RNA–Protein interactions for RNA: ENST00000393409.2

PLXNA1-201, Transcript of plexin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLXNA1, Length 9,066 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA1-201ENST00000393409 ZSCAN12O43309 604 aa15.4■□□□□ 0.06
PLXNA1-201ENST00000393409 SHTN1A0MZ66 631 aa15.4■□□□□ 0.06
PLXNA1-201ENST00000393409 NEMFO60524 1076 aa15.4■□□□□ 0.06
PLXNA1-201ENST00000393409 ATAD2BQ9ULI0 1458 aa15.4■□□□□ 0.06
PLXNA1-201ENST00000393409 NOB1Q9ULX3 412 aaKnown RBP15.4■□□□□ 0.06
PLXNA1-201ENST00000393409 PTPN14Q15678 1187 aa15.4■□□□□ 0.06
PLXNA1-201ENST00000393409 TOP2BQ02880 1626 aa15.39■□□□□ 0.05
PLXNA1-201ENST00000393409 NUTM2DQ5VT03 806 aaPredicted RBP15.39■□□□□ 0.05
PLXNA1-201ENST00000393409 CCDC102AQ96A19 550 aa15.39■□□□□ 0.05
PLXNA1-201ENST00000393409 PPP6R1Q9UPN7 881 aa15.39■□□□□ 0.05
PLXNA1-201ENST00000393409 DYDC1Q8WWB3 177 aa15.39■□□□□ 0.05
PLXNA1-201ENST00000393409 ATF7IPQ6VMQ6 1270 aa15.39■□□□□ 0.05
PLXNA1-201ENST00000393409 PRIMPOLQ96LW4 560 aa15.39■□□□□ 0.05
PLXNA1-201ENST00000393409 GAPVD1Q14C86 1478 aa15.39■□□□□ 0.05
PLXNA1-201ENST00000393409 FILIP1Q7Z7B0 1213 aa15.39■□□□□ 0.05
PLXNA1-201ENST00000393409 FGD5Q6ZNL6 1462 aa15.39■□□□□ 0.05
PLXNA1-201ENST00000393409 CDKL5O76039 1030 aa15.39■□□□□ 0.05
PLXNA1-201ENST00000393409 LARP1BQ659C4 914 aaKnown RBP15.39■□□□□ 0.05
PLXNA1-201ENST00000393409 FANCD2Q9BXW9 1451 aa15.38■□□□□ 0.05
PLXNA1-201ENST00000393409 DHX29Q7Z478 1369 aaKnown RBP15.38■□□□□ 0.05
PLXNA1-201ENST00000393409 KIAA1107Q9UPP5 1409 aa15.38■□□□□ 0.05
PLXNA1-201ENST00000393409 UPF3BQ9BZI7 483 aaKnown RBP15.38■□□□□ 0.05
PLXNA1-201ENST00000393409 MINK1Q8N4C8 1332 aaPredicted RBP15.38■□□□□ 0.05
PLXNA1-201ENST00000393409 MSH5O43196 834 aa15.38■□□□□ 0.05
PLXNA1-201ENST00000393409 CCDC148Q8NFR7 591 aa15.38■□□□□ 0.05
PLXNA1-201ENST00000393409 KRI1Q8N9T8 703 aaKnown RBP15.37■□□□□ 0.05
PLXNA1-201ENST00000393409 SFPQP23246 707 aaKnown RBP eCLIP15.37■□□□□ 0.05
PLXNA1-201ENST00000393409 ERBINQ96RT1 1412 aa15.37■□□□□ 0.05
PLXNA1-201ENST00000393409 ARHGAP5Q13017 1502 aa15.37■□□□□ 0.05
PLXNA1-201ENST00000393409 POTEB2H3BUK9 544 aa15.37■□□□□ 0.05
PLXNA1-201ENST00000393409 CRACR2AQ9BSW2 395 aa15.37■□□□□ 0.05
PLXNA1-201ENST00000393409 SEPT7Q16181 437 aaKnown RBP15.37■□□□□ 0.05
PLXNA1-201ENST00000393409 WASHC4Q2M389 1173 aa15.37■□□□□ 0.05
PLXNA1-201ENST00000393409 CDK5RAP3Q96JB5 506 aa15.36■□□□□ 0.05
PLXNA1-201ENST00000393409 JPH4Q96JJ6 628 aa15.36■□□□□ 0.05
PLXNA1-201ENST00000393409 ENOX2Q16206 610 aaKnown RBP15.36■□□□□ 0.05
PLXNA1-201ENST00000393409 ARAP1Q96P48 1450 aa15.36■□□□□ 0.05
PLXNA1-201ENST00000393409 CCAR1Q8IX12 1150 aaKnown RBP15.36■□□□□ 0.05
PLXNA1-201ENST00000393409 SLC3A2P08195 630 aaKnown RBP15.36■□□□□ 0.05
PLXNA1-201ENST00000393409 KRT32Q14532 448 aa15.36■□□□□ 0.05
PLXNA1-201ENST00000393409 PLCD4Q9BRC7 762 aa15.36■□□□□ 0.05
PLXNA1-201ENST00000393409 TBC1D2BQ9UPU7 963 aa15.36■□□□□ 0.05
PLXNA1-201ENST00000393409 CAVIN2O95810 425 aa15.35■□□□□ 0.05
PLXNA1-201ENST00000393409 SYCP1Q15431 976 aa15.35■□□□□ 0.05
PLXNA1-201ENST00000393409 OSCARQ8IYS5 282 aa15.35■□□□□ 0.05
PLXNA1-201ENST00000393409 PTPN23Q9H3S7 1636 aa15.35■□□□□ 0.05
PLXNA1-201ENST00000393409 BRPF1P55201 1214 aaPredicted RBP15.35■□□□□ 0.05
PLXNA1-201ENST00000393409 MICALCLQ6ZW33 695 aa15.35■□□□□ 0.05
PLXNA1-201ENST00000393409 SYNJ1O43426 1573 aa15.35■□□□□ 0.05
PLXNA1-201ENST00000393409 NECTIN2Q92692 538 aa15.35■□□□□ 0.05
PLXNA1-201ENST00000393409 PTPRGP23470 1445 aa15.35■□□□□ 0.05
PLXNA1-201ENST00000393409 HMGB2P26583 209 aaKnown RBP15.35■□□□□ 0.05
PLXNA1-201ENST00000393409 TRIM22Q8IYM9 498 aa15.35■□□□□ 0.05
PLXNA1-201ENST00000393409 MTHFSP49914 203 aa15.35■□□□□ 0.05
PLXNA1-201ENST00000393409 SLC26A8Q96RN1 970 aa15.35■□□□□ 0.05
PLXNA1-201ENST00000393409 SURF6O75683 361 aaKnown RBP15.35■□□□□ 0.05
PLXNA1-201ENST00000393409 ARHGAP29Q52LW3 1261 aa15.34■□□□□ 0.05
PLXNA1-201ENST00000393409 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.34■□□□□ 0.052e-6■■■■■ 29.9
PLXNA1-201ENST00000393409 EPB41L2O43491 1005 aaKnown RBP15.34■□□□□ 0.05
PLXNA1-201ENST00000393409 RBM33Q96EV2 1170 aaKnown RBP15.34■□□□□ 0.05
PLXNA1-201ENST00000393409 PAXBP1Q9Y5B6 917 aa15.34■□□□□ 0.05
PLXNA1-201ENST00000393409 CBX1P83916 185 aa15.34■□□□□ 0.05
PLXNA1-201ENST00000393409 RIC3Q7Z5B4 369 aa15.34■□□□□ 0.05
PLXNA1-201ENST00000393409 NEUROD6Q96NK8 337 aa15.34■□□□□ 0.05
PLXNA1-201ENST00000393409 TWISTNBQ3B726 338 aaPredicted RBP15.34■□□□□ 0.05
PLXNA1-201ENST00000393409 HMOX1P09601 288 aa15.33■□□□□ 0.05
PLXNA1-201ENST00000393409 GAS2L2Q8NHY3 880 aa15.33■□□□□ 0.05
PLXNA1-201ENST00000393409 BCAR3O75815 825 aa15.33■□□□□ 0.04
PLXNA1-201ENST00000393409 CEBPZQ03701 1054 aaKnown RBP15.33■□□□□ 0.04
PLXNA1-201ENST00000393409 SCAND2PQ9GZW5 306 aaPredicted RBP15.33■□□□□ 0.04
PLXNA1-201ENST00000393409 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.33■□□□□ 0.043e-6■■■■□ 21.8
PLXNA1-201ENST00000393409 CENPHQ9H3R5 247 aa15.33■□□□□ 0.04
PLXNA1-201ENST00000393409 EZRP15311 586 aaKnown RBP15.33■□□□□ 0.04
PLXNA1-201ENST00000393409 CASQ1P31415 396 aa15.33■□□□□ 0.04
PLXNA1-201ENST00000393409 GBP2P32456 591 aaPredicted RBP15.33■□□□□ 0.04
PLXNA1-201ENST00000393409 SKIDA1Q1XH10 827 aa15.33■□□□□ 0.04
PLXNA1-201ENST00000393409 CTAGE5O15320 804 aa15.33■□□□□ 0.04
PLXNA1-201ENST00000393409 GSDMDP57764 484 aa15.33■□□□□ 0.04
PLXNA1-201ENST00000393409 CFTRP13569 1480 aa15.32■□□□□ 0.04
PLXNA1-201ENST00000393409 ZFYVE27Q5T4F4 411 aa15.32■□□□□ 0.04
PLXNA1-201ENST00000393409 KIF5CO60282 957 aa15.32■□□□□ 0.04
PLXNA1-201ENST00000393409 TIGD1Q96MW7 591 aa15.32■□□□□ 0.04
PLXNA1-201ENST00000393409 PSME1Q06323 249 aa15.31■□□□□ 0.04
PLXNA1-201ENST00000393409 IMMTQ16891 758 aaKnown RBP15.31■□□□□ 0.04
PLXNA1-201ENST00000393409 ZNF397Q8NF99 534 aaPredicted RBP15.31■□□□□ 0.04
PLXNA1-201ENST00000393409 PDRG1Q9NUG6 133 aa15.31■□□□□ 0.04
PLXNA1-201ENST00000393409 FAM177A1Q8N128 213 aaPredicted RBP15.31■□□□□ 0.04
PLXNA1-201ENST00000393409 GOLGA6L9A6NEM1 432 aa15.31■□□□□ 0.04
PLXNA1-201ENST00000393409 PPP4R3BQ5MIZ7 849 aa15.31■□□□□ 0.04
PLXNA1-201ENST00000393409 CLCN1P35523 988 aa15.31■□□□□ 0.04
PLXNA1-201ENST00000393409 EXOSC9Q06265 439 aaKnown RBP15.31■□□□□ 0.04
PLXNA1-201ENST00000393409 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.31■□□□□ 0.042e-6■■■■■ 150.2
PLXNA1-201ENST00000393409 GOLGA6L10A0A0M3HER8 536 aa15.3■□□□□ 0.04
PLXNA1-201ENST00000393409 FAM193AP78312 1265 aa15.3■□□□□ 0.04
PLXNA1-201ENST00000393409 ATF3P18847 181 aa15.3■□□□□ 0.04
PLXNA1-201ENST00000393409 DNAJC2Q99543 621 aaKnown RBP15.3■□□□□ 0.04
PLXNA1-201ENST00000393409 LRRFIP2Q9Y608 721 aaKnown RBP15.3■□□□□ 0.04
PLXNA1-201ENST00000393409 BLOC1S2Q6QNY1 142 aa15.3■□□□□ 0.04
PLXNA1-201ENST00000393409 SH2B1Q9NRF2 756 aaPredicted RBP15.3■□□□□ 0.04
PLXNA1-201ENST00000393409 KIAA1328Q86T90 577 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms