RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 CWC22Q9HCG8 908 aaKnown RBP28.15■■■□□ 2.1
RARA-202ENST00000394081 PNPLA6Q8IY17 1366 aa28.13■■■□□ 2.09
RARA-202ENST00000394081 FOXD4L1Q9NU39 408 aa28.12■■■□□ 2.09
RARA-202ENST00000394081 MTERF4Q7Z6M4 381 aaKnown RBP28.12■■■□□ 2.09
RARA-202ENST00000394081 ZSCAN23Q3MJ62 389 aa28.11■■■□□ 2.09
RARA-202ENST00000394081 RBM42Q9BTD8 480 aaKnown RBP28.11■■■□□ 2.09
RARA-202ENST00000394081 CSPP1Q1MSJ5 1256 aa28.11■■■□□ 2.09
RARA-202ENST00000394081 LMBRD1Q9NUN5 540 aa28.11■■■□□ 2.09
RARA-202ENST00000394081 A0A1W2PP64 1363 aa28.09■■■□□ 2.09
RARA-202ENST00000394081 KIF24Q5T7B8 1368 aa28.08■■■□□ 2.09
RARA-202ENST00000394081 ZFYVE9O95405 1425 aa28.08■■■□□ 2.09
RARA-202ENST00000394081 FCHSD2O94868 740 aa28.07■■■□□ 2.08
RARA-202ENST00000394081 TMEM132EQ6IEE7 984 aa28.07■■■□□ 2.08
RARA-202ENST00000394081 ABCC4O15439 1325 aa28.07■■■□□ 2.08
RARA-202ENST00000394081 DIAPH1O60610 1272 aaKnown RBP28.06■■■□□ 2.08
RARA-202ENST00000394081 MCTP1Q6DN14 999 aa28.06■■■□□ 2.08
RARA-202ENST00000394081 KIDINS220Q9ULH0 1771 aa28.06■■■□□ 2.08
RARA-202ENST00000394081 CAVIN1Q6NZI2 390 aaKnown RBP28.06■■■□□ 2.08
RARA-202ENST00000394081 MRPL50Q8N5N7 158 aaKnown RBP28.06■■■□□ 2.08
RARA-202ENST00000394081 NPATQ14207 1427 aa28.05■■■□□ 2.08
RARA-202ENST00000394081 ZKSCAN5Q9Y2L8 839 aa28.04■■■□□ 2.08
RARA-202ENST00000394081 CHGAP10645 457 aaKnown RBP28.03■■■□□ 2.08
RARA-202ENST00000394081 SIRT2Q8IXJ6 389 aa28.03■■■□□ 2.08
RARA-202ENST00000394081 ATAD2Q6PL18 1390 aa28.03■■■□□ 2.08
RARA-202ENST00000394081 RBSNQ9H1K0 784 aa28.03■■■□□ 2.08
RARA-202ENST00000394081 YEATS2Q9ULM3 1422 aa28.03■■■□□ 2.08
RARA-202ENST00000394081 FAM135BQ49AJ0 1406 aa28.02■■■□□ 2.08
RARA-202ENST00000394081 DYNC1I1O14576 645 aa28.02■■■□□ 2.08
RARA-202ENST00000394081 VAMP4O75379 141 aa28.02■■■□□ 2.08
RARA-202ENST00000394081 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.02■■■□□ 2.08
RARA-202ENST00000394081 LRRC7Q96NW7 1537 aa28.02■■■□□ 2.08
RARA-202ENST00000394081 ASXL2Q76L83 1435 aa28.01■■■□□ 2.07
RARA-202ENST00000394081 USP26Q9BXU7 913 aa28.01■■■□□ 2.07
RARA-202ENST00000394081 PIK3C2BO00750 1634 aa28.01■■■□□ 2.07
RARA-202ENST00000394081 GSPT1P15170 499 aaKnown RBP28.01■■■□□ 2.07
RARA-202ENST00000394081 TERF2IPQ9NYB0 399 aa28.01■■■□□ 2.07
RARA-202ENST00000394081 R3HCC1Q9Y3T6 440 aaKnown RBP28.01■■■□□ 2.07
RARA-202ENST00000394081 PLEKHM2Q8IWE5 1019 aa28■■■□□ 2.07
RARA-202ENST00000394081 INTS3Q68E01 1043 aaKnown RBP27.99■■■□□ 2.07
RARA-202ENST00000394081 CABP2Q9NPB3 220 aa27.99■■■□□ 2.07
RARA-202ENST00000394081 CCDC39Q9UFE4 941 aa27.99■■■□□ 2.07
RARA-202ENST00000394081 CLTCQ00610 1675 aaKnown RBP27.99■■■□□ 2.07
RARA-202ENST00000394081 CAMSAP1Q5T5Y3 1602 aa27.99■■■□□ 2.07
RARA-202ENST00000394081 FYB1O15117 783 aa27.99■■■□□ 2.07
RARA-202ENST00000394081 VGFO15240 615 aaPredicted RBP27.99■■■□□ 2.07
RARA-202ENST00000394081 GGNBP2Q9H3C7 697 aa27.99■■■□□ 2.07
RARA-202ENST00000394081 AK9Q5TCS8 1911 aa27.98■■■□□ 2.07
RARA-202ENST00000394081 ST18O60284 1047 aa27.98■■■□□ 2.07
RARA-202ENST00000394081 TTC22Q5TAA0 569 aa27.98■■■□□ 2.07
RARA-202ENST00000394081 LRSAM1Q6UWE0 723 aa27.98■■■□□ 2.07
RARA-202ENST00000394081 PRIM1P49642 420 aaKnown RBP27.97■■■□□ 2.07
RARA-202ENST00000394081 API5Q9BZZ5 524 aaKnown RBP27.97■■■□□ 2.07
RARA-202ENST00000394081 FRMPD1Q5SYB0 1578 aa27.97■■■□□ 2.07
RARA-202ENST00000394081 NCLP19338 710 aaKnown RBP27.97■■■□□ 2.07
RARA-202ENST00000394081 DCTPP1Q9H773 170 aa27.97■■■□□ 2.07
RARA-202ENST00000394081 NEXMIFQ5QGS0 1516 aa27.96■■■□□ 2.07
RARA-202ENST00000394081 HECW2Q9P2P5 1572 aa27.96■■■□□ 2.07
RARA-202ENST00000394081 IFT57Q9NWB7 429 aa27.96■■■□□ 2.07
RARA-202ENST00000394081 GNAI1P63096 354 aa27.95■■■□□ 2.07
RARA-202ENST00000394081 C1orf115Q9H7X2 142 aa27.95■■■□□ 2.06
RARA-202ENST00000394081 UQCRHLA0A096LP55 91 aa27.94■■■□□ 2.06
RARA-202ENST00000394081 MBD3O95983 291 aa27.94■■■□□ 2.06
RARA-202ENST00000394081 UQCRHP07919 91 aa27.94■■■□□ 2.06
RARA-202ENST00000394081 CASC1Q6TDU7 716 aa27.94■■■□□ 2.06
RARA-202ENST00000394081 CD163L1Q9NR16 1453 aa27.94■■■□□ 2.06
RARA-202ENST00000394081 GPT2Q8TD30 523 aa27.93■■■□□ 2.06
RARA-202ENST00000394081 NFE2L2Q16236 605 aa27.93■■■□□ 2.06
RARA-202ENST00000394081 SASS6Q6UVJ0 657 aa27.93■■■□□ 2.06
RARA-202ENST00000394081 KIF20BQ96Q89 1820 aa27.92■■■□□ 2.06
RARA-202ENST00000394081 FAM13BQ9NYF5 915 aa27.92■■■□□ 2.06
RARA-202ENST00000394081 ZNF853P0CG23 659 aa27.92■■■□□ 2.06
RARA-202ENST00000394081 RBM10P98175 930 aaKnown RBP27.92■■■□□ 2.06
RARA-202ENST00000394081 PRPF40AO75400 957 aaKnown RBP27.91■■■□□ 2.06
RARA-202ENST00000394081 ABCC3O15438 1527 aa27.91■■■□□ 2.06
RARA-202ENST00000394081 XPCQ01831 940 aaPredicted RBP27.9■■■□□ 2.06
RARA-202ENST00000394081 SMAP1Q8IYB5 467 aaPredicted RBP27.89■■■□□ 2.06
RARA-202ENST00000394081 KNDC1Q76NI1 1749 aa27.89■■■□□ 2.06
RARA-202ENST00000394081 REC8O95072 547 aa27.89■■■□□ 2.05
RARA-202ENST00000394081 PRDM4Q9UKN5 801 aa27.89■■■□□ 2.05
RARA-202ENST00000394081 PRKAR2BP31323 418 aa27.88■■■□□ 2.05
RARA-202ENST00000394081 SRPK2P78362 688 aaKnown RBP27.88■■■□□ 2.05
RARA-202ENST00000394081 PKP1Q13835 747 aa27.88■■■□□ 2.05
RARA-202ENST00000394081 ZDHHC9Q9Y397 364 aa27.88■■■□□ 2.05
RARA-202ENST00000394081 TMEM63CQ9P1W3 806 aa27.86■■■□□ 2.05
RARA-202ENST00000394081 HDGFL2Q7Z4V5 671 aaPredicted RBP27.85■■■□□ 2.05
RARA-202ENST00000394081 MCM2P49736 904 aa27.84■■■□□ 2.05
RARA-202ENST00000394081 RPAP2Q8IXW5 612 aaPredicted RBP27.84■■■□□ 2.05
RARA-202ENST00000394081 TSPYL6Q8N831 410 aa27.84■■■□□ 2.05
RARA-202ENST00000394081 ANKRD44Q8N8A2 993 aa27.84■■■□□ 2.05
RARA-202ENST00000394081 PTPRMP28827 1452 aa27.84■■■□□ 2.05
RARA-202ENST00000394081 LMOD3Q0VAK6 560 aa27.84■■■□□ 2.05
RARA-202ENST00000394081 TWISTNBQ3B726 338 aaPredicted RBP27.84■■■□□ 2.05
RARA-202ENST00000394081 RBM27Q9P2N5 1060 aaKnown RBP27.83■■■□□ 2.04
RARA-202ENST00000394081 CFAP65Q6ZU64 1925 aaKnown RBP27.83■■■□□ 2.04
RARA-202ENST00000394081 ZGPATQ8N5A5 531 aaKnown RBP27.82■■■□□ 2.04
RARA-202ENST00000394081 MBIPQ9NS73 344 aa27.82■■■□□ 2.04
RARA-202ENST00000394081 SYCE3A1L190 88 aa27.81■■■□□ 2.04
RARA-202ENST00000394081 SYAP1Q96A49 352 aaPredicted RBP27.81■■■□□ 2.04
RARA-202ENST00000394081 ATP10DQ9P241 1426 aa27.81■■■□□ 2.04
RARA-202ENST00000394081 SDSP20132 328 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms