RNA–Protein interactions for RNA: ENST00000394801.8

UBE2D3-207, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-207ENST00000394801 RWDD1Q9H446 243 aaPredicted RBP19.61■□□□□ 0.73
UBE2D3-207ENST00000394801 ACEP12821 1306 aa19.6■□□□□ 0.73
UBE2D3-207ENST00000394801 DEKP35659 375 aaKnown RBP19.6■□□□□ 0.73
UBE2D3-207ENST00000394801 RRS1Q15050 365 aaKnown RBP19.6■□□□□ 0.73
UBE2D3-207ENST00000394801 SLC26A8Q96RN1 970 aa19.59■□□□□ 0.73
UBE2D3-207ENST00000394801 KIF16BQ96L93 1317 aa19.59■□□□□ 0.73
UBE2D3-207ENST00000394801 NOB1Q9ULX3 412 aaKnown RBP19.59■□□□□ 0.73
UBE2D3-207ENST00000394801 OVOS2A0A0J9YW53 1432 aa19.59■□□□□ 0.73
UBE2D3-207ENST00000394801 OVOS2Q6IE36 1432 aa19.59■□□□□ 0.73
UBE2D3-207ENST00000394801 ZNF853P0CG23 659 aa19.58■□□□□ 0.73
UBE2D3-207ENST00000394801 DDX19BQ9UMR2 479 aa19.58■□□□□ 0.73
UBE2D3-207ENST00000394801 USP6P35125 1406 aa19.58■□□□□ 0.73
UBE2D3-207ENST00000394801 PTCH1Q13635 1447 aa19.58■□□□□ 0.73
UBE2D3-207ENST00000394801 IPO8O15397 1037 aaKnown RBP19.58■□□□□ 0.72
UBE2D3-207ENST00000394801 ILDR1Q86SU0 546 aaPredicted RBP19.58■□□□□ 0.72
UBE2D3-207ENST00000394801 IFT57Q9NWB7 429 aa19.58■□□□□ 0.72
UBE2D3-207ENST00000394801 SSH2Q76I76 1423 aa19.57■□□□□ 0.72
UBE2D3-207ENST00000394801 THEMISQ8N1K5 641 aaPredicted RBP19.57■□□□□ 0.72
UBE2D3-207ENST00000394801 AMOTL2Q9Y2J4 779 aa19.57■□□□□ 0.72
UBE2D3-207ENST00000394801 FER1L4A9Z1Z3 1794 aa19.57■□□□□ 0.72
UBE2D3-207ENST00000394801 VIRMAQ69YN4 1812 aaKnown RBP19.56■□□□□ 0.72
UBE2D3-207ENST00000394801 GNAI1P63096 354 aa19.56■□□□□ 0.72
UBE2D3-207ENST00000394801 DIP2AQ14689 1571 aa19.56■□□□□ 0.72
UBE2D3-207ENST00000394801 USP31Q70CQ4 1352 aa19.56■□□□□ 0.72
UBE2D3-207ENST00000394801 LMOD3Q0VAK6 560 aa19.56■□□□□ 0.72
UBE2D3-207ENST00000394801 NALCNQ8IZF0 1738 aa19.55■□□□□ 0.72
UBE2D3-207ENST00000394801 VAMP4O75379 141 aa19.54■□□□□ 0.72
UBE2D3-207ENST00000394801 HDAC1Q13547 482 aaPredicted RBP19.54■□□□□ 0.72
UBE2D3-207ENST00000394801 PDZRN3Q9UPQ7 1066 aa19.54■□□□□ 0.72
UBE2D3-207ENST00000394801 DLG5Q8TDM6 1919 aa19.53■□□□□ 0.72
UBE2D3-207ENST00000394801 CFAP44Q96MT7 982 aa19.52■□□□□ 0.72
UBE2D3-207ENST00000394801 EIF4A2Q14240 407 aaKnown RBP19.52■□□□□ 0.72
UBE2D3-207ENST00000394801 ITPRIPQ8IWB1 547 aa19.52■□□□□ 0.72
UBE2D3-207ENST00000394801 TMEM57Q8N5G2 664 aa19.52■□□□□ 0.72
UBE2D3-207ENST00000394801 ARHGAP45Q92619 1136 aa19.52■□□□□ 0.72
UBE2D3-207ENST00000394801 THUMPD2Q9BTF0 503 aaKnown RBP19.52■□□□□ 0.72
UBE2D3-207ENST00000394801 ZBTB40Q9NUA8 1239 aa19.52■□□□□ 0.72
UBE2D3-207ENST00000394801 TTC21AQ8NDW8 1320 aa19.52■□□□□ 0.71
UBE2D3-207ENST00000394801 LAS1LQ9Y4W2 734 aaKnown RBP19.51■□□□□ 0.71
UBE2D3-207ENST00000394801 NUTM2FA1L443 756 aa19.5■□□□□ 0.71
UBE2D3-207ENST00000394801 MBIPQ9NS73 344 aa19.5■□□□□ 0.71
UBE2D3-207ENST00000394801 MRPL50Q8N5N7 158 aaKnown RBP19.49■□□□□ 0.71
UBE2D3-207ENST00000394801 XRN1Q8IZH2 1706 aaKnown RBP19.49■□□□□ 0.71
UBE2D3-207ENST00000394801 TSPYL6Q8N831 410 aa19.48■□□□□ 0.71
UBE2D3-207ENST00000394801 USP19O94966 1318 aa19.48■□□□□ 0.71
UBE2D3-207ENST00000394801 PIK3R4Q99570 1358 aa19.48■□□□□ 0.71
UBE2D3-207ENST00000394801 PEAK1Q9H792 1746 aa19.48■□□□□ 0.71
UBE2D3-207ENST00000394801 NBR1Q14596 966 aa19.48■□□□□ 0.71
UBE2D3-207ENST00000394801 RGPD1P0DJD0 1748 aa19.47■□□□□ 0.71
UBE2D3-207ENST00000394801 SULT6B1Q6IMI4 303 aa19.47■□□□□ 0.71
UBE2D3-207ENST00000394801 SMC5Q8IY18 1101 aa19.47■□□□□ 0.71
UBE2D3-207ENST00000394801 RIMS1Q86UR5 1692 aaKnown RBP19.46■□□□□ 0.71
UBE2D3-207ENST00000394801 AEBP1Q8IUX7 1158 aa19.46■□□□□ 0.71
UBE2D3-207ENST00000394801 TWISTNBQ3B726 338 aaPredicted RBP19.45■□□□□ 0.7
UBE2D3-207ENST00000394801 HSP90AB2PQ58FF8 381 aa19.45■□□□□ 0.7
UBE2D3-207ENST00000394801 FAM83GA6ND36 823 aa19.44■□□□□ 0.7
UBE2D3-207ENST00000394801 ANKARQ7Z5J8 1434 aa19.44■□□□□ 0.7
UBE2D3-207ENST00000394801 CHMP4BQ9H444 224 aaKnown RBP19.44■□□□□ 0.7
UBE2D3-207ENST00000394801 SEC24BO95487 1268 aa19.43■□□□□ 0.7
UBE2D3-207ENST00000394801 C8orf58Q8NAV2 365 aa19.43■□□□□ 0.7
UBE2D3-207ENST00000394801 RGPD8O14715 1765 aaPredicted RBP19.43■□□□□ 0.7
UBE2D3-207ENST00000394801 ZBTB7BO15156 539 aaPredicted RBP19.42■□□□□ 0.7
UBE2D3-207ENST00000394801 PLPPR3Q6T4P5 718 aa19.42■□□□□ 0.7
UBE2D3-207ENST00000394801 NGDNQ8NEJ9 315 aaKnown RBP19.42■□□□□ 0.7
UBE2D3-207ENST00000394801 MAP3K19Q56UN5 1328 aa19.42■□□□□ 0.7
UBE2D3-207ENST00000394801 KDM4FA0A1W2PPD8 638 aa19.42■□□□□ 0.7
UBE2D3-207ENST00000394801 SBNO1A3KN83 1393 aa19.41■□□□□ 0.7
UBE2D3-207ENST00000394801 ARHGEF10O15013 1369 aa19.41■□□□□ 0.7
UBE2D3-207ENST00000394801 ABCC4O15439 1325 aa19.41■□□□□ 0.7
UBE2D3-207ENST00000394801 CEP170BQ9Y4F5 1589 aaPredicted RBP19.41■□□□□ 0.7
UBE2D3-207ENST00000394801 DCTN1Q14203 1278 aa19.41■□□□□ 0.7
UBE2D3-207ENST00000394801 USP35Q9P2H5 1018 aa19.41■□□□□ 0.7
UBE2D3-207ENST00000394801 FLT4P35916 1363 aa19.4■□□□□ 0.7
UBE2D3-207ENST00000394801 CHL1O00533 1208 aa19.4■□□□□ 0.7
UBE2D3-207ENST00000394801 KCNA6P17658 529 aa19.4■□□□□ 0.7
UBE2D3-207ENST00000394801 DAXXQ9UER7 740 aaPredicted RBP19.4■□□□□ 0.7
UBE2D3-207ENST00000394801 ELL2O00472 640 aaPredicted RBP19.4■□□□□ 0.7
UBE2D3-207ENST00000394801 KDRP35968 1356 aa19.39■□□□□ 0.69
UBE2D3-207ENST00000394801 PIK3C2AO00443 1686 aa19.39■□□□□ 0.69
UBE2D3-207ENST00000394801 HAP1P54257 671 aaPredicted RBP19.39■□□□□ 0.69
UBE2D3-207ENST00000394801 FMN2Q9NZ56 1722 aa19.38■□□□□ 0.69
UBE2D3-207ENST00000394801 RTL5Q5HYW3 569 aaPredicted RBP19.38■□□□□ 0.69
UBE2D3-207ENST00000394801 API5Q9BZZ5 524 aaKnown RBP19.38■□□□□ 0.69
UBE2D3-207ENST00000394801 SLC4A3P48751 1232 aa19.37■□□□□ 0.69
UBE2D3-207ENST00000394801 KIF24Q5T7B8 1368 aa19.37■□□□□ 0.69
UBE2D3-207ENST00000394801 KIAA0232Q92628 1395 aa19.37■□□□□ 0.69
UBE2D3-207ENST00000394801 NUCB1Q02818 461 aa19.37■□□□□ 0.69
UBE2D3-207ENST00000394801 USP54Q70EL1 1684 aa19.36■□□□□ 0.69
UBE2D3-207ENST00000394801 CRB1P82279 1406 aa19.35■□□□□ 0.69
UBE2D3-207ENST00000394801 UPF2Q9HAU5 1272 aaKnown RBP19.35■□□□□ 0.69
UBE2D3-207ENST00000394801 IGSF1Q8N6C5 1336 aa19.35■□□□□ 0.69
UBE2D3-207ENST00000394801 TBC1D32Q96NH3 1257 aa19.34■□□□□ 0.69
UBE2D3-207ENST00000394801 SOX12O15370 315 aa19.34■□□□□ 0.69
UBE2D3-207ENST00000394801 MCM10Q7L590 875 aa19.34■□□□□ 0.69
UBE2D3-207ENST00000394801 GCC1Q96CN9 775 aa19.33■□□□□ 0.69
UBE2D3-207ENST00000394801 CHD2O14647 1828 aaKnown RBP19.33■□□□□ 0.68
UBE2D3-207ENST00000394801 NLRP6P59044 892 aa19.33■□□□□ 0.68
UBE2D3-207ENST00000394801 EYA1Q99502 592 aa19.33■□□□□ 0.68
UBE2D3-207ENST00000394801 AMPHP49418 695 aa19.32■□□□□ 0.68
UBE2D3-207ENST00000394801 ANKLE2Q86XL3 938 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms