RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 DZIP1LQ8IYY4 767 aaKnown RBP19.78■□□□□ 0.76
CPSF7-202ENST00000394888 NWD1Q149M9 1564 aa19.78■□□□□ 0.76
CPSF7-202ENST00000394888 ZBTB40Q9NUA8 1239 aa19.78■□□□□ 0.76
CPSF7-202ENST00000394888 ATF7IPQ6VMQ6 1270 aa19.78■□□□□ 0.76
CPSF7-202ENST00000394888 TSPYL6Q8N831 410 aa19.78■□□□□ 0.76
CPSF7-202ENST00000394888 CCDC61Q9Y6R9 512 aa19.78■□□□□ 0.76
CPSF7-202ENST00000394888 HMOX1P09601 288 aa19.77■□□□□ 0.76
CPSF7-202ENST00000394888 NFE2L2Q16236 605 aa19.77■□□□□ 0.76
CPSF7-202ENST00000394888 RGS12O14924 1447 aa19.77■□□□□ 0.76
CPSF7-202ENST00000394888 RRS1Q15050 365 aaKnown RBP19.77■□□□□ 0.75
CPSF7-202ENST00000394888 MAPK8IP3Q9UPT6 1336 aa19.76■□□□□ 0.75
CPSF7-202ENST00000394888 TMEM57Q8N5G2 664 aa19.76■□□□□ 0.75
CPSF7-202ENST00000394888 HDAC1Q13547 482 aaPredicted RBP19.76■□□□□ 0.75
CPSF7-202ENST00000394888 DEKP35659 375 aaKnown RBP19.75■□□□□ 0.75
CPSF7-202ENST00000394888 VAMP4O75379 141 aa19.75■□□□□ 0.75
CPSF7-202ENST00000394888 PMFBP1Q8TBY8 1022 aa19.75■□□□□ 0.75
CPSF7-202ENST00000394888 SMC4Q9NTJ3 1288 aa19.75■□□□□ 0.75
CPSF7-202ENST00000394888 N4BP2Q86UW6 1770 aaPredicted RBP19.75■□□□□ 0.75
CPSF7-202ENST00000394888 CHD2O14647 1828 aaKnown RBP19.74■□□□□ 0.75
CPSF7-202ENST00000394888 LAS1LQ9Y4W2 734 aaKnown RBP19.74■□□□□ 0.75
CPSF7-202ENST00000394888 CANXP27824 592 aaKnown RBP19.74■□□□□ 0.75
CPSF7-202ENST00000394888 TUBGCP6Q96RT7 1819 aa19.74■□□□□ 0.75
CPSF7-202ENST00000394888 ALDH1L2Q3SY69 923 aa19.74■□□□□ 0.75
CPSF7-202ENST00000394888 PLEKHG3A1L390 1219 aa19.73■□□□□ 0.75
CPSF7-202ENST00000394888 CEBPAP49715 358 aaPredicted RBP19.73■□□□□ 0.75
CPSF7-202ENST00000394888 CEP170BQ9Y4F5 1589 aaPredicted RBP19.72■□□□□ 0.75
CPSF7-202ENST00000394888 MRPL50Q8N5N7 158 aaKnown RBP19.72■□□□□ 0.75
CPSF7-202ENST00000394888 MBIPQ9NS73 344 aa19.72■□□□□ 0.75
CPSF7-202ENST00000394888 TTC21BQ7Z4L5 1316 aa19.72■□□□□ 0.75
CPSF7-202ENST00000394888 SMC5Q8IY18 1101 aa19.72■□□□□ 0.75
CPSF7-202ENST00000394888 ZNF142P52746 1687 aaPredicted RBP19.71■□□□□ 0.75
CPSF7-202ENST00000394888 FAM208AQ9UK61 1670 aaKnown RBP19.71■□□□□ 0.75
CPSF7-202ENST00000394888 ACEP12821 1306 aa19.71■□□□□ 0.75
CPSF7-202ENST00000394888 FAM83GA6ND36 823 aa19.71■□□□□ 0.75
CPSF7-202ENST00000394888 AEBP1Q8IUX7 1158 aa19.7■□□□□ 0.74
CPSF7-202ENST00000394888 EIF4A2Q14240 407 aaKnown RBP19.7■□□□□ 0.74
CPSF7-202ENST00000394888 ABCC4O15439 1325 aa19.69■□□□□ 0.74
CPSF7-202ENST00000394888 LTN1O94822 1766 aa19.69■□□□□ 0.74
CPSF7-202ENST00000394888 DDRGK1Q96HY6 314 aa19.69■□□□□ 0.74
CPSF7-202ENST00000394888 CRB1P82279 1406 aa19.69■□□□□ 0.74
CPSF7-202ENST00000394888 IFT57Q9NWB7 429 aa19.69■□□□□ 0.74
CPSF7-202ENST00000394888 PPM1GO15355 546 aaPredicted RBP19.68■□□□□ 0.74
CPSF7-202ENST00000394888 SIRT2Q8IXJ6 389 aa19.68■□□□□ 0.74
CPSF7-202ENST00000394888 ZBTB7BO15156 539 aaPredicted RBP19.67■□□□□ 0.74
CPSF7-202ENST00000394888 C8orf58Q8NAV2 365 aa19.67■□□□□ 0.74
CPSF7-202ENST00000394888 TBC1D32Q96NH3 1257 aa19.66■□□□□ 0.74
CPSF7-202ENST00000394888 KIF16BQ96L93 1317 aa19.66■□□□□ 0.74
CPSF7-202ENST00000394888 ZNF692Q9BU19 519 aaPredicted RBP19.65■□□□□ 0.74
CPSF7-202ENST00000394888 DDX19BQ9UMR2 479 aa19.65■□□□□ 0.74
CPSF7-202ENST00000394888 RGPD2P0DJD1 1756 aa19.65■□□□□ 0.74
CPSF7-202ENST00000394888 COG3Q96JB2 828 aa19.65■□□□□ 0.74
CPSF7-202ENST00000394888 PNNQ9H307 717 aaKnown RBP19.65■□□□□ 0.74
CPSF7-202ENST00000394888 RWDD1Q9H446 243 aaPredicted RBP19.65■□□□□ 0.74
CPSF7-202ENST00000394888 DCTN1Q14203 1278 aa19.64■□□□□ 0.74
CPSF7-202ENST00000394888 CFAP44Q96MT7 982 aa19.64■□□□□ 0.73
CPSF7-202ENST00000394888 KDRP35968 1356 aa19.63■□□□□ 0.73
CPSF7-202ENST00000394888 ITPRIPQ8IWB1 547 aa19.63■□□□□ 0.73
CPSF7-202ENST00000394888 ANTXR1Q9H6X2 564 aa19.63■□□□□ 0.73
CPSF7-202ENST00000394888 PHRF1Q9P1Y6 1649 aaKnown RBP19.63■□□□□ 0.73
CPSF7-202ENST00000394888 FTSJ3Q8IY81 847 aaKnown RBP19.63■□□□□ 0.73
CPSF7-202ENST00000394888 SLC26A8Q96RN1 970 aa19.63■□□□□ 0.73
CPSF7-202ENST00000394888 ATP10DQ9P241 1426 aa19.62■□□□□ 0.73
CPSF7-202ENST00000394888 ARHGAP45Q92619 1136 aa19.62■□□□□ 0.73
CPSF7-202ENST00000394888 ZNF428Q96B54 188 aa19.62■□□□□ 0.73
CPSF7-202ENST00000394888 NUCB1Q02818 461 aa19.62■□□□□ 0.73
CPSF7-202ENST00000394888 NFKBIBQ15653 356 aa19.61■□□□□ 0.73
CPSF7-202ENST00000394888 HSP90AB2PQ58FF8 381 aa19.61■□□□□ 0.73
CPSF7-202ENST00000394888 BCL11AQ9H165 835 aa19.61■□□□□ 0.73
CPSF7-202ENST00000394888 NEFMP07197 916 aa19.6■□□□□ 0.73
CPSF7-202ENST00000394888 USP35Q9P2H5 1018 aa19.6■□□□□ 0.73
CPSF7-202ENST00000394888 KRT24Q2M2I5 525 aa19.6■□□□□ 0.73
CPSF7-202ENST00000394888 TBX22Q9Y458 520 aa19.59■□□□□ 0.73
CPSF7-202ENST00000394888 AMOTL2Q9Y2J4 779 aa19.58■□□□□ 0.73
CPSF7-202ENST00000394888 ARHGEF10O15013 1369 aa19.58■□□□□ 0.73
CPSF7-202ENST00000394888 NFAT5O94916 1531 aa19.58■□□□□ 0.73
CPSF7-202ENST00000394888 GNAI1P63096 354 aa19.58■□□□□ 0.72
CPSF7-202ENST00000394888 MAP3K19Q56UN5 1328 aa19.58■□□□□ 0.72
CPSF7-202ENST00000394888 HDGFP51858 240 aaKnown RBP19.57■□□□□ 0.72
CPSF7-202ENST00000394888 ADAMTSL3P82987 1691 aa19.57■□□□□ 0.72
CPSF7-202ENST00000394888 MED1Q15648 1581 aaPredicted RBP19.57■□□□□ 0.72
CPSF7-202ENST00000394888 CHL1O00533 1208 aa19.57■□□□□ 0.72
CPSF7-202ENST00000394888 NUTM2FA1L443 756 aa19.56■□□□□ 0.72
CPSF7-202ENST00000394888 ANKARQ7Z5J8 1434 aa19.56■□□□□ 0.72
CPSF7-202ENST00000394888 KDM3BQ7LBC6 1761 aa19.56■□□□□ 0.72
CPSF7-202ENST00000394888 TWISTNBQ3B726 338 aaPredicted RBP19.55■□□□□ 0.72
CPSF7-202ENST00000394888 SULT6B1Q6IMI4 303 aa19.55■□□□□ 0.72
CPSF7-202ENST00000394888 CACNA1FO60840 1977 aa19.54■□□□□ 0.72
CPSF7-202ENST00000394888 ESF1Q9H501 851 aaKnown RBP19.54■□□□□ 0.72
CPSF7-202ENST00000394888 C1orf115Q9H7X2 142 aa19.54■□□□□ 0.72
CPSF7-202ENST00000394888 KIAA0232Q92628 1395 aa19.54■□□□□ 0.72
CPSF7-202ENST00000394888 ELL2O00472 640 aaPredicted RBP19.54■□□□□ 0.72
CPSF7-202ENST00000394888 NCOA3Q9Y6Q9 1424 aa19.53■□□□□ 0.72
CPSF7-202ENST00000394888 SBNO1A3KN83 1393 aa19.53■□□□□ 0.72
CPSF7-202ENST00000394888 KIF24Q5T7B8 1368 aa19.53■□□□□ 0.72
CPSF7-202ENST00000394888 CAMTA1Q9Y6Y1 1673 aa19.53■□□□□ 0.72
CPSF7-202ENST00000394888 TBC1D2Q9BYX2 928 aa19.53■□□□□ 0.72
CPSF7-202ENST00000394888 IGSF1Q8N6C5 1336 aa19.53■□□□□ 0.72
CPSF7-202ENST00000394888 FOXO3O43524 673 aa19.52■□□□□ 0.72
CPSF7-202ENST00000394888 TTC21AQ8NDW8 1320 aa19.52■□□□□ 0.72
CPSF7-202ENST00000394888 TRPM3Q9HCF6 1732 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms