RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 FTSJ3Q8IY81 847 aaKnown RBP32.82■■■□□ 2.84
SMARCD3-203ENST00000392811 PCDHB15Q9Y5E8 787 aa32.82■■■□□ 2.84
SMARCD3-203ENST00000392811 PAK3O75914 559 aaPredicted RBP32.81■■■□□ 2.84
SMARCD3-203ENST00000392811 PMFBP1Q8TBY8 1022 aa32.81■■■□□ 2.84
SMARCD3-203ENST00000392811 THUMPD2Q9BTF0 503 aaKnown RBP32.81■■■□□ 2.84
SMARCD3-203ENST00000392811 LAS1LQ9Y4W2 734 aaKnown RBP32.8■■■□□ 2.84
SMARCD3-203ENST00000392811 TRIM27P14373 513 aa32.8■■■□□ 2.84
SMARCD3-203ENST00000392811 CALD1Q05682 793 aaKnown RBP32.8■■■□□ 2.84
SMARCD3-203ENST00000392811 RGPD8O14715 1765 aaPredicted RBP32.79■■■□□ 2.84
SMARCD3-203ENST00000392811 RIMS1Q86UR5 1692 aaKnown RBP32.79■■■□□ 2.84
SMARCD3-203ENST00000392811 USP31Q70CQ4 1352 aa32.79■■■□□ 2.84
SMARCD3-203ENST00000392811 EIF4A2Q14240 407 aaKnown RBP32.78■■■□□ 2.84
SMARCD3-203ENST00000392811 FAM161AQ3B820 660 aa32.78■■■□□ 2.84
SMARCD3-203ENST00000392811 DLG5Q8TDM6 1919 aa32.78■■■□□ 2.84
SMARCD3-203ENST00000392811 NOB1Q9ULX3 412 aaKnown RBP32.77■■■□□ 2.84
SMARCD3-203ENST00000392811 PEAK1Q9H792 1746 aa32.77■■■□□ 2.84
SMARCD3-203ENST00000392811 ATF7IPQ6VMQ6 1270 aa32.77■■■□□ 2.84
SMARCD3-203ENST00000392811 TTC21AQ8NDW8 1320 aa32.77■■■□□ 2.84
SMARCD3-203ENST00000392811 C8orf34Q49A92 452 aa32.76■■■□□ 2.83
SMARCD3-203ENST00000392811 KCNA6P17658 529 aa32.75■■■□□ 2.83
SMARCD3-203ENST00000392811 ZBTB47Q9UFB7 747 aaPredicted RBP32.75■■■□□ 2.83
SMARCD3-203ENST00000392811 ALDH1L2Q3SY69 923 aa32.75■■■□□ 2.83
SMARCD3-203ENST00000392811 IFT57Q9NWB7 429 aa32.75■■■□□ 2.83
SMARCD3-203ENST00000392811 LMOD3Q0VAK6 560 aa32.74■■■□□ 2.83
SMARCD3-203ENST00000392811 PIK3R4Q99570 1358 aa32.74■■■□□ 2.83
SMARCD3-203ENST00000392811 GNAI1P63096 354 aa32.73■■■□□ 2.83
SMARCD3-203ENST00000392811 NGDNQ8NEJ9 315 aaKnown RBP32.73■■■□□ 2.83
SMARCD3-203ENST00000392811 KIF16BQ96L93 1317 aa32.73■■■□□ 2.83
SMARCD3-203ENST00000392811 ZNF853P0CG23 659 aa32.72■■■□□ 2.83
SMARCD3-203ENST00000392811 AEBP1Q8IUX7 1158 aa32.72■■■□□ 2.83
SMARCD3-203ENST00000392811 HSP90AB2PQ58FF8 381 aa32.7■■■□□ 2.83
SMARCD3-203ENST00000392811 SULT6B1Q6IMI4 303 aa32.7■■■□□ 2.83
SMARCD3-203ENST00000392811 ZNF428Q96B54 188 aa32.7■■■□□ 2.83
SMARCD3-203ENST00000392811 ANKARQ7Z5J8 1434 aa32.69■■■□□ 2.82
SMARCD3-203ENST00000392811 SOX12O15370 315 aa32.69■■■□□ 2.82
SMARCD3-203ENST00000392811 IPO8O15397 1037 aaKnown RBP32.69■■■□□ 2.82
SMARCD3-203ENST00000392811 RWDD1Q9H446 243 aaPredicted RBP32.69■■■□□ 2.82
SMARCD3-203ENST00000392811 MBIPQ9NS73 344 aa32.68■■■□□ 2.82
SMARCD3-203ENST00000392811 RGPD1P0DJD0 1748 aa32.68■■■□□ 2.82
SMARCD3-203ENST00000392811 ITPRIPQ8IWB1 547 aa32.68■■■□□ 2.82
SMARCD3-203ENST00000392811 DDX19BQ9UMR2 479 aa32.68■■■□□ 2.82
SMARCD3-203ENST00000392811 FAM83GA6ND36 823 aa32.67■■■□□ 2.82
SMARCD3-203ENST00000392811 VAMP4O75379 141 aa32.67■■■□□ 2.82
SMARCD3-203ENST00000392811 FMN2Q9NZ56 1722 aa32.66■■■□□ 2.82
SMARCD3-203ENST00000392811 BRPF1P55201 1214 aaPredicted RBP32.66■■■□□ 2.82
SMARCD3-203ENST00000392811 CFAP44Q96MT7 982 aa32.66■■■□□ 2.82
SMARCD3-203ENST00000392811 PIK3C2AO00443 1686 aa32.65■■■□□ 2.82
SMARCD3-203ENST00000392811 TMEM57Q8N5G2 664 aa32.65■■■□□ 2.82
SMARCD3-203ENST00000392811 MAP3K19Q56UN5 1328 aa32.65■■■□□ 2.82
SMARCD3-203ENST00000392811 TSPYL6Q8N831 410 aa32.65■■■□□ 2.82
SMARCD3-203ENST00000392811 ZNF142P52746 1687 aaPredicted RBP32.64■■■□□ 2.82
SMARCD3-203ENST00000392811 DCTN1Q14203 1278 aa32.63■■■□□ 2.81
SMARCD3-203ENST00000392811 ANKLE2Q86XL3 938 aa32.63■■■□□ 2.81
SMARCD3-203ENST00000392811 PDZRN3Q9UPQ7 1066 aa32.61■■■□□ 2.81
SMARCD3-203ENST00000392811 CHD2O14647 1828 aaKnown RBP32.6■■■□□ 2.81
SMARCD3-203ENST00000392811 MRPL50Q8N5N7 158 aaKnown RBP32.6■■■□□ 2.81
SMARCD3-203ENST00000392811 SBNO1A3KN83 1393 aa32.6■■■□□ 2.81
SMARCD3-203ENST00000392811 VIRMAQ69YN4 1812 aaKnown RBP32.6■■■□□ 2.81
SMARCD3-203ENST00000392811 ADAMTSL3P82987 1691 aa32.59■■■□□ 2.81
SMARCD3-203ENST00000392811 FLT4P35916 1363 aa32.58■■■□□ 2.81
SMARCD3-203ENST00000392811 ELL2O00472 640 aaPredicted RBP32.58■■■□□ 2.81
SMARCD3-203ENST00000392811 ARHGEF10O15013 1369 aa32.57■■■□□ 2.8
SMARCD3-203ENST00000392811 TWISTNBQ3B726 338 aaPredicted RBP32.57■■■□□ 2.8
SMARCD3-203ENST00000392811 C8orf58Q8NAV2 365 aa32.56■■■□□ 2.8
SMARCD3-203ENST00000392811 ZBTB40Q9NUA8 1239 aa32.56■■■□□ 2.8
SMARCD3-203ENST00000392811 HDAC1Q13547 482 aaPredicted RBP32.55■■■□□ 2.8
SMARCD3-203ENST00000392811 DDRGK1Q96HY6 314 aa32.55■■■□□ 2.8
SMARCD3-203ENST00000392811 NLRP6P59044 892 aa32.54■■■□□ 2.8
SMARCD3-203ENST00000392811 ARHGAP45Q92619 1136 aa32.54■■■□□ 2.8
SMARCD3-203ENST00000392811 MARF1Q9Y4F3 1742 aaKnown RBP32.53■■■□□ 2.8
SMARCD3-203ENST00000392811 AMPHP49418 695 aa32.52■■■□□ 2.8
SMARCD3-203ENST00000392811 USP54Q70EL1 1684 aa32.5■■■□□ 2.79
SMARCD3-203ENST00000392811 MCM10Q7L590 875 aa32.5■■■□□ 2.79
SMARCD3-203ENST00000392811 NUTM2GQ5VZR2 741 aa32.48■■■□□ 2.79
SMARCD3-203ENST00000392811 KDRP35968 1356 aa32.47■■■□□ 2.79
SMARCD3-203ENST00000392811 CHL1O00533 1208 aa32.46■■■□□ 2.79
SMARCD3-203ENST00000392811 RBM33Q96EV2 1170 aaKnown RBP32.46■■■□□ 2.79
SMARCD3-203ENST00000392811 EYA1Q99502 592 aa32.46■■■□□ 2.79
SMARCD3-203ENST00000392811 SETD1BQ9UPS6 1966 aaKnown RBP32.46■■■□□ 2.79
SMARCD3-203ENST00000392811 IGSF1Q8N6C5 1336 aa32.46■■■□□ 2.79
SMARCD3-203ENST00000392811 ABTB2Q8N961 1025 aa32.45■■■□□ 2.79
SMARCD3-203ENST00000392811 PHF8Q9UPP1 1060 aa32.45■■■□□ 2.79
SMARCD3-203ENST00000392811 ABCC4O15439 1325 aa32.44■■■□□ 2.78
SMARCD3-203ENST00000392811 SMC5Q8IY18 1101 aa32.43■■■□□ 2.78
SMARCD3-203ENST00000392811 KIF24Q5T7B8 1368 aa32.43■■■□□ 2.78
SMARCD3-203ENST00000392811 MTHFSDQ2M296 383 aaKnown RBP32.43■■■□□ 2.78
SMARCD3-203ENST00000392811 CRB1P82279 1406 aa32.42■■■□□ 2.78
SMARCD3-203ENST00000392811 ZBTB7BO15156 539 aaPredicted RBP32.42■■■□□ 2.78
SMARCD3-203ENST00000392811 FOXO3O43524 673 aa32.41■■■□□ 2.78
SMARCD3-203ENST00000392811 HOXC9P31274 260 aa32.41■■■□□ 2.78
SMARCD3-203ENST00000392811 ADGRL3Q9HAR2 1447 aa32.4■■■□□ 2.78
SMARCD3-203ENST00000392811 SEC24BO95487 1268 aa32.39■■■□□ 2.78
SMARCD3-203ENST00000392811 KRT24Q2M2I5 525 aa32.39■■■□□ 2.78
SMARCD3-203ENST00000392811 API5Q9BZZ5 524 aaKnown RBP32.39■■■□□ 2.78
SMARCD3-203ENST00000392811 CHMP4BQ9H444 224 aaKnown RBP32.39■■■□□ 2.78
SMARCD3-203ENST00000392811 NPHP4O75161 1426 aaPredicted RBP32.39■■■□□ 2.78
SMARCD3-203ENST00000392811 KIAA0232Q92628 1395 aa32.39■■■□□ 2.77
SMARCD3-203ENST00000392811 USP19O94966 1318 aa32.38■■■□□ 2.77
SMARCD3-203ENST00000392811 NBR1Q14596 966 aa32.38■■■□□ 2.77
SMARCD3-203ENST00000392811 C14orf37Q86TY3 774 aa32.36■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms