RNA–Protein interactions for RNA: ENST00000395422.3

CHCHD2-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD2, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2-201ENST00000395422 SLIT3O75094 1523 aa19.68■□□□□ 0.74
CHCHD2-201ENST00000395422 NLRP6P59044 892 aa19.68■□□□□ 0.74
CHCHD2-201ENST00000395422 ZNF784Q8NCA9 323 aaPredicted RBP19.68■□□□□ 0.74
CHCHD2-201ENST00000395422 USP6P35125 1406 aa19.68■□□□□ 0.74
CHCHD2-201ENST00000395422 CABP1Q9NZU7 370 aa19.67■□□□□ 0.74
CHCHD2-201ENST00000395422 ATF5Q9Y2D1 282 aaPredicted RBP19.67■□□□□ 0.74
CHCHD2-201ENST00000395422 WDR17Q8IZU2 1322 aa19.66■□□□□ 0.74
CHCHD2-201ENST00000395422 BRD4O60885 1362 aaPredicted RBP19.66■□□□□ 0.74
CHCHD2-201ENST00000395422 BCL9O00512 1426 aa19.66■□□□□ 0.74
CHCHD2-201ENST00000395422 MYOM1P52179 1685 aa19.65■□□□□ 0.74
CHCHD2-201ENST00000395422 CENPJQ9HC77 1338 aaPredicted RBP19.65■□□□□ 0.74
CHCHD2-201ENST00000395422 SBF2Q86WG5 1849 aa19.65■□□□□ 0.74
CHCHD2-201ENST00000395422 TXNRD1Q16881 649 aa19.64■□□□□ 0.73
CHCHD2-201ENST00000395422 SYT17Q9BSW7 474 aa19.63■□□□□ 0.73
CHCHD2-201ENST00000395422 FHDC1Q9C0D6 1143 aaPredicted RBP19.63■□□□□ 0.73
CHCHD2-201ENST00000395422 COL18A1P39060 1754 aa19.62■□□□□ 0.73
CHCHD2-201ENST00000395422 SLC15A2Q16348 729 aa19.62■□□□□ 0.73
CHCHD2-201ENST00000395422 SGIP1Q9BQI5 828 aa19.62■□□□□ 0.73
CHCHD2-201ENST00000395422 CPSF1Q10570 1443 aaKnown RBP19.61■□□□□ 0.73
CHCHD2-201ENST00000395422 ARHGEF25Q86VW2 580 aa19.61■□□□□ 0.73
CHCHD2-201ENST00000395422 STK32BQ9NY57 414 aa19.61■□□□□ 0.73
CHCHD2-201ENST00000395422 KIAA1210Q9ULL0 1709 aa19.6■□□□□ 0.73
CHCHD2-201ENST00000395422 CDCA7Q9BWT1 371 aaPredicted RBP19.6■□□□□ 0.73
CHCHD2-201ENST00000395422 PIK3C2AO00443 1686 aa19.59■□□□□ 0.73
CHCHD2-201ENST00000395422 CARD10Q9BWT7 1032 aa19.59■□□□□ 0.73
CHCHD2-201ENST00000395422 SOX12O15370 315 aa19.58■□□□□ 0.72
CHCHD2-201ENST00000395422 MTFR1LQ9H019 292 aa19.58■□□□□ 0.72
CHCHD2-201ENST00000395422 WNK3Q9BYP7 1800 aa19.57■□□□□ 0.72
CHCHD2-201ENST00000395422 EXOC5O00471 708 aa19.56■□□□□ 0.72
CHCHD2-201ENST00000395422 CSB-PGBD3P0DP91 1061 aa19.56■□□□□ 0.72
CHCHD2-201ENST00000395422 TTC21BQ7Z4L5 1316 aa19.55■□□□□ 0.72
CHCHD2-201ENST00000395422 TNS2Q63HR2 1409 aa19.53■□□□□ 0.72
CHCHD2-201ENST00000395422 SENP3-EIF4A1A0A087X0R7 540 aa19.53■□□□□ 0.72
CHCHD2-201ENST00000395422 KCNH5Q8NCM2 988 aa19.53■□□□□ 0.72
CHCHD2-201ENST00000395422 ACSBG1Q96GR2 724 aa19.53■□□□□ 0.72
CHCHD2-201ENST00000395422 QRICH2Q9H0J4 1663 aa19.52■□□□□ 0.72
CHCHD2-201ENST00000395422 C1QTNF8P60827 252 aa19.52■□□□□ 0.72
CHCHD2-201ENST00000395422 ARXQ96QS3 562 aa19.52■□□□□ 0.72
CHCHD2-201ENST00000395422 NFAT5O94916 1531 aa19.51■□□□□ 0.71
CHCHD2-201ENST00000395422 ZNF827Q17R98 1081 aa19.51■□□□□ 0.71
CHCHD2-201ENST00000395422 CCDC7Q96M83 1385 aa19.51■□□□□ 0.71
CHCHD2-201ENST00000395422 AKAP12Q02952 1782 aa19.51■□□□□ 0.71
CHCHD2-201ENST00000395422 GOLGB1Q14789 3259 aaKnown RBP19.5■□□□□ 0.71
CHCHD2-201ENST00000395422 TRPM1Q7Z4N2 1603 aa19.5■□□□□ 0.71
CHCHD2-201ENST00000395422 EVC2Q86UK5 1308 aa19.5■□□□□ 0.71
CHCHD2-201ENST00000395422 MAP3K5Q99683 1374 aa19.49■□□□□ 0.71
CHCHD2-201ENST00000395422 PAPPAQ13219 1627 aa19.49■□□□□ 0.71
CHCHD2-201ENST00000395422 ZNF692Q9BU19 519 aaPredicted RBP19.48■□□□□ 0.71
CHCHD2-201ENST00000395422 LRRC4BQ9NT99 713 aa19.48■□□□□ 0.71
CHCHD2-201ENST00000395422 TTC21AQ8NDW8 1320 aa19.48■□□□□ 0.71
CHCHD2-201ENST00000395422 RGPD5Q99666 1765 aa19.47■□□□□ 0.71
CHCHD2-201ENST00000395422 NHSQ6T4R5 1651 aa19.47■□□□□ 0.71
CHCHD2-201ENST00000395422 ERBB3P21860 1342 aa19.46■□□□□ 0.71
CHCHD2-201ENST00000395422 ABCC6O95255 1503 aa19.46■□□□□ 0.71
CHCHD2-201ENST00000395422 L3MBTL2Q969R5 705 aa19.43■□□□□ 0.7
CHCHD2-201ENST00000395422 NLRP2Q9NX02 1062 aa19.43■□□□□ 0.7
CHCHD2-201ENST00000395422 KTN1Q86UP2 1357 aaKnown RBP19.43■□□□□ 0.7
CHCHD2-201ENST00000395422 IL2RBP14784 551 aa19.42■□□□□ 0.7
CHCHD2-201ENST00000395422 GPR162Q16538 588 aa19.42■□□□□ 0.7
CHCHD2-201ENST00000395422 AKT1S1Q96B36 256 aa19.42■□□□□ 0.7
CHCHD2-201ENST00000395422 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.41■□□□□ 0.7
CHCHD2-201ENST00000395422 USP31Q70CQ4 1352 aa19.4■□□□□ 0.7
CHCHD2-201ENST00000395422 NME9Q86XW9 330 aa19.39■□□□□ 0.69
CHCHD2-201ENST00000395422 KLHL34Q8N239 644 aa19.39■□□□□ 0.69
CHCHD2-201ENST00000395422 ANKRD24Q8TF21 1146 aa19.39■□□□□ 0.69
CHCHD2-201ENST00000395422 PNPLA7Q6ZV29 1317 aa19.39■□□□□ 0.69
CHCHD2-201ENST00000395422 CHD4Q14839 1912 aa19.38■□□□□ 0.69
CHCHD2-201ENST00000395422 NLGN2Q8NFZ4 835 aa19.38■□□□□ 0.69
CHCHD2-201ENST00000395422 CEP350Q5VT06 3117 aa19.38■□□□□ 0.69
CHCHD2-201ENST00000395422 BTAF1O14981 1849 aa19.37■□□□□ 0.69
CHCHD2-201ENST00000395422 SBNO2Q9Y2G9 1366 aa19.37■□□□□ 0.69
CHCHD2-201ENST00000395422 GIGYF1O75420 1035 aaPredicted RBP19.37■□□□□ 0.69
CHCHD2-201ENST00000395422 KCNQ4P56696 695 aa19.37■□□□□ 0.69
CHCHD2-201ENST00000395422 CD163L1Q9NR16 1453 aa19.36■□□□□ 0.69
CHCHD2-201ENST00000395422 ROCK2O75116 1388 aaKnown RBP19.36■□□□□ 0.69
CHCHD2-201ENST00000395422 PELP1Q8IZL8 1130 aaKnown RBP19.36■□□□□ 0.69
CHCHD2-201ENST00000395422 SLC16A10Q8TF71 515 aa19.36■□□□□ 0.69
CHCHD2-201ENST00000395422 POLD1P28340 1107 aa19.34■□□□□ 0.69
CHCHD2-201ENST00000395422 SLC27A3Q5K4L6 730 aa19.34■□□□□ 0.69
CHCHD2-201ENST00000395422 IFFO2Q5TF58 517 aa19.33■□□□□ 0.68
CHCHD2-201ENST00000395422 DDX54Q8TDD1 881 aaKnown RBP19.33■□□□□ 0.68
CHCHD2-201ENST00000395422 MON2Q7Z3U7 1717 aa19.32■□□□□ 0.68
CHCHD2-201ENST00000395422 SIN3AQ96ST3 1273 aa19.32■□□□□ 0.68
CHCHD2-201ENST00000395422 SHANK3Q9BYB0 1731 aa19.31■□□□□ 0.68
CHCHD2-201ENST00000395422 USP54Q70EL1 1684 aa19.31■□□□□ 0.68
CHCHD2-201ENST00000395422 YBX3P16989 372 aaKnown RBP eCLIP19.31■□□□□ 0.684e-18■□□□□ 9.6
CHCHD2-201ENST00000395422 TFCP2L1Q9NZI6 479 aa19.31■□□□□ 0.68
CHCHD2-201ENST00000395422 NSD2O96028 1365 aa19.3■□□□□ 0.68
CHCHD2-201ENST00000395422 COL24A1Q17RW2 1714 aa19.29■□□□□ 0.68
CHCHD2-201ENST00000395422 PRIM1P49642 420 aaKnown RBP19.29■□□□□ 0.68
CHCHD2-201ENST00000395422 SYTL4Q96C24 671 aaPredicted RBP19.29■□□□□ 0.68
CHCHD2-201ENST00000395422 LTV1Q96GA3 475 aaPredicted RBP19.28■□□□□ 0.68
CHCHD2-201ENST00000395422 SLC12A5Q9H2X9 1139 aa19.28■□□□□ 0.68
CHCHD2-201ENST00000395422 TMC1Q8TDI8 760 aa19.27■□□□□ 0.68
CHCHD2-201ENST00000395422 IP6K1Q92551 441 aa19.27■□□□□ 0.68
CHCHD2-201ENST00000395422 ANKRD36BQ8N2N9 1353 aa19.27■□□□□ 0.68
CHCHD2-201ENST00000395422 LTN1O94822 1766 aa19.27■□□□□ 0.67
CHCHD2-201ENST00000395422 QSER1Q2KHR3 1735 aa19.26■□□□□ 0.67
CHCHD2-201ENST00000395422 EDC4Q6P2E9 1401 aaKnown RBP19.25■□□□□ 0.67
CHCHD2-201ENST00000395422 A0A1W2PP64 1363 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms