RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 ZKSCAN2Q63HK3 967 aa24.56■■□□□ 1.52
ERCC2-203ENST00000391944 TNNQ9UQP3 1299 aa24.56■■□□□ 1.52
ERCC2-203ENST00000391944 SKAP1Q86WV1 359 aa24.55■■□□□ 1.52
ERCC2-203ENST00000391944 SMC4Q9NTJ3 1288 aa24.55■■□□□ 1.52
ERCC2-203ENST00000391944 PEAK1Q9H792 1746 aa24.55■■□□□ 1.52
ERCC2-203ENST00000391944 SSH1Q8WYL5 1049 aa24.55■■□□□ 1.52
ERCC2-203ENST00000391944 BACH2Q9BYV9 841 aa24.54■■□□□ 1.52
ERCC2-203ENST00000391944 DLG5Q8TDM6 1919 aa24.54■■□□□ 1.52
ERCC2-203ENST00000391944 LMOD3Q0VAK6 560 aa24.53■■□□□ 1.52
ERCC2-203ENST00000391944 HSP90AB2PQ58FF8 381 aa24.52■■□□□ 1.52
ERCC2-203ENST00000391944 IGHDP01880 384 aa24.52■■□□□ 1.52
ERCC2-203ENST00000391944 IFT57Q9NWB7 429 aa24.51■■□□□ 1.51
ERCC2-203ENST00000391944 GNAI1P63096 354 aa24.51■■□□□ 1.51
ERCC2-203ENST00000391944 SULT6B1Q6IMI4 303 aa24.51■■□□□ 1.51
ERCC2-203ENST00000391944 DZIP1LQ8IYY4 767 aaKnown RBP24.51■■□□□ 1.51
ERCC2-203ENST00000391944 ZNF428Q96B54 188 aa24.51■■□□□ 1.51
ERCC2-203ENST00000391944 PIK3C2AO00443 1686 aa24.51■■□□□ 1.51
ERCC2-203ENST00000391944 ZNF853P0CG23 659 aa24.5■■□□□ 1.51
ERCC2-203ENST00000391944 ALDH1L2Q3SY69 923 aa24.5■■□□□ 1.51
ERCC2-203ENST00000391944 THUMPD2Q9BTF0 503 aaKnown RBP24.5■■□□□ 1.51
ERCC2-203ENST00000391944 MAP3K19Q56UN5 1328 aa24.5■■□□□ 1.51
ERCC2-203ENST00000391944 LAS1LQ9Y4W2 734 aaKnown RBP24.5■■□□□ 1.51
ERCC2-203ENST00000391944 RGPD1P0DJD0 1748 aa24.49■■□□□ 1.51
ERCC2-203ENST00000391944 MVPQ14764 893 aaKnown RBP24.49■■□□□ 1.51
ERCC2-203ENST00000391944 AEBP1Q8IUX7 1158 aa24.49■■□□□ 1.51
ERCC2-203ENST00000391944 SOX12O15370 315 aa24.48■■□□□ 1.51
ERCC2-203ENST00000391944 DNAJC5Q9H3Z4 198 aa24.48■■□□□ 1.51
ERCC2-203ENST00000391944 SBNO1A3KN83 1393 aa24.48■■□□□ 1.51
ERCC2-203ENST00000391944 FTSJ3Q8IY81 847 aaKnown RBP24.47■■□□□ 1.51
ERCC2-203ENST00000391944 TRIM27P14373 513 aa24.47■■□□□ 1.51
ERCC2-203ENST00000391944 ATF7IPQ6VMQ6 1270 aa24.47■■□□□ 1.51
ERCC2-203ENST00000391944 FLT4P35916 1363 aa24.46■■□□□ 1.51
ERCC2-203ENST00000391944 KIF16BQ96L93 1317 aa24.46■■□□□ 1.51
ERCC2-203ENST00000391944 NLRP6P59044 892 aa24.46■■□□□ 1.51
ERCC2-203ENST00000391944 CFAP44Q96MT7 982 aa24.46■■□□□ 1.51
ERCC2-203ENST00000391944 NOB1Q9ULX3 412 aaKnown RBP24.46■■□□□ 1.51
ERCC2-203ENST00000391944 NPHP4O75161 1426 aaPredicted RBP24.45■■□□□ 1.51
ERCC2-203ENST00000391944 BRPF1P55201 1214 aaPredicted RBP24.45■■□□□ 1.51
ERCC2-203ENST00000391944 ANP32AP39687 249 aaKnown RBP24.45■■□□□ 1.5
ERCC2-203ENST00000391944 PCDHB15Q9Y5E8 787 aa24.45■■□□□ 1.5
ERCC2-203ENST00000391944 IPO8O15397 1037 aaKnown RBP24.44■■□□□ 1.5
ERCC2-203ENST00000391944 USP54Q70EL1 1684 aa24.44■■□□□ 1.5
ERCC2-203ENST00000391944 MBIPQ9NS73 344 aa24.44■■□□□ 1.5
ERCC2-203ENST00000391944 ARHGEF10O15013 1369 aa24.43■■□□□ 1.5
ERCC2-203ENST00000391944 VAMP4O75379 141 aa24.43■■□□□ 1.5
ERCC2-203ENST00000391944 PHF8Q9UPP1 1060 aa24.43■■□□□ 1.5
ERCC2-203ENST00000391944 FAM83GA6ND36 823 aa24.43■■□□□ 1.5
ERCC2-203ENST00000391944 ADGRL3Q9HAR2 1447 aa24.42■■□□□ 1.5
ERCC2-203ENST00000391944 ANP32EQ9BTT0 268 aa24.42■■□□□ 1.5
ERCC2-203ENST00000391944 AMPHP49418 695 aa24.41■■□□□ 1.5
ERCC2-203ENST00000391944 MARF1Q9Y4F3 1742 aaKnown RBP24.41■■□□□ 1.5
ERCC2-203ENST00000391944 KIF24Q5T7B8 1368 aa24.41■■□□□ 1.5
ERCC2-203ENST00000391944 ABTB2Q8N961 1025 aa24.4■■□□□ 1.5
ERCC2-203ENST00000391944 RBM33Q96EV2 1170 aaKnown RBP24.4■■□□□ 1.5
ERCC2-203ENST00000391944 DDX19BQ9UMR2 479 aa24.4■■□□□ 1.5
ERCC2-203ENST00000391944 DCTN1Q14203 1278 aa24.39■■□□□ 1.5
ERCC2-203ENST00000391944 RGS3P49796 1198 aa24.39■■□□□ 1.49
ERCC2-203ENST00000391944 TSPYL6Q8N831 410 aa24.39■■□□□ 1.49
ERCC2-203ENST00000391944 KDRP35968 1356 aa24.38■■□□□ 1.49
ERCC2-203ENST00000391944 RWDD1Q9H446 243 aaPredicted RBP24.38■■□□□ 1.49
ERCC2-203ENST00000391944 PAK3O75914 559 aaPredicted RBP24.37■■□□□ 1.49
ERCC2-203ENST00000391944 IPO9Q96P70 1041 aaKnown RBP24.37■■□□□ 1.49
ERCC2-203ENST00000391944 IGSF1Q8N6C5 1336 aa24.36■■□□□ 1.49
ERCC2-203ENST00000391944 NUTM2GQ5VZR2 741 aa24.36■■□□□ 1.49
ERCC2-203ENST00000391944 MRPL50Q8N5N7 158 aaKnown RBP24.36■■□□□ 1.49
ERCC2-203ENST00000391944 TWISTNBQ3B726 338 aaPredicted RBP24.35■■□□□ 1.49
ERCC2-203ENST00000391944 FAM161AQ3B820 660 aa24.35■■□□□ 1.49
ERCC2-203ENST00000391944 ITPRIPQ8IWB1 547 aa24.35■■□□□ 1.49
ERCC2-203ENST00000391944 TMEM57Q8N5G2 664 aa24.35■■□□□ 1.49
ERCC2-203ENST00000391944 EYA1Q99502 592 aa24.35■■□□□ 1.49
ERCC2-203ENST00000391944 ARHGAP45Q92619 1136 aa24.35■■□□□ 1.49
ERCC2-203ENST00000391944 C8orf58Q8NAV2 365 aa24.34■■□□□ 1.49
ERCC2-203ENST00000391944 HOXC9P31274 260 aa24.34■■□□□ 1.49
ERCC2-203ENST00000391944 ELL2O00472 640 aaPredicted RBP24.33■■□□□ 1.48
ERCC2-203ENST00000391944 CHL1O00533 1208 aa24.33■■□□□ 1.48
ERCC2-203ENST00000391944 ESCO1Q5FWF5 840 aa24.33■■□□□ 1.48
ERCC2-203ENST00000391944 C8orf34Q49A92 452 aa24.32■■□□□ 1.48
ERCC2-203ENST00000391944 NWD1Q149M9 1564 aa24.32■■□□□ 1.48
ERCC2-203ENST00000391944 ERICH6Q7L0X2 663 aa24.31■■□□□ 1.48
ERCC2-203ENST00000391944 MCM10Q7L590 875 aa24.31■■□□□ 1.48
ERCC2-203ENST00000391944 ZBTB40Q9NUA8 1239 aa24.31■■□□□ 1.48
ERCC2-203ENST00000391944 PSME1Q06323 249 aa24.3■■□□□ 1.48
ERCC2-203ENST00000391944 MTHFSDQ2M296 383 aaKnown RBP24.3■■□□□ 1.48
ERCC2-203ENST00000391944 NPM2Q86SE8 214 aaKnown RBP24.3■■□□□ 1.48
ERCC2-203ENST00000391944 C14orf37Q86TY3 774 aa24.3■■□□□ 1.48
ERCC2-203ENST00000391944 NOP58Q9Y2X3 529 aaKnown RBP24.29■■□□□ 1.48
ERCC2-203ENST00000391944 HDAC1Q13547 482 aaPredicted RBP24.29■■□□□ 1.48
ERCC2-203ENST00000391944 CRB1P82279 1406 aa24.28■■□□□ 1.48
ERCC2-203ENST00000391944 RTL1A6NKG5 1358 aa24.28■■□□□ 1.48
ERCC2-203ENST00000391944 HAP1P54257 671 aaPredicted RBP24.27■■□□□ 1.48
ERCC2-203ENST00000391944 GAS2L2Q8NHY3 880 aa24.27■■□□□ 1.48
ERCC2-203ENST00000391944 PDZRN3Q9UPQ7 1066 aa24.27■■□□□ 1.48
ERCC2-203ENST00000391944 KIAA0232Q92628 1395 aa24.27■■□□□ 1.48
ERCC2-203ENST00000391944 FOXO3O43524 673 aa24.26■■□□□ 1.47
ERCC2-203ENST00000391944 RTF1Q92541 710 aaKnown RBP24.25■■□□□ 1.47
ERCC2-203ENST00000391944 LTN1O94822 1766 aa24.24■■□□□ 1.47
ERCC2-203ENST00000391944 PROSER2Q86WR7 435 aaPredicted RBP24.24■■□□□ 1.47
ERCC2-203ENST00000391944 CHMP4BQ9H444 224 aaKnown RBP24.24■■□□□ 1.47
ERCC2-203ENST00000391944 ZBTB47Q9UFB7 747 aaPredicted RBP24.24■■□□□ 1.47
ERCC2-203ENST00000391944 NFAT5O94916 1531 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms