RNA–Protein interactions for RNA: ENST00000389759.7

PKP4-202, Transcript of plakophilin 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PKP4, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-202ENST00000389759 TTC5Q8N0Z6 440 aa10.28□□□□□ -0.76
PKP4-202ENST00000389759 NEUROD6Q96NK8 337 aa10.28□□□□□ -0.76
PKP4-202ENST00000389759 TRIM27P14373 513 aa10.28□□□□□ -0.76
PKP4-202ENST00000389759 CEP57L1Q8IYX8 460 aa10.28□□□□□ -0.76
PKP4-202ENST00000389759 GAS2L2Q8NHY3 880 aa10.28□□□□□ -0.76
PKP4-202ENST00000389759 PPP6R1Q9UPN7 881 aa10.27□□□□□ -0.76
PKP4-202ENST00000389759 ERICH4A6NGS2 130 aa10.27□□□□□ -0.77
PKP4-202ENST00000389759 SERPINC1P01008 464 aa10.27□□□□□ -0.77
PKP4-202ENST00000389759 TTLL5Q6EMB2 1281 aa10.27□□□□□ -0.77
PKP4-202ENST00000389759 GPRASP1Q5JY77 1395 aa10.27□□□□□ -0.77
PKP4-202ENST00000389759 SUPT6HQ7KZ85 1726 aaKnown RBP10.27□□□□□ -0.77
PKP4-202ENST00000389759 ALDH1L2Q3SY69 923 aa10.27□□□□□ -0.77
PKP4-202ENST00000389759 BLOC1S2Q6QNY1 142 aa10.27□□□□□ -0.77
PKP4-202ENST00000389759 UBXN4Q92575 508 aa10.27□□□□□ -0.77
PKP4-202ENST00000389759 ZHX1Q9UKY1 873 aaPredicted RBP10.27□□□□□ -0.77
PKP4-202ENST00000389759 PRDM2Q13029 1718 aa10.27□□□□□ -0.77
PKP4-202ENST00000389759 AQRO60306 1485 aaKnown RBP eCLIP10.27□□□□□ -0.771e-9■■■■□ 21.4
PKP4-202ENST00000389759 CDR1P51861 262 aa10.27□□□□□ -0.77
PKP4-202ENST00000389759 STK3Q13188 491 aa10.27□□□□□ -0.77
PKP4-202ENST00000389759 WASHC4Q2M389 1173 aa10.27□□□□□ -0.77
PKP4-202ENST00000389759 RIC3Q7Z5B4 369 aa10.27□□□□□ -0.77
PKP4-202ENST00000389759 ERC1Q8IUD2 1116 aa10.27□□□□□ -0.77
PKP4-202ENST00000389759 TBC1D9Q6ZT07 1266 aa10.26□□□□□ -0.77
PKP4-202ENST00000389759 JAKMIP1Q96N16 626 aaKnown RBP10.26□□□□□ -0.77
PKP4-202ENST00000389759 CFAP45Q9UL16 551 aa10.26□□□□□ -0.77
PKP4-202ENST00000389759 DHX29Q7Z478 1369 aaKnown RBP10.26□□□□□ -0.77
PKP4-202ENST00000389759 NSD3Q9BZ95 1437 aa10.26□□□□□ -0.77
PKP4-202ENST00000389759 KIF2AO00139 706 aaPredicted RBP10.26□□□□□ -0.77
PKP4-202ENST00000389759 PTPN14Q15678 1187 aa10.26□□□□□ -0.77
PKP4-202ENST00000389759 SULT6B1Q6IMI4 303 aa10.26□□□□□ -0.77
PKP4-202ENST00000389759 PRIMPOLQ96LW4 560 aa10.26□□□□□ -0.77
PKP4-202ENST00000389759 PDRG1Q9NUG6 133 aa10.26□□□□□ -0.77
PKP4-202ENST00000389759 POLA1P09884 1462 aaPredicted RBP10.26□□□□□ -0.77
PKP4-202ENST00000389759 DHX16O60231 1041 aaKnown RBP10.26□□□□□ -0.77
PKP4-202ENST00000389759 AIMP1Q12904 312 aaKnown RBP10.26□□□□□ -0.77
PKP4-202ENST00000389759 CAGE1Q8TC20 777 aa10.26□□□□□ -0.77
PKP4-202ENST00000389759 PATL2C9JE40 543 aaKnown RBP10.25□□□□□ -0.77
PKP4-202ENST00000389759 JMYQ8N9B5 988 aa10.25□□□□□ -0.77
PKP4-202ENST00000389759 EXOC6BQ9Y2D4 811 aa10.25□□□□□ -0.77
PKP4-202ENST00000389759 PCDHB15Q9Y5E8 787 aa10.25□□□□□ -0.77
PKP4-202ENST00000389759 ERICH2A1L162 156 aa10.25□□□□□ -0.77
PKP4-202ENST00000389759 NFE2L2Q16236 605 aa10.25□□□□□ -0.77
PKP4-202ENST00000389759 FILIP1LQ4L180 1135 aa10.25□□□□□ -0.77
PKP4-202ENST00000389759 HDGFL1Q5TGJ6 251 aa10.25□□□□□ -0.77
PKP4-202ENST00000389759 FERMT3Q86UX7 667 aa10.25□□□□□ -0.77
PKP4-202ENST00000389759 FAM177A1Q8N128 213 aaPredicted RBP10.25□□□□□ -0.77
PKP4-202ENST00000389759 IL1RAPL2Q9NP60 686 aa10.25□□□□□ -0.77
PKP4-202ENST00000389759 ABCC11Q96J66 1382 aa10.25□□□□□ -0.77
PKP4-202ENST00000389759 ZSCAN23Q3MJ62 389 aa10.25□□□□□ -0.77
PKP4-202ENST00000389759 PRAM1Q96QH2 718 aa10.25□□□□□ -0.77
PKP4-202ENST00000389759 PCF11O94913 1555 aaKnown RBP10.25□□□□□ -0.77
PKP4-202ENST00000389759 ERLIN1O75477 346 aa10.25□□□□□ -0.77
PKP4-202ENST00000389759 MAP4K4O95819 1239 aaPredicted RBP10.25□□□□□ -0.77
PKP4-202ENST00000389759 AXDND1Q5T1B0 1012 aaPredicted RBP10.25□□□□□ -0.77
PKP4-202ENST00000389759 KIF18AQ8NI77 898 aa10.25□□□□□ -0.77
PKP4-202ENST00000389759 SMARCE1Q969G3 411 aa10.25□□□□□ -0.77
PKP4-202ENST00000389759 EIF3JO75822 258 aaKnown RBP10.24□□□□□ -0.77
PKP4-202ENST00000389759 NAP1L1P55209 391 aaKnown RBP10.24□□□□□ -0.77
PKP4-202ENST00000389759 PPP4R3BQ5MIZ7 849 aa10.24□□□□□ -0.77
PKP4-202ENST00000389759 CWC27Q6UX04 472 aaKnown RBP10.24□□□□□ -0.77
PKP4-202ENST00000389759 TMCO3Q6UWJ1 677 aa10.24□□□□□ -0.77
PKP4-202ENST00000389759 CABP1Q9NZU7 370 aa10.24□□□□□ -0.77
PKP4-202ENST00000389759 CGNQ9P2M7 1197 aaKnown RBP10.24□□□□□ -0.77
PKP4-202ENST00000389759 GDPD2Q9HCC8 539 aa10.24□□□□□ -0.77
PKP4-202ENST00000389759 RBM27Q9P2N5 1060 aaKnown RBP10.24□□□□□ -0.77
PKP4-202ENST00000389759 ABCC5O15440 1437 aa10.23□□□□□ -0.77
PKP4-202ENST00000389759 ADCY5O95622 1261 aa10.23□□□□□ -0.77
PKP4-202ENST00000389759 TNNT1P13805 278 aa10.23□□□□□ -0.77
PKP4-202ENST00000389759 CAMK4Q16566 473 aa10.23□□□□□ -0.77
PKP4-202ENST00000389759 DNAJC2Q99543 621 aaKnown RBP10.23□□□□□ -0.77
PKP4-202ENST00000389759 SCAND2PQ9GZW5 306 aaPredicted RBP10.23□□□□□ -0.77
PKP4-202ENST00000389759 SRGAP3O43295 1099 aa10.23□□□□□ -0.77
PKP4-202ENST00000389759 ATP2B1P20020 1258 aa10.23□□□□□ -0.77
PKP4-202ENST00000389759 RDXP35241 583 aaKnown RBP10.23□□□□□ -0.77
PKP4-202ENST00000389759 THUMPD2Q9BTF0 503 aaKnown RBP10.23□□□□□ -0.77
PKP4-202ENST00000389759 ZKSCAN5Q9Y2L8 839 aa10.23□□□□□ -0.77
PKP4-202ENST00000389759 EPRSP07814 1512 aaKnown RBP10.23□□□□□ -0.77
PKP4-202ENST00000389759 ARHGAP5Q13017 1502 aa10.23□□□□□ -0.77
PKP4-202ENST00000389759 PLEKHH1Q9ULM0 1364 aa10.23□□□□□ -0.77
PKP4-202ENST00000389759 SMARCA5O60264 1052 aaPredicted RBP10.23□□□□□ -0.77
PKP4-202ENST00000389759 MX1P20591 662 aa10.23□□□□□ -0.77
PKP4-202ENST00000389759 CASTP20810 708 aaKnown RBP10.23□□□□□ -0.77
PKP4-202ENST00000389759 HDAC1Q13547 482 aaPredicted RBP10.23□□□□□ -0.77
PKP4-202ENST00000389759 LRSAM1Q6UWE0 723 aa10.23□□□□□ -0.77
PKP4-202ENST00000389759 C16orf45Q96MC5 204 aaPredicted RBP10.23□□□□□ -0.77
PKP4-202ENST00000389759 RRAGDQ9NQL2 400 aaPredicted RBP10.23□□□□□ -0.77
PKP4-202ENST00000389759 CBFA2T2O43439 604 aa10.23□□□□□ -0.77
PKP4-202ENST00000389759 SFPQP23246 707 aaKnown RBP eCLIP10.23□□□□□ -0.776e-7■□□□□ 10.9
PKP4-202ENST00000389759 CCDC83Q8IWF9 413 aa10.23□□□□□ -0.77
PKP4-202ENST00000389759 BRPF1P55201 1214 aaPredicted RBP10.22□□□□□ -0.77
PKP4-202ENST00000389759 SKIDA1Q1XH10 827 aa10.22□□□□□ -0.77
PKP4-202ENST00000389759 UVSSAQ2YD98 709 aa10.22□□□□□ -0.77
PKP4-202ENST00000389759 SNX21Q969T3 373 aa10.22□□□□□ -0.77
PKP4-202ENST00000389759 TSPYL1Q9H0U9 437 aa10.22□□□□□ -0.77
PKP4-202ENST00000389759 CALCOCO1Q9P1Z2 691 aa10.22□□□□□ -0.77
PKP4-202ENST00000389759 OFD1O75665 1012 aa10.22□□□□□ -0.77
PKP4-202ENST00000389759 GTF2E1P29083 439 aaPredicted RBP10.22□□□□□ -0.77
PKP4-202ENST00000389759 MAPK8IP2Q13387 824 aaPredicted RBP10.22□□□□□ -0.77
PKP4-202ENST00000389759 HECW1Q76N89 1606 aa10.22□□□□□ -0.77
PKP4-202ENST00000389759 XBP1P17861 261 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms