RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 FAM43BQ6ZT52 329 aaPredicted RBP15.09■□□□□ 0.01
SLC28A1-203ENST00000394573 SLC26A8Q96RN1 970 aa15.09■□□□□ 0.01
SLC28A1-203ENST00000394573 GOLGA6L6A8MZA4 724 aa15.08■□□□□ 0.01
SLC28A1-203ENST00000394573 KDM4AO75164 1064 aa15.08■□□□□ 0
SLC28A1-203ENST00000394573 EGFL6Q8IUX8 553 aa15.08■□□□□ 0
SLC28A1-203ENST00000394573 JRKLQ9Y4A0 524 aa15.08■□□□□ 0
SLC28A1-203ENST00000394573 CCDC144AA2RUR9 1427 aa15.08■□□□□ 0
SLC28A1-203ENST00000394573 ANKRD30AQ9BXX3 1397 aa15.08■□□□□ 0
SLC28A1-203ENST00000394573 LRRFIP2Q9Y608 721 aaKnown RBP15.07■□□□□ 0
SLC28A1-203ENST00000394573 FGD5Q6ZNL6 1462 aa15.07■□□□□ 0
SLC28A1-203ENST00000394573 KNSTRNQ9Y448 316 aa15.07■□□□□ 0
SLC28A1-203ENST00000394573 EFCAB5A4FU69 1503 aa15.07■□□□□ 0
SLC28A1-203ENST00000394573 REC8O95072 547 aa15.07■□□□□ 0
SLC28A1-203ENST00000394573 SYCP1Q15431 976 aa15.07■□□□□ 0
SLC28A1-203ENST00000394573 CDCA8Q53HL2 280 aa15.07■□□□□ 0
SLC28A1-203ENST00000394573 EXOC6BQ9Y2D4 811 aa15.07■□□□□ 0
SLC28A1-203ENST00000394573 TSGA10IPQ3SY00 556 aa15.06■□□□□ 0
SLC28A1-203ENST00000394573 NOL8Q76FK4 1167 aaKnown RBP15.06■□□□□ 0
SLC28A1-203ENST00000394573 SYAP1Q96A49 352 aaPredicted RBP15.06■□□□□ 0
SLC28A1-203ENST00000394573 KIF1BPQ96EK5 621 aa15.06■□□□□ 0
SLC28A1-203ENST00000394573 FAM53CQ9NYF3 392 aa15.06■□□□□ 0
SLC28A1-203ENST00000394573 BMS1Q14692 1282 aaKnown RBP15.05■□□□□ 0
SLC28A1-203ENST00000394573 DZIP1LQ8IYY4 767 aaKnown RBP15.05■□□□□ -0
SLC28A1-203ENST00000394573 CNKSR2Q8WXI2 1034 aa15.05■□□□□ -0
SLC28A1-203ENST00000394573 SMARCE1Q969G3 411 aa15.05■□□□□ -0
SLC28A1-203ENST00000394573 ZCCHC17Q9NP64 241 aaKnown RBP15.05■□□□□ -0
SLC28A1-203ENST00000394573 ZNF644Q9H582 1327 aaPredicted RBP15.05■□□□□ -0
SLC28A1-203ENST00000394573 TPD52L1Q16890 204 aaPredicted RBP15.04■□□□□ -0
SLC28A1-203ENST00000394573 UVSSAQ2YD98 709 aa15.04■□□□□ -0
SLC28A1-203ENST00000394573 IRF6O14896 467 aa15.04■□□□□ -0
SLC28A1-203ENST00000394573 ZSCAN26Q16670 478 aa15.04■□□□□ -0
SLC28A1-203ENST00000394573 ANKRD45Q5TZF3 282 aa15.04■□□□□ -0
SLC28A1-203ENST00000394573 PACS2Q86VP3 889 aa15.04■□□□□ -0
SLC28A1-203ENST00000394573 FAM184AQ8NB25 1140 aa15.04■□□□□ -0
SLC28A1-203ENST00000394573 NRBP1Q9UHY1 535 aa15.03■□□□□ -0
SLC28A1-203ENST00000394573 RGL3Q3MIN7 710 aa15.03■□□□□ -0
SLC28A1-203ENST00000394573 CCDC186Q7Z3E2 898 aa15.03■□□□□ -0
SLC28A1-203ENST00000394573 RABEP1Q15276 862 aa15.02■□□□□ -0
SLC28A1-203ENST00000394573 CTR9Q6PD62 1173 aa15.02■□□□□ -0
SLC28A1-203ENST00000394573 CHD1LQ86WJ1 897 aa15.02■□□□□ -0
SLC28A1-203ENST00000394573 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.02■□□□□ -0
SLC28A1-203ENST00000394573 ZNF526Q8TF50 670 aaPredicted RBP15.02■□□□□ -0
SLC28A1-203ENST00000394573 PZPP20742 1482 aa15.02■□□□□ -0
SLC28A1-203ENST00000394573 ANKRD65E5RJM6 399 aa15.02□□□□□ -0.01
SLC28A1-203ENST00000394573 PHF14O94880 888 aa15.02□□□□□ -0.01
SLC28A1-203ENST00000394573 BMP2KLQ5H9B9 411 aa15.02□□□□□ -0.01
SLC28A1-203ENST00000394573 GIMAP6Q6P9H5 292 aa15.02□□□□□ -0.01
SLC28A1-203ENST00000394573 ATG3Q9NT62 314 aa15.02□□□□□ -0.01
SLC28A1-203ENST00000394573 NUCB1Q02818 461 aa15.02□□□□□ -0.01
SLC28A1-203ENST00000394573 HDAC1Q13547 482 aaPredicted RBP15.02□□□□□ -0.01
SLC28A1-203ENST00000394573 DRC7Q8IY82 874 aa15.02□□□□□ -0.01
SLC28A1-203ENST00000394573 CXorf56Q9H5V9 222 aa15.02□□□□□ -0.01
SLC28A1-203ENST00000394573 RRP15Q9Y3B9 282 aaKnown RBP15.02□□□□□ -0.01
SLC28A1-203ENST00000394573 TULP1O00294 542 aaPredicted RBP15.01□□□□□ -0.01
SLC28A1-203ENST00000394573 USP48Q86UV5 1035 aa15.01□□□□□ -0.01
SLC28A1-203ENST00000394573 SUFUQ9UMX1 484 aa15.01□□□□□ -0.01
SLC28A1-203ENST00000394573 PLA2G4AP47712 749 aa15.01□□□□□ -0.01
SLC28A1-203ENST00000394573 ZKSCAN2Q63HK3 967 aa15.01□□□□□ -0.01
SLC28A1-203ENST00000394573 CEP135Q66GS9 1140 aa15.01□□□□□ -0.01
SLC28A1-203ENST00000394573 RNF217Q8TC41 542 aa15.01□□□□□ -0.01
SLC28A1-203ENST00000394573 CWC22Q9HCG8 908 aaKnown RBP15.01□□□□□ -0.01
SLC28A1-203ENST00000394573 FHOD1Q9Y613 1164 aa15.01□□□□□ -0.01
SLC28A1-203ENST00000394573 ANKRD36BQ8N2N9 1353 aa15.01□□□□□ -0.01
SLC28A1-203ENST00000394573 SUPT6HQ7KZ85 1726 aaKnown RBP15□□□□□ -0.01
SLC28A1-203ENST00000394573 TTC31Q49AM3 519 aaPredicted RBP15□□□□□ -0.01
SLC28A1-203ENST00000394573 SRLQ86TD4 932 aa15□□□□□ -0.01
SLC28A1-203ENST00000394573 TXLNBQ8N3L3 684 aa15□□□□□ -0.01
SLC28A1-203ENST00000394573 USP26Q9BXU7 913 aa15□□□□□ -0.01
SLC28A1-203ENST00000394573 BRMS1Q9HCU9 246 aa15□□□□□ -0.01
SLC28A1-203ENST00000394573 SNAPC4Q5SXM2 1469 aa14.99□□□□□ -0.01
SLC28A1-203ENST00000394573 UHRF1BP1Q6BDS2 1440 aa14.99□□□□□ -0.01
SLC28A1-203ENST00000394573 GOLIM4O00461 696 aa14.99□□□□□ -0.01
SLC28A1-203ENST00000394573 TDO2P48775 406 aa14.99□□□□□ -0.01
SLC28A1-203ENST00000394573 MUM1L1Q5H9M0 696 aa14.99□□□□□ -0.01
SLC28A1-203ENST00000394573 TESK2Q96S53 571 aa14.99□□□□□ -0.01
SLC28A1-203ENST00000394573 USP27XA6NNY8 438 aa14.99□□□□□ -0.01
SLC28A1-203ENST00000394573 PAXBP1Q9Y5B6 917 aa14.99□□□□□ -0.01
SLC28A1-203ENST00000394573 SATB1Q01826 763 aa14.98□□□□□ -0.01
SLC28A1-203ENST00000394573 ERCC6LQ2NKX8 1250 aa14.98□□□□□ -0.01
SLC28A1-203ENST00000394573 TEX35Q5T0J7 233 aa14.98□□□□□ -0.01
SLC28A1-203ENST00000394573 CC2D2AQ9P2K1 1620 aa14.98□□□□□ -0.01
SLC28A1-203ENST00000394573 TRIM27P14373 513 aa14.98□□□□□ -0.01
SLC28A1-203ENST00000394573 GRIPAP1Q4V328 841 aa14.98□□□□□ -0.01
SLC28A1-203ENST00000394573 GOLGA6L1Q8N7Z2 621 aa14.98□□□□□ -0.01
SLC28A1-203ENST00000394573 LRRN4CLQ8ND94 238 aa14.98□□□□□ -0.01
SLC28A1-203ENST00000394573 DEF6Q9H4E7 631 aa14.98□□□□□ -0.01
SLC28A1-203ENST00000394573 UGGT2Q9NYU1 1516 aa14.98□□□□□ -0.01
SLC28A1-203ENST00000394573 A0A1B0GUL7 405 aa14.97□□□□□ -0.01
SLC28A1-203ENST00000394573 PNMA6AP0CW24 399 aaPredicted RBP14.97□□□□□ -0.01
SLC28A1-203ENST00000394573 HSP90B1P14625 803 aaKnown RBP14.97□□□□□ -0.01
SLC28A1-203ENST00000394573 SYTL4Q96C24 671 aaPredicted RBP14.97□□□□□ -0.01
SLC28A1-203ENST00000394573 C1orf115Q9H7X2 142 aa14.97□□□□□ -0.01
SLC28A1-203ENST00000394573 PTPRCP08575 1304 aa14.97□□□□□ -0.01
SLC28A1-203ENST00000394573 ERBB3P21860 1342 aa14.97□□□□□ -0.01
SLC28A1-203ENST00000394573 ATP2B1P20020 1258 aa14.97□□□□□ -0.01
SLC28A1-203ENST00000394573 CREBRFQ8IUR6 639 aa14.97□□□□□ -0.01
SLC28A1-203ENST00000394573 CLCN6P51797 869 aa14.96□□□□□ -0.01
SLC28A1-203ENST00000394573 DONSONQ9NYP3 566 aa14.96□□□□□ -0.01
SLC28A1-203ENST00000394573 MAGI3Q5TCQ9 1506 aa14.96□□□□□ -0.01
SLC28A1-203ENST00000394573 KIAA0586Q9BVV6 1533 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms