RNA–Protein interactions for RNA: ENST00000393436.9

RAP1B-204, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 2,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-204ENST00000393436 SOX12O15370 315 aa27.12■■□□□ 1.93
RAP1B-204ENST00000393436 MS4A1P11836 297 aa27.12■■□□□ 1.93
RAP1B-204ENST00000393436 MSH5O43196 834 aa27.11■■□□□ 1.93
RAP1B-204ENST00000393436 CLUAP1Q96AJ1 413 aa27.11■■□□□ 1.93
RAP1B-204ENST00000393436 THUMPD2Q9BTF0 503 aaKnown RBP27.11■■□□□ 1.93
RAP1B-204ENST00000393436 RGPD1P0DJD0 1748 aa27.09■■□□□ 1.93
RAP1B-204ENST00000393436 SMC4Q9NTJ3 1288 aa27.09■■□□□ 1.93
RAP1B-204ENST00000393436 HSP90AB2PQ58FF8 381 aa27.09■■□□□ 1.93
RAP1B-204ENST00000393436 AEBP1Q8IUX7 1158 aa27.08■■□□□ 1.93
RAP1B-204ENST00000393436 SSH1Q8WYL5 1049 aa27.08■■□□□ 1.93
RAP1B-204ENST00000393436 LAS1LQ9Y4W2 734 aaKnown RBP27.08■■□□□ 1.93
RAP1B-204ENST00000393436 ZKSCAN2Q63HK3 967 aa27.07■■□□□ 1.92
RAP1B-204ENST00000393436 MARF1Q9Y4F3 1742 aaKnown RBP27.07■■□□□ 1.92
RAP1B-204ENST00000393436 MAP3K19Q56UN5 1328 aa27.06■■□□□ 1.92
RAP1B-204ENST00000393436 PDE4AP27815 886 aa27.06■■□□□ 1.92
RAP1B-204ENST00000393436 SULT6B1Q6IMI4 303 aa27.06■■□□□ 1.92
RAP1B-204ENST00000393436 RBM33Q96EV2 1170 aaKnown RBP27.06■■□□□ 1.92
RAP1B-204ENST00000393436 IGHDP01880 384 aa27.06■■□□□ 1.92
RAP1B-204ENST00000393436 NPHP4O75161 1426 aaPredicted RBP27.04■■□□□ 1.92
RAP1B-204ENST00000393436 CALD1Q05682 793 aaKnown RBP27.04■■□□□ 1.92
RAP1B-204ENST00000393436 BACH2Q9BYV9 841 aa27.02■■□□□ 1.92
RAP1B-204ENST00000393436 LMOD3Q0VAK6 560 aa27.02■■□□□ 1.92
RAP1B-204ENST00000393436 USP54Q70EL1 1684 aa27.02■■□□□ 1.92
RAP1B-204ENST00000393436 SBNO1A3KN83 1393 aa27.01■■□□□ 1.92
RAP1B-204ENST00000393436 FAM83GA6ND36 823 aa27.01■■□□□ 1.91
RAP1B-204ENST00000393436 DZIP1LQ8IYY4 767 aaKnown RBP27.01■■□□□ 1.91
RAP1B-204ENST00000393436 IFT57Q9NWB7 429 aa27.01■■□□□ 1.91
RAP1B-204ENST00000393436 ZNF853P0CG23 659 aa27■■□□□ 1.91
RAP1B-204ENST00000393436 NLRP6P59044 892 aa27■■□□□ 1.91
RAP1B-204ENST00000393436 GNAI1P63096 354 aa27■■□□□ 1.91
RAP1B-204ENST00000393436 MVPQ14764 893 aaKnown RBP27■■□□□ 1.91
RAP1B-204ENST00000393436 FLT4P35916 1363 aa27■■□□□ 1.91
RAP1B-204ENST00000393436 AAMPQ13685 434 aa27■■□□□ 1.91
RAP1B-204ENST00000393436 FTSJ3Q8IY81 847 aaKnown RBP27■■□□□ 1.91
RAP1B-204ENST00000393436 TRIM27P14373 513 aa26.99■■□□□ 1.91
RAP1B-204ENST00000393436 NOB1Q9ULX3 412 aaKnown RBP26.99■■□□□ 1.91
RAP1B-204ENST00000393436 ADGRL3Q9HAR2 1447 aa26.99■■□□□ 1.91
RAP1B-204ENST00000393436 NUTM2GQ5VZR2 741 aa26.99■■□□□ 1.91
RAP1B-204ENST00000393436 DCTN1Q14203 1278 aa26.98■■□□□ 1.91
RAP1B-204ENST00000393436 MBIPQ9NS73 344 aa26.98■■□□□ 1.91
RAP1B-204ENST00000393436 PHF8Q9UPP1 1060 aa26.97■■□□□ 1.91
RAP1B-204ENST00000393436 ALDH1L2Q3SY69 923 aa26.97■■□□□ 1.91
RAP1B-204ENST00000393436 ATF7IPQ6VMQ6 1270 aa26.97■■□□□ 1.91
RAP1B-204ENST00000393436 PCDHB15Q9Y5E8 787 aa26.97■■□□□ 1.91
RAP1B-204ENST00000393436 ARHGEF10O15013 1369 aa26.96■■□□□ 1.91
RAP1B-204ENST00000393436 PAK3O75914 559 aaPredicted RBP26.95■■□□□ 1.9
RAP1B-204ENST00000393436 AMPHP49418 695 aa26.95■■□□□ 1.9
RAP1B-204ENST00000393436 CFAP44Q96MT7 982 aa26.95■■□□□ 1.9
RAP1B-204ENST00000393436 KIF16BQ96L93 1317 aa26.94■■□□□ 1.9
RAP1B-204ENST00000393436 TSPYL6Q8N831 410 aa26.94■■□□□ 1.9
RAP1B-204ENST00000393436 ABTB2Q8N961 1025 aa26.94■■□□□ 1.9
RAP1B-204ENST00000393436 VAMP4O75379 141 aa26.94■■□□□ 1.9
RAP1B-204ENST00000393436 RGS3P49796 1198 aa26.94■■□□□ 1.9
RAP1B-204ENST00000393436 ZNF428Q96B54 188 aa26.92■■□□□ 1.9
RAP1B-204ENST00000393436 ANP32AP39687 249 aaKnown RBP26.92■■□□□ 1.9
RAP1B-204ENST00000393436 NWD1Q149M9 1564 aa26.91■■□□□ 1.9
RAP1B-204ENST00000393436 ELL2O00472 640 aaPredicted RBP26.89■■□□□ 1.9
RAP1B-204ENST00000393436 IPO8O15397 1037 aaKnown RBP26.89■■□□□ 1.9
RAP1B-204ENST00000393436 C14orf37Q86TY3 774 aa26.89■■□□□ 1.9
RAP1B-204ENST00000393436 ITPRIPQ8IWB1 547 aa26.89■■□□□ 1.9
RAP1B-204ENST00000393436 EYA1Q99502 592 aa26.89■■□□□ 1.9
RAP1B-204ENST00000393436 BRPF1P55201 1214 aaPredicted RBP26.89■■□□□ 1.89
RAP1B-204ENST00000393436 ESCO1Q5FWF5 840 aa26.89■■□□□ 1.89
RAP1B-204ENST00000393436 IGSF1Q8N6C5 1336 aa26.88■■□□□ 1.89
RAP1B-204ENST00000393436 KDRP35968 1356 aa26.88■■□□□ 1.89
RAP1B-204ENST00000393436 HOXC9P31274 260 aa26.88■■□□□ 1.89
RAP1B-204ENST00000393436 TMEM57Q8N5G2 664 aa26.88■■□□□ 1.89
RAP1B-204ENST00000393436 C8orf58Q8NAV2 365 aa26.88■■□□□ 1.89
RAP1B-204ENST00000393436 TWISTNBQ3B726 338 aaPredicted RBP26.87■■□□□ 1.89
RAP1B-204ENST00000393436 MCM10Q7L590 875 aa26.87■■□□□ 1.89
RAP1B-204ENST00000393436 MRPL50Q8N5N7 158 aaKnown RBP26.87■■□□□ 1.89
RAP1B-204ENST00000393436 ANP32EQ9BTT0 268 aa26.87■■□□□ 1.89
RAP1B-204ENST00000393436 DDX19BQ9UMR2 479 aa26.87■■□□□ 1.89
RAP1B-204ENST00000393436 LTN1O94822 1766 aa26.87■■□□□ 1.89
RAP1B-204ENST00000393436 KIF24Q5T7B8 1368 aa26.86■■□□□ 1.89
RAP1B-204ENST00000393436 NPM2Q86SE8 214 aaKnown RBP26.86■■□□□ 1.89
RAP1B-204ENST00000393436 FOXO3O43524 673 aa26.83■■□□□ 1.89
RAP1B-204ENST00000393436 MTHFSDQ2M296 383 aaKnown RBP26.83■■□□□ 1.89
RAP1B-204ENST00000393436 RWDD1Q9H446 243 aaPredicted RBP26.83■■□□□ 1.89
RAP1B-204ENST00000393436 PSME1Q06323 249 aa26.83■■□□□ 1.89
RAP1B-204ENST00000393436 FAM161AQ3B820 660 aa26.82■■□□□ 1.88
RAP1B-204ENST00000393436 C8orf34Q49A92 452 aa26.82■■□□□ 1.88
RAP1B-204ENST00000393436 IPO9Q96P70 1041 aaKnown RBP26.82■■□□□ 1.88
RAP1B-204ENST00000393436 NFAT5O94916 1531 aa26.8■■□□□ 1.88
RAP1B-204ENST00000393436 CRB1P82279 1406 aa26.8■■□□□ 1.88
RAP1B-204ENST00000393436 CHL1O00533 1208 aa26.8■■□□□ 1.88
RAP1B-204ENST00000393436 ORAI2Q96SN7 254 aa26.8■■□□□ 1.88
RAP1B-204ENST00000393436 ERICH6Q7L0X2 663 aa26.79■■□□□ 1.88
RAP1B-204ENST00000393436 ARHGAP45Q92619 1136 aa26.78■■□□□ 1.88
RAP1B-204ENST00000393436 ZBTB40Q9NUA8 1239 aa26.78■■□□□ 1.88
RAP1B-204ENST00000393436 RTL1A6NKG5 1358 aa26.78■■□□□ 1.88
RAP1B-204ENST00000393436 PROSER2Q86WR7 435 aaPredicted RBP26.78■■□□□ 1.88
RAP1B-204ENST00000393436 LTV1Q96GA3 475 aaPredicted RBP26.78■■□□□ 1.88
RAP1B-204ENST00000393436 VIRMAQ69YN4 1812 aaKnown RBP26.78■■□□□ 1.88
RAP1B-204ENST00000393436 KRT24Q2M2I5 525 aa26.77■■□□□ 1.88
RAP1B-204ENST00000393436 PDZRN3Q9UPQ7 1066 aa26.77■■□□□ 1.88
RAP1B-204ENST00000393436 NOP58Q9Y2X3 529 aaKnown RBP26.77■■□□□ 1.88
RAP1B-204ENST00000393436 GAS2L2Q8NHY3 880 aa26.75■■□□□ 1.87
RAP1B-204ENST00000393436 RTF1Q92541 710 aaKnown RBP26.75■■□□□ 1.87
RAP1B-204ENST00000393436 XPCQ01831 940 aaPredicted RBP26.74■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms