP-202ENST00000395792 IL13P35225 146 aa7.97□□□□□ -1.13
AFP-202ENST00000395792 LMOD3Q0VAK6 560 aa7.97□□□□□ -1.13
AFP-202ENST00000395792 PLCD4Q9BRC7 762 aa7.97□□□□□ -1.13
AFP-202ENST00000395792 PHF8Q9UPP1 1060 aa7.97□□□□□ -1.13
AFP-202ENST00000395792 RGPD1P0DJD0 1748 aa7.97□□□□□ -1.13
AFP-202ENST00000395792 SBNO1A3KN83 1393 aa7.97□□□□□ -1.13
AFP-202ENST00000395792 NCKAP5LQ9HCH0 1330 aa7.97□□□□□ -1.13
AFP-202ENST00000395792 C19orf44Q9H6X5 657 aa7.97□□□□□ -1.13
AFP-202ENST00000395792 MARF1Q9Y4F3 1742 aaKnown RBP7.97□□□□□ -1.13
AFP-202ENST00000395792 PRDM10Q9NQV6 1147 aa7.96□□□□□ -1.13
AFP-202ENST00000395792 ARHGEF10O15013 1369 aa7.96□□□□□ -1.13
AFP-202ENST00000395792 CCDC125Q86Z20 511 aa7.96□□□□□ -1.14
AFP-202ENST00000395792 CCDC146Q8IYE0 955 aa7.96□□□□□ -1.14
AFP-202ENST00000395792 RNF216Q9NWF9 866 aaPredicted RBP7.96□□□□□ -1.14
AFP-202ENST00000395792 KDM4AO75164 1064 aa7.95□□□□□ -1.14
AFP-202ENST00000395792 TMPOP42166 694 aaKnown RBP7.95□□□□□ -1.14
AFP-202ENST00000395792 SETQ01105 290 aaPredicted RBP7.95□□□□□ -1.14
AFP-202ENST00000395792 KCNH5Q8NCM2 988 aa7.95□□□□□ -1.14
AFP-202ENST00000395792 FLT4P35916 1363 aa7.95□□□□□ -1.14
AFP-202ENST00000395792 U2SURPO15042 1029 aaKnown RBP7.95□□□□□ -1.14
AFP-202ENST00000395792 PROSER2Q86WR7 435 aaPredicted RBP7.95□□□□□ -1.14
AFP-202ENST00000395792 CDCA7LQ96GN5 454 aa7.95□□□□□ -1.14
AFP-202ENST00000395792 LMTK3Q96Q04 1460 aa7.94□□□□□ -1.14
AFP-202ENST00000395792 SLIT3O75094 1523 aa7.94□□□□□ -1.14
AFP-202ENST00000395792 ABCC6O95255 1503 aa7.94□□□□□ -1.14
AFP-202ENST00000395792 PLEKHG2Q9H7P9 1386 aa7.94□□□□□ -1.14
AFP-202ENST00000395792 TRPM3Q9HCF6 1732 aaPredicted RBP7.94□□□□□ -1.14
AFP-202ENST00000395792 MS4A1P11836 297 aa7.94□□□□□ -1.14
AFP-202ENST00000395792 PSME1Q06323 249 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms