RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 KIF1AQ12756 1690 aa27.8■■■□□ 2.04
SPHK1-202ENST00000392496 DCCP43146 1447 aa27.8■■■□□ 2.04
SPHK1-202ENST00000392496 LTBP4Q8N2S1 1624 aa27.8■■■□□ 2.04
SPHK1-202ENST00000392496 MSH6P52701 1360 aa27.8■■■□□ 2.04
SPHK1-202ENST00000392496 NFE2L2Q16236 605 aa27.79■■■□□ 2.04
SPHK1-202ENST00000392496 HSP90AB2PQ58FF8 381 aa27.79■■■□□ 2.04
SPHK1-202ENST00000392496 C1orf167Q5SNV9 1468 aa27.79■■■□□ 2.04
SPHK1-202ENST00000392496 SOX12O15370 315 aa27.78■■■□□ 2.04
SPHK1-202ENST00000392496 PLIN1O60240 522 aa27.78■■■□□ 2.04
SPHK1-202ENST00000392496 B4GALNT3Q6L9W6 998 aa27.78■■■□□ 2.04
SPHK1-202ENST00000392496 PHACTR3Q96KR7 559 aa27.77■■■□□ 2.04
SPHK1-202ENST00000392496 ORAI2Q96SN7 254 aa27.77■■■□□ 2.04
SPHK1-202ENST00000392496 ATF3P18847 181 aa27.76■■■□□ 2.03
SPHK1-202ENST00000392496 AMPHP49418 695 aa27.75■■■□□ 2.03
SPHK1-202ENST00000392496 EXOC6Q8TAG9 804 aa27.75■■■□□ 2.03
SPHK1-202ENST00000392496 NUTM2GQ5VZR2 741 aa27.74■■■□□ 2.03
SPHK1-202ENST00000392496 ARHGEF10O15013 1369 aa27.74■■■□□ 2.03
SPHK1-202ENST00000392496 CADPS2Q86UW7 1296 aa27.73■■■□□ 2.03
SPHK1-202ENST00000392496 MST1RQ04912 1400 aa27.72■■■□□ 2.03
SPHK1-202ENST00000392496 CT47B1P0C2W7 299 aaPredicted RBP27.71■■■□□ 2.03
SPHK1-202ENST00000392496 SULT6B1Q6IMI4 303 aa27.71■■■□□ 2.03
SPHK1-202ENST00000392496 CCDC136Q96JN2 1154 aa27.71■■■□□ 2.03
SPHK1-202ENST00000392496 TRPM3Q9HCF6 1732 aaPredicted RBP27.7■■■□□ 2.03
SPHK1-202ENST00000392496 FANCIQ9NVI1 1328 aa27.7■■■□□ 2.03
SPHK1-202ENST00000392496 RTL1A6NKG5 1358 aa27.7■■■□□ 2.03
SPHK1-202ENST00000392496 FOXO3O43524 673 aa27.7■■■□□ 2.02
SPHK1-202ENST00000392496 NFAT5O94916 1531 aa27.69■■■□□ 2.02
SPHK1-202ENST00000392496 CALD1Q05682 793 aaKnown RBP27.69■■■□□ 2.02
SPHK1-202ENST00000392496 LMOD3Q0VAK6 560 aa27.69■■■□□ 2.02
SPHK1-202ENST00000392496 CERKQ8TCT0 537 aa27.69■■■□□ 2.02
SPHK1-202ENST00000392496 DLG5Q8TDM6 1919 aa27.69■■■□□ 2.02
SPHK1-202ENST00000392496 BCAR3O75815 825 aa27.68■■■□□ 2.02
SPHK1-202ENST00000392496 HOXC9P31274 260 aa27.68■■■□□ 2.02
SPHK1-202ENST00000392496 AEBP1Q8IUX7 1158 aa27.68■■■□□ 2.02
SPHK1-202ENST00000392496 KCNH5Q8NCM2 988 aa27.68■■■□□ 2.02
SPHK1-202ENST00000392496 CRBNQ96SW2 442 aa27.68■■■□□ 2.02
SPHK1-202ENST00000392496 LTN1O94822 1766 aa27.67■■■□□ 2.02
SPHK1-202ENST00000392496 RARSP54136 660 aaKnown RBP27.66■■■□□ 2.02
SPHK1-202ENST00000392496 KDRP35968 1356 aa27.66■■■□□ 2.02
SPHK1-202ENST00000392496 C20orf194Q5TEA3 1177 aa27.65■■■□□ 2.02
SPHK1-202ENST00000392496 KRT28Q7Z3Y7 464 aa27.65■■■□□ 2.02
SPHK1-202ENST00000392496 IGSF1Q8N6C5 1336 aa27.65■■■□□ 2.02
SPHK1-202ENST00000392496 XIRP1Q702N8 1843 aaKnown RBP27.65■■■□□ 2.02
SPHK1-202ENST00000392496 PHRF1Q9P1Y6 1649 aaKnown RBP27.64■■■□□ 2.02
SPHK1-202ENST00000392496 SLIT3O75094 1523 aa27.64■■■□□ 2.02
SPHK1-202ENST00000392496 TOM1O60784 492 aa27.64■■■□□ 2.02
SPHK1-202ENST00000392496 TSR2Q969E8 191 aaKnown RBP27.64■■■□□ 2.02
SPHK1-202ENST00000392496 EXOSC9Q06265 439 aaKnown RBP27.61■■■□□ 2.01
SPHK1-202ENST00000392496 EYA1Q99502 592 aa27.61■■■□□ 2.01
SPHK1-202ENST00000392496 XPCQ01831 940 aaPredicted RBP27.6■■■□□ 2.01
SPHK1-202ENST00000392496 IP6K1Q92551 441 aa27.6■■■□□ 2.01
SPHK1-202ENST00000392496 PDE3AQ14432 1141 aa27.6■■■□□ 2.01
SPHK1-202ENST00000392496 IFT57Q9NWB7 429 aa27.6■■■□□ 2.01
SPHK1-202ENST00000392496 USP19O94966 1318 aa27.59■■■□□ 2.01
SPHK1-202ENST00000392496 ALS2Q96Q42 1657 aa27.59■■■□□ 2.01
SPHK1-202ENST00000392496 GNAI1P63096 354 aa27.58■■■□□ 2.01
SPHK1-202ENST00000392496 ZNF853P0CG23 659 aa27.57■■■□□ 2
SPHK1-202ENST00000392496 SLAIN2Q9P270 581 aa27.57■■■□□ 2
SPHK1-202ENST00000392496 GCP02774 474 aa27.55■■■□□ 2
SPHK1-202ENST00000392496 UBAP1LF5GYI3 381 aa27.55■■■□□ 2
SPHK1-202ENST00000392496 THUMPD2Q9BTF0 503 aaKnown RBP27.55■■■□□ 2
SPHK1-202ENST00000392496 CANXP27824 592 aaKnown RBP27.54■■■□□ 2
SPHK1-202ENST00000392496 NPHP3Q7Z494 1330 aa27.54■■■□□ 2
SPHK1-202ENST00000392496 CFAP44Q96MT7 982 aa27.53■■■□□ 2
SPHK1-202ENST00000392496 LMOD2Q6P5Q4 547 aa27.52■■■□□ 2
SPHK1-202ENST00000392496 ARHGEF25Q86VW2 580 aa27.52■■■□□ 2
SPHK1-202ENST00000392496 TSHZ2Q9NRE2 1034 aa27.52■■■□□ 2
SPHK1-202ENST00000392496 ZNF428Q96B54 188 aa27.51■■□□□ 1.99
SPHK1-202ENST00000392496 LAS1LQ9Y4W2 734 aaKnown RBP27.51■■□□□ 1.99
SPHK1-202ENST00000392496 FAM83GA6ND36 823 aa27.5■■□□□ 1.99
SPHK1-202ENST00000392496 GAS2L2Q8NHY3 880 aa27.5■■□□□ 1.99
SPHK1-202ENST00000392496 FRAT1Q92837 279 aaPredicted RBP27.5■■□□□ 1.99
SPHK1-202ENST00000392496 LTV1Q96GA3 475 aaPredicted RBP27.49■■□□□ 1.99
SPHK1-202ENST00000392496 MTHFSDQ2M296 383 aaKnown RBP27.48■■□□□ 1.99
SPHK1-202ENST00000392496 MBIPQ9NS73 344 aa27.48■■□□□ 1.99
SPHK1-202ENST00000392496 ALDH1L2Q3SY69 923 aa27.48■■□□□ 1.99
SPHK1-202ENST00000392496 BCL2L13Q9BXK5 485 aa27.48■■□□□ 1.99
SPHK1-202ENST00000392496 PXDNQ92626 1479 aa27.47■■□□□ 1.99
SPHK1-202ENST00000392496 DCTN1Q14203 1278 aa27.47■■□□□ 1.99
SPHK1-202ENST00000392496 SMC4Q9NTJ3 1288 aa27.47■■□□□ 1.99
SPHK1-202ENST00000392496 MED1Q15648 1581 aaPredicted RBP27.46■■□□□ 1.99
SPHK1-202ENST00000392496 SSH1Q8WYL5 1049 aa27.46■■□□□ 1.99
SPHK1-202ENST00000392496 TNS3Q68CZ2 1445 aa27.46■■□□□ 1.99
SPHK1-202ENST00000392496 HTATSF1O43719 755 aaKnown RBP27.45■■□□□ 1.98
SPHK1-202ENST00000392496 MS4A1P11836 297 aa27.45■■□□□ 1.98
SPHK1-202ENST00000392496 ZKSCAN2Q63HK3 967 aa27.44■■□□□ 1.98
SPHK1-202ENST00000392496 ZBTB7CA1YPR0 619 aa27.43■■□□□ 1.98
SPHK1-202ENST00000392496 PIP4K2BP78356 416 aa27.43■■□□□ 1.98
SPHK1-202ENST00000392496 PANK1Q8TE04 598 aa27.43■■□□□ 1.98
SPHK1-202ENST00000392496 DDX17Q92841 729 aaKnown RBP27.43■■□□□ 1.98
SPHK1-202ENST00000392496 BRPF1P55201 1214 aaPredicted RBP27.42■■□□□ 1.98
SPHK1-202ENST00000392496 AAMPQ13685 434 aa27.42■■□□□ 1.98
SPHK1-202ENST00000392496 BRINP3Q76B58 766 aa27.42■■□□□ 1.98
SPHK1-202ENST00000392496 MCM10Q7L590 875 aa27.42■■□□□ 1.98
SPHK1-202ENST00000392496 RTF1Q92541 710 aaKnown RBP27.42■■□□□ 1.98
SPHK1-202ENST00000392496 CRB1P82279 1406 aa27.42■■□□□ 1.98
SPHK1-202ENST00000392496 VAMP4O75379 141 aa27.41■■□□□ 1.98
SPHK1-202ENST00000392496 SPATA31A3Q5VYP0 1347 aa27.41■■□□□ 1.98
SPHK1-202ENST00000392496 CHL1O00533 1208 aa27.4■■□□□ 1.98
SPHK1-202ENST00000392496 NBPF6Q5VWK0 638 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms