RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 SSH2Q76I76 1423 aa11.54□□□□□ -0.56
HERC4-203ENST00000395185 USP32Q8NFA0 1604 aa11.54□□□□□ -0.56
HERC4-203ENST00000395185 CCER2I3L3R5 266 aa11.54□□□□□ -0.56
HERC4-203ENST00000395185 SOX12O15370 315 aa11.54□□□□□ -0.56
HERC4-203ENST00000395185 ANP32CO43423 234 aa11.54□□□□□ -0.56
HERC4-203ENST00000395185 RALBP1Q15311 655 aa11.54□□□□□ -0.56
HERC4-203ENST00000395185 USP19O94966 1318 aa11.54□□□□□ -0.56
HERC4-203ENST00000395185 PARD3Q8TEW0 1356 aa11.54□□□□□ -0.56
HERC4-203ENST00000395185 ATRNO75882 1429 aa11.53□□□□□ -0.56
HERC4-203ENST00000395185 SEPT12Q8IYM1 358 aa11.53□□□□□ -0.56
HERC4-203ENST00000395185 COG3Q96JB2 828 aa11.53□□□□□ -0.56
HERC4-203ENST00000395185 COL22A1Q8NFW1 1626 aaPredicted RBP11.53□□□□□ -0.56
HERC4-203ENST00000395185 CDK12Q9NYV4 1490 aaPredicted RBP11.52□□□□□ -0.56
HERC4-203ENST00000395185 SLIT2O94813 1529 aa11.52□□□□□ -0.57
HERC4-203ENST00000395185 FYB1O15117 783 aa11.52□□□□□ -0.57
HERC4-203ENST00000395185 ONECUT3O60422 494 aaPredicted RBP11.52□□□□□ -0.57
HERC4-203ENST00000395185 NME9Q86XW9 330 aa11.52□□□□□ -0.57
HERC4-203ENST00000395185 CPDO75976 1380 aa11.52□□□□□ -0.57
HERC4-203ENST00000395185 CSB-PGBD3P0DP91 1061 aa11.51□□□□□ -0.57
HERC4-203ENST00000395185 FAM98CQ17RN3 349 aaKnown RBP11.51□□□□□ -0.57
HERC4-203ENST00000395185 ARHGEF25Q86VW2 580 aa11.51□□□□□ -0.57
HERC4-203ENST00000395185 CCDC125Q86Z20 511 aa11.51□□□□□ -0.57
HERC4-203ENST00000395185 NSD3Q9BZ95 1437 aa11.51□□□□□ -0.57
HERC4-203ENST00000395185 KRT27Q7Z3Y8 459 aa11.5□□□□□ -0.57
HERC4-203ENST00000395185 UPF1Q92900 1129 aaKnown RBP eCLIP11.5□□□□□ -0.57
HERC4-203ENST00000395185 USP35Q9P2H5 1018 aa11.5□□□□□ -0.57
HERC4-203ENST00000395185 THRAP3Q9Y2W1 955 aaKnown RBP11.5□□□□□ -0.57
HERC4-203ENST00000395185 CGNL1Q0VF96 1302 aa11.5□□□□□ -0.57
HERC4-203ENST00000395185 SPATA31A5Q5VU36 1347 aa11.5□□□□□ -0.57
HERC4-203ENST00000395185 SPATA31A7Q8IWB4 1347 aa11.5□□□□□ -0.57
HERC4-203ENST00000395185 NSD2O96028 1365 aa11.5□□□□□ -0.57
HERC4-203ENST00000395185 RGPD8O14715 1765 aaPredicted RBP11.49□□□□□ -0.57
HERC4-203ENST00000395185 TOM1L2Q6ZVM7 507 aa11.49□□□□□ -0.57
HERC4-203ENST00000395185 TCP11L2Q8N4U5 519 aa11.49□□□□□ -0.57
HERC4-203ENST00000395185 ZRANB1Q9UGI0 708 aa11.49□□□□□ -0.57
HERC4-203ENST00000395185 AATKQ6ZMQ8 1374 aa11.49□□□□□ -0.57
HERC4-203ENST00000395185 USP31Q70CQ4 1352 aa11.49□□□□□ -0.57
HERC4-203ENST00000395185 EDC4Q6P2E9 1401 aaKnown RBP11.49□□□□□ -0.57
HERC4-203ENST00000395185 TOPAZ1Q8N9V7 1692 aa11.49□□□□□ -0.57
HERC4-203ENST00000395185 ITSN1Q15811 1721 aa11.49□□□□□ -0.57
HERC4-203ENST00000395185 PDE3BQ13370 1112 aa11.48□□□□□ -0.57
HERC4-203ENST00000395185 SF3B2Q13435 895 aaKnown RBP11.48□□□□□ -0.57
HERC4-203ENST00000395185 LARP1Q6PKG0 1096 aaKnown RBP11.48□□□□□ -0.57
HERC4-203ENST00000395185 SSUH2Q9Y2M2 353 aa11.48□□□□□ -0.57
HERC4-203ENST00000395185 SPATA31A1Q5TZJ5 1347 aa11.48□□□□□ -0.57
HERC4-203ENST00000395185 AMPHP49418 695 aa11.47□□□□□ -0.57
HERC4-203ENST00000395185 CC2D1BQ5T0F9 858 aaKnown RBP11.47□□□□□ -0.57
HERC4-203ENST00000395185 BARGINQ6ZT62 677 aa11.47□□□□□ -0.57
HERC4-203ENST00000395185 REM2Q8IYK8 340 aaPredicted RBP11.47□□□□□ -0.57
HERC4-203ENST00000395185 MYBBP1AQ9BQG0 1328 aaKnown RBP11.46□□□□□ -0.57
HERC4-203ENST00000395185 CCDC184Q52MB2 194 aa11.46□□□□□ -0.57
HERC4-203ENST00000395185 CDCA7Q9BWT1 371 aaPredicted RBP11.46□□□□□ -0.57
HERC4-203ENST00000395185 RGS12O14924 1447 aa11.45□□□□□ -0.58
HERC4-203ENST00000395185 SPDYE4A6NLX3 237 aa11.45□□□□□ -0.58
HERC4-203ENST00000395185 PPP2R1AP30153 589 aa11.45□□□□□ -0.58
HERC4-203ENST00000395185 GGNBP2Q9H3C7 697 aa11.45□□□□□ -0.58
HERC4-203ENST00000395185 AXIN2Q9Y2T1 843 aa11.45□□□□□ -0.58
HERC4-203ENST00000395185 TRPM3Q9HCF6 1732 aaPredicted RBP11.45□□□□□ -0.58
HERC4-203ENST00000395185 IP6K1Q92551 441 aa11.44□□□□□ -0.58
HERC4-203ENST00000395185 CARD10Q9BWT7 1032 aa11.44□□□□□ -0.58
HERC4-203ENST00000395185 NLRP2Q9NX02 1062 aa11.44□□□□□ -0.58
HERC4-203ENST00000395185 WDR17Q8IZU2 1322 aa11.43□□□□□ -0.58
HERC4-203ENST00000395185 FAM196AQ6ZSG2 479 aa11.43□□□□□ -0.58
HERC4-203ENST00000395185 MORC1Q86VD1 984 aa11.43□□□□□ -0.58
HERC4-203ENST00000395185 ALS2Q96Q42 1657 aa11.43□□□□□ -0.58
HERC4-203ENST00000395185 EXOC5O00471 708 aa11.42□□□□□ -0.58
HERC4-203ENST00000395185 PNISRQ8TF01 805 aaKnown RBP11.42□□□□□ -0.58
HERC4-203ENST00000395185 INSRP06213 1382 aa11.41□□□□□ -0.58
HERC4-203ENST00000395185 AKAP12Q02952 1782 aa11.41□□□□□ -0.58
HERC4-203ENST00000395185 DDB1Q16531 1140 aa11.41□□□□□ -0.58
HERC4-203ENST00000395185 ANKRD24Q8TF21 1146 aa11.41□□□□□ -0.58
HERC4-203ENST00000395185 LTV1Q96GA3 475 aaPredicted RBP11.41□□□□□ -0.58
HERC4-203ENST00000395185 OVOS2A0A0J9YW53 1432 aa11.41□□□□□ -0.58
HERC4-203ENST00000395185 OVOS2Q6IE36 1432 aa11.41□□□□□ -0.58
HERC4-203ENST00000395185 COL14A1Q05707 1796 aaKnown RBP11.41□□□□□ -0.58
HERC4-203ENST00000395185 MON2Q7Z3U7 1717 aa11.4□□□□□ -0.58
HERC4-203ENST00000395185 CRB1P82279 1406 aa11.4□□□□□ -0.58
HERC4-203ENST00000395185 PPM1GO15355 546 aaPredicted RBP11.39□□□□□ -0.59
HERC4-203ENST00000395185 HOXC9P31274 260 aa11.39□□□□□ -0.59
HERC4-203ENST00000395185 POLKQ9UBT6 870 aa11.39□□□□□ -0.59
HERC4-203ENST00000395185 MAP3K19Q56UN5 1328 aa11.38□□□□□ -0.59
HERC4-203ENST00000395185 NRKQ7Z2Y5 1582 aa11.38□□□□□ -0.59
HERC4-203ENST00000395185 FBLN1P23142 703 aa11.38□□□□□ -0.59
HERC4-203ENST00000395185 BAG6P46379 1132 aa11.38□□□□□ -0.59
HERC4-203ENST00000395185 MTHFSP49914 203 aa11.38□□□□□ -0.59
HERC4-203ENST00000395185 RRS1Q15050 365 aaKnown RBP11.38□□□□□ -0.59
HERC4-203ENST00000395185 MRS2Q9HD23 443 aa11.38□□□□□ -0.59
HERC4-203ENST00000395185 CAMTA1Q9Y6Y1 1673 aa11.38□□□□□ -0.59
HERC4-203ENST00000395185 SLIT3O75094 1523 aa11.38□□□□□ -0.59
HERC4-203ENST00000395185 COL5A2P05997 1499 aaPredicted RBP11.38□□□□□ -0.59
HERC4-203ENST00000395185 IL2RBP14784 551 aa11.37□□□□□ -0.59
HERC4-203ENST00000395185 ERBB3P21860 1342 aa11.36□□□□□ -0.59
HERC4-203ENST00000395185 TNNT2P45379 298 aaPredicted RBP11.36□□□□□ -0.59
HERC4-203ENST00000395185 CNGB1Q14028 1251 aaPredicted RBP11.36□□□□□ -0.59
HERC4-203ENST00000395185 FAM182BQ5T319 152 aa11.36□□□□□ -0.59
HERC4-203ENST00000395185 BLMP54132 1417 aaPredicted RBP11.35□□□□□ -0.59
HERC4-203ENST00000395185 SMG6Q86US8 1419 aaKnown RBP11.35□□□□□ -0.59
HERC4-203ENST00000395185 NWD2Q9ULI1 1742 aa11.35□□□□□ -0.59
HERC4-203ENST00000395185 TRIM37O94972 964 aa11.35□□□□□ -0.59
HERC4-203ENST00000395185 GLI3P10071 1580 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms