RNA–Protein interactions for RNA: ENST00000392502.8

TRA2A-202, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-202ENST00000392502 CBX1P83916 185 aa20.15■□□□□ 0.82
TRA2A-202ENST00000392502 CCDC39Q9UFE4 941 aa20.15■□□□□ 0.82
TRA2A-202ENST00000392502 SEC24BO95487 1268 aa20.14■□□□□ 0.81
TRA2A-202ENST00000392502 GABPB1Q06547 395 aaPredicted RBP20.14■□□□□ 0.81
TRA2A-202ENST00000392502 FEZ1Q99689 392 aa20.14■□□□□ 0.81
TRA2A-202ENST00000392502 CGNQ9P2M7 1197 aaKnown RBP20.14■□□□□ 0.81
TRA2A-202ENST00000392502 XPCQ01831 940 aaPredicted RBP20.14■□□□□ 0.81
TRA2A-202ENST00000392502 GOLGA6L22H0YM25 854 aa20.13■□□□□ 0.81
TRA2A-202ENST00000392502 DDIT3P35638 169 aa20.13■□□□□ 0.81
TRA2A-202ENST00000392502 MTHFSP49914 203 aa20.13■□□□□ 0.81
TRA2A-202ENST00000392502 CGNL1Q0VF96 1302 aa20.13■□□□□ 0.81
TRA2A-202ENST00000392502 ZNF445P59923 1031 aa20.12■□□□□ 0.81
TRA2A-202ENST00000392502 ZNF692Q9BU19 519 aaPredicted RBP20.12■□□□□ 0.81
TRA2A-202ENST00000392502 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.12■□□□□ 0.81
TRA2A-202ENST00000392502 ANKRD36BQ8N2N9 1353 aa20.12■□□□□ 0.81
TRA2A-202ENST00000392502 MMP14P50281 582 aa20.12■□□□□ 0.81
TRA2A-202ENST00000392502 IRX5P78411 483 aaPredicted RBP20.12■□□□□ 0.81
TRA2A-202ENST00000392502 RRP7AQ9Y3A4 280 aaKnown RBP20.12■□□□□ 0.81
TRA2A-202ENST00000392502 BCAR3O75815 825 aa20.11■□□□□ 0.81
TRA2A-202ENST00000392502 YY1AP1Q9H869 796 aa20.11■□□□□ 0.81
TRA2A-202ENST00000392502 NKTRP30414 1462 aaKnown RBP20.11■□□□□ 0.81
TRA2A-202ENST00000392502 CLTCQ00610 1675 aaKnown RBP20.11■□□□□ 0.81
TRA2A-202ENST00000392502 NEUROD2Q15784 382 aa20.11■□□□□ 0.81
TRA2A-202ENST00000392502 HSCBQ8IWL3 235 aa20.11■□□□□ 0.81
TRA2A-202ENST00000392502 ARID3AQ99856 593 aa20.11■□□□□ 0.81
TRA2A-202ENST00000392502 NGEFQ8N5V2 710 aa20.1■□□□□ 0.81
TRA2A-202ENST00000392502 PTPRMP28827 1452 aa20.1■□□□□ 0.81
TRA2A-202ENST00000392502 MINK1Q8N4C8 1332 aaPredicted RBP20.1■□□□□ 0.81
TRA2A-202ENST00000392502 E9PSI1 815 aa20.1■□□□□ 0.81
TRA2A-202ENST00000392502 FAM193AP78312 1265 aa20.1■□□□□ 0.81
TRA2A-202ENST00000392502 KLHL40Q2TBA0 621 aa20.1■□□□□ 0.81
TRA2A-202ENST00000392502 WWC1Q8IX03 1113 aa20.1■□□□□ 0.81
TRA2A-202ENST00000392502 PRAM1Q96QH2 718 aa20.09■□□□□ 0.81
TRA2A-202ENST00000392502 SPATA31D1Q6ZQQ2 1576 aa20.09■□□□□ 0.81
TRA2A-202ENST00000392502 CLGNO14967 610 aa20.08■□□□□ 0.81
TRA2A-202ENST00000392502 SRPK2P78362 688 aaKnown RBP20.08■□□□□ 0.81
TRA2A-202ENST00000392502 CLEC17AQ6ZS10 378 aa20.08■□□□□ 0.81
TRA2A-202ENST00000392502 A0A1W2PP64 1363 aa20.08■□□□□ 0.81
TRA2A-202ENST00000392502 ZNF771Q7L3S4 317 aaPredicted RBP20.08■□□□□ 0.8
TRA2A-202ENST00000392502 RNF216Q9NWF9 866 aaPredicted RBP20.08■□□□□ 0.8
TRA2A-202ENST00000392502 RAB3GAP1Q15042 981 aa20.07■□□□□ 0.8
TRA2A-202ENST00000392502 KIF3AQ9Y496 699 aa20.07■□□□□ 0.8
TRA2A-202ENST00000392502 AXDND1Q5T1B0 1012 aaPredicted RBP20.07■□□□□ 0.8
TRA2A-202ENST00000392502 YTHDC2Q9H6S0 1430 aaKnown RBP20.07■□□□□ 0.8
TRA2A-202ENST00000392502 SMC5Q8IY18 1101 aa20.06■□□□□ 0.8
TRA2A-202ENST00000392502 NSD2O96028 1365 aa20.06■□□□□ 0.8
TRA2A-202ENST00000392502 MLECQ14165 292 aa20.06■□□□□ 0.8
TRA2A-202ENST00000392502 TCP11L2Q8N4U5 519 aa20.06■□□□□ 0.8
TRA2A-202ENST00000392502 TNPO1Q92973 898 aaKnown RBP20.06■□□□□ 0.8
TRA2A-202ENST00000392502 SNX21Q969T3 373 aa20.06■□□□□ 0.8
TRA2A-202ENST00000392502 RUNDC1Q96C34 613 aa20.06■□□□□ 0.8
TRA2A-202ENST00000392502 TIGD1Q96MW7 591 aa20.06■□□□□ 0.8
TRA2A-202ENST00000392502 IQSEC2Q5JU85 1478 aa20.05■□□□□ 0.8
TRA2A-202ENST00000392502 ATP2B3Q16720 1220 aa20.05■□□□□ 0.8
TRA2A-202ENST00000392502 ZNF710Q8N1W2 664 aa20.05■□□□□ 0.8
TRA2A-202ENST00000392502 KIAA2012Q0VF49 1180 aa20.04■□□□□ 0.8
TRA2A-202ENST00000392502 ALKQ9UM73 1620 aa20.04■□□□□ 0.8
TRA2A-202ENST00000392502 GGNBP2Q9H3C7 697 aa20.04■□□□□ 0.8
TRA2A-202ENST00000392502 STAG3Q9UJ98 1225 aa20.04■□□□□ 0.8
TRA2A-202ENST00000392502 OGFRQ9NZT2 677 aa20.03■□□□□ 0.8
TRA2A-202ENST00000392502 CREBRFQ8IUR6 639 aa20.03■□□□□ 0.8
TRA2A-202ENST00000392502 ANKRD26Q9UPS8 1709 aa20.03■□□□□ 0.8
TRA2A-202ENST00000392502 PDCL2Q8N4E4 241 aa20.02■□□□□ 0.8
TRA2A-202ENST00000392502 ABCC11Q96J66 1382 aa20.02■□□□□ 0.79
TRA2A-202ENST00000392502 KCNJ4P48050 445 aa20.02■□□□□ 0.79
TRA2A-202ENST00000392502 CALCOCO1Q9P1Z2 691 aa20.02■□□□□ 0.79
TRA2A-202ENST00000392502 CD163L1Q9NR16 1453 aa20.01■□□□□ 0.79
TRA2A-202ENST00000392502 CFAP53Q96M91 514 aa20.01■□□□□ 0.79
TRA2A-202ENST00000392502 CHMP4AQ9BY43 222 aa20.01■□□□□ 0.79
TRA2A-202ENST00000392502 GEMIN8Q9NWZ8 242 aaKnown RBP20.01■□□□□ 0.79
TRA2A-202ENST00000392502 DLC1Q96QB1 1528 aa20.01■□□□□ 0.79
TRA2A-202ENST00000392502 TULP2O00295 520 aa20■□□□□ 0.79
TRA2A-202ENST00000392502 C22orf23Q9BZE7 217 aa20■□□□□ 0.79
TRA2A-202ENST00000392502 PHF23Q9BUL5 403 aaPredicted RBP20■□□□□ 0.79
TRA2A-202ENST00000392502 PMFBP1Q8TBY8 1022 aa19.99■□□□□ 0.79
TRA2A-202ENST00000392502 U2AF1L5P0DN76 240 aaPredicted RBP19.99■□□□□ 0.79
TRA2A-202ENST00000392502 U2AF1Q01081 240 aaKnown RBP eCLIP19.99■□□□□ 0.791e-7■■■□□ 15.2
TRA2A-202ENST00000392502 PDE3AQ14432 1141 aa19.99■□□□□ 0.79
TRA2A-202ENST00000392502 EFCC1Q9HA90 598 aa19.99■□□□□ 0.79
TRA2A-202ENST00000392502 SETD1AO15047 1707 aaKnown RBP19.98■□□□□ 0.79
TRA2A-202ENST00000392502 A2ML1A8K2U0 1454 aa19.98■□□□□ 0.79
TRA2A-202ENST00000392502 CDK19Q9BWU1 502 aa19.98■□□□□ 0.79
TRA2A-202ENST00000392502 FYB1O15117 783 aa19.98■□□□□ 0.79
TRA2A-202ENST00000392502 WAPLQ7Z5K2 1190 aa19.98■□□□□ 0.79
TRA2A-202ENST00000392502 SPRYD3Q8NCJ5 442 aa19.97■□□□□ 0.79
TRA2A-202ENST00000392502 ATAD2Q6PL18 1390 aa19.97■□□□□ 0.79
TRA2A-202ENST00000392502 IGHDP01880 384 aa19.96■□□□□ 0.79
TRA2A-202ENST00000392502 ZNF622Q969S3 477 aaKnown RBP eCLIP19.95■□□□□ 0.785e-11■■□□□ 13.7
TRA2A-202ENST00000392502 CABP1Q9NZU7 370 aa19.95■□□□□ 0.78
TRA2A-202ENST00000392502 PANK1Q8TE04 598 aa19.95■□□□□ 0.78
TRA2A-202ENST00000392502 DDX49Q9Y6V7 483 aaKnown RBP19.95■□□□□ 0.78
TRA2A-202ENST00000392502 MED14O60244 1454 aa19.95■□□□□ 0.78
TRA2A-202ENST00000392502 RIMS2Q9UQ26 1411 aa19.94■□□□□ 0.78
TRA2A-202ENST00000392502 ANKRD7Q92527 254 aa19.94■□□□□ 0.78
TRA2A-202ENST00000392502 ZBTB22O15209 634 aa19.94■□□□□ 0.78
TRA2A-202ENST00000392502 DHX37Q8IY37 1157 aaKnown RBP19.94■□□□□ 0.78
TRA2A-202ENST00000392502 TERF2IPQ9NYB0 399 aa19.94■□□□□ 0.78
TRA2A-202ENST00000392502 CLUAP1Q96AJ1 413 aa19.93■□□□□ 0.78
TRA2A-202ENST00000392502 DIAPH3Q9NSV4 1193 aa19.93■□□□□ 0.78
TRA2A-202ENST00000392502 TNNQ9UQP3 1299 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms