RNA–Protein interactions for RNA: ENST00000384741.1

RNU6-41P-201, Transcript of RNA, U6 small nuclear 41, pseudogene, humanhuman

BASIC

Gene RNU6-41P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-41P-201ENST00000384741 YBX3P16989 372 aaKnown RBP eCLIP4.44□□□□□ -1.7
RNU6-41P-201ENST00000384741 USP46P62068 366 aa4.44□□□□□ -1.7
RNU6-41P-201ENST00000384741 SUV39H2Q9H5I1 410 aa4.44□□□□□ -1.7
RNU6-41P-201ENST00000384741 GRIN2CQ14957 1233 aa4.43□□□□□ -1.7
RNU6-41P-201ENST00000384741 FOXJ1Q92949 421 aa4.43□□□□□ -1.7
RNU6-41P-201ENST00000384741 KRTAP4-5Q9BYR2 181 aa4.43□□□□□ -1.7
RNU6-41P-201ENST00000384741 WDR70Q9NW82 654 aa4.43□□□□□ -1.7
RNU6-41P-201ENST00000384741 SHISA8B8ZZ34 492 aa4.42□□□□□ -1.7
RNU6-41P-201ENST00000384741 GPR25O00155 361 aa4.42□□□□□ -1.7
RNU6-41P-201ENST00000384741 CTSOP43234 321 aaPredicted RBP4.42□□□□□ -1.7
RNU6-41P-201ENST00000384741 LAMC2Q13753 1193 aa4.42□□□□□ -1.7
RNU6-41P-201ENST00000384741 RSPO4Q2I0M5 234 aaPredicted RBP4.42□□□□□ -1.7
RNU6-41P-201ENST00000384741 ZNF837Q96EG3 531 aaPredicted RBP4.42□□□□□ -1.7
RNU6-41P-201ENST00000384741 FSHRP23945 695 aa4.41□□□□□ -1.7
RNU6-41P-201ENST00000384741 C4orf48Q5BLP8 95 aa4.41□□□□□ -1.7
RNU6-41P-201ENST00000384741 Q6ZVU0 165 aa4.41□□□□□ -1.7
RNU6-41P-201ENST00000384741 RNF217Q8TC41 542 aa4.41□□□□□ -1.7
RNU6-41P-201ENST00000384741 HOXB4P17483 251 aaPredicted RBP4.4□□□□□ -1.71
RNU6-41P-201ENST00000384741 CBLBQ13191 982 aa4.4□□□□□ -1.71
RNU6-41P-201ENST00000384741 NKAPLQ5M9Q1 402 aa4.4□□□□□ -1.71
RNU6-41P-201ENST00000384741 MCTP1Q6DN14 999 aa4.4□□□□□ -1.71
RNU6-41P-201ENST00000384741 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.71
RNU6-41P-201ENST00000384741 EMILIN1Q9Y6C2 1016 aa4.4□□□□□ -1.71
RNU6-41P-201ENST00000384741 LINC00114Q6XXX2 140 aa4.39□□□□□ -1.71
RNU6-41P-201ENST00000384741 FZD5Q13467 585 aa4.38□□□□□ -1.71
RNU6-41P-201ENST00000384741 LRP8Q14114 963 aa4.38□□□□□ -1.71
RNU6-41P-201ENST00000384741 GNPATO15228 680 aa4.37□□□□□ -1.71
RNU6-41P-201ENST00000384741 DYRK3O43781 588 aa4.37□□□□□ -1.71
RNU6-41P-201ENST00000384741 C1orf229Q6ZS94 237 aaPredicted RBP4.37□□□□□ -1.71
RNU6-41P-201ENST00000384741 CCDC116Q8IYX3 515 aa4.37□□□□□ -1.71
RNU6-41P-201ENST00000384741 FMNL2Q96PY5 1086 aa4.37□□□□□ -1.71
RNU6-41P-201ENST00000384741 INSM2Q96T92 566 aaPredicted RBP4.37□□□□□ -1.71
RNU6-41P-201ENST00000384741 GPR37O15354 613 aa4.36□□□□□ -1.71
RNU6-41P-201ENST00000384741 TRIM22Q8IYM9 498 aa4.36□□□□□ -1.71
RNU6-41P-201ENST00000384741 GMCL1Q96IK5 515 aa4.36□□□□□ -1.71
RNU6-41P-201ENST00000384741 C1QTNF2Q9BXJ5 285 aa4.36□□□□□ -1.71
RNU6-41P-201ENST00000384741 OXCT2Q9BYC2 517 aaPredicted RBP4.36□□□□□ -1.71
RNU6-41P-201ENST00000384741 PCDHGC3Q9UN70 934 aa4.36□□□□□ -1.71
RNU6-41P-201ENST00000384741 MAP4K5Q9Y4K4 846 aa4.36□□□□□ -1.71
RNU6-41P-201ENST00000384741 TXKP42681 527 aa4.35□□□□□ -1.71
RNU6-41P-201ENST00000384741 GATA4P43694 442 aa4.35□□□□□ -1.71
RNU6-41P-201ENST00000384741 ARHGEF1Q92888 912 aaKnown RBP4.35□□□□□ -1.71
RNU6-41P-201ENST00000384741 AGBL1Q96MI9 1066 aa4.35□□□□□ -1.71
RNU6-41P-201ENST00000384741 RRAGCQ9HB90 399 aa4.35□□□□□ -1.71
RNU6-41P-201ENST00000384741 POLMQ9NP87 494 aaPredicted RBP4.35□□□□□ -1.71
RNU6-41P-201ENST00000384741 GNB5O14775 395 aa4.34□□□□□ -1.71
RNU6-41P-201ENST00000384741 PAX4O43316 350 aa4.34□□□□□ -1.71
RNU6-41P-201ENST00000384741 HYAL3O43820 417 aaPredicted RBP4.34□□□□□ -1.71
RNU6-41P-201ENST00000384741 MX2P20592 715 aa4.34□□□□□ -1.71
RNU6-41P-201ENST00000384741 DBN1Q16643 649 aa4.34□□□□□ -1.71
RNU6-41P-201ENST00000384741 FOXD4L5Q5VV16 416 aaPredicted RBP4.34□□□□□ -1.71
RNU6-41P-201ENST00000384741 FOXR1Q6PIV2 292 aa4.34□□□□□ -1.71
RNU6-41P-201ENST00000384741 C6orf229H3BNL8 230 aa4.33□□□□□ -1.72
RNU6-41P-201ENST00000384741 PRSS36Q5K4E3 855 aa4.33□□□□□ -1.72
RNU6-41P-201ENST00000384741 PPP1R26Q5T8A7 1209 aaPredicted RBP4.33□□□□□ -1.72
RNU6-41P-201ENST00000384741 GTPBP3Q969Y2 492 aaKnown RBP4.33□□□□□ -1.72
RNU6-41P-201ENST00000384741 RELBQ01201 579 aa4.32□□□□□ -1.72
RNU6-41P-201ENST00000384741 DESI1Q6ICB0 168 aa4.32□□□□□ -1.72
RNU6-41P-201ENST00000384741 VASH1Q7L8A9 365 aaPredicted RBP4.32□□□□□ -1.72
RNU6-41P-201ENST00000384741 BPHLQ86WA6 291 aaPredicted RBP4.32□□□□□ -1.72
RNU6-41P-201ENST00000384741 TRMT44Q8IYL2 757 aaKnown RBP4.32□□□□□ -1.72
RNU6-41P-201ENST00000384741 TPSG1Q9NRR2 321 aa4.32□□□□□ -1.72
RNU6-41P-201ENST00000384741 PGPEP1Q9NXJ5 209 aa4.32□□□□□ -1.72
RNU6-41P-201ENST00000384741 NSFL1CQ9UNZ2 370 aaKnown RBP4.32□□□□□ -1.72
RNU6-41P-201ENST00000384741 COL17A1Q9UMD9 1497 aaPredicted RBP4.31□□□□□ -1.72
RNU6-41P-201ENST00000384741 CTHP32929 405 aa4.31□□□□□ -1.72
RNU6-41P-201ENST00000384741 MAP2K3P46734 347 aa4.31□□□□□ -1.72
RNU6-41P-201ENST00000384741 AGERQ15109 404 aa4.31□□□□□ -1.72
RNU6-41P-201ENST00000384741 EDARADDQ8WWZ3 215 aa4.31□□□□□ -1.72
RNU6-41P-201ENST00000384741 MAP10Q9P2G4 905 aa4.31□□□□□ -1.72
RNU6-41P-201ENST00000384741 PIK3R2O00459 728 aa4.3□□□□□ -1.72
RNU6-41P-201ENST00000384741 F12P00748 615 aaPredicted RBP4.3□□□□□ -1.72
RNU6-41P-201ENST00000384741 FDX1P10109 184 aa4.3□□□□□ -1.72
RNU6-41P-201ENST00000384741 DGKGP49619 791 aa4.3□□□□□ -1.72
RNU6-41P-201ENST00000384741 PRPF38BQ5VTL8 546 aaKnown RBP4.3□□□□□ -1.72
RNU6-41P-201ENST00000384741 PRR7Q8TB68 274 aa4.3□□□□□ -1.72
RNU6-41P-201ENST00000384741 TRERF1Q96PN7 1200 aa4.3□□□□□ -1.72
RNU6-41P-201ENST00000384741 NOP53Q9NZM5 478 aaKnown RBP4.3□□□□□ -1.72
RNU6-41P-201ENST00000384741 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
RNU6-41P-201ENST00000384741 ZNF395Q9H8N7 513 aaPredicted RBP4.29□□□□□ -1.72
RNU6-41P-201ENST00000384741 DCAF8L2P0C7V8 631 aa4.28□□□□□ -1.72
RNU6-41P-201ENST00000384741 GIGYF2Q6Y7W6 1299 aaKnown RBP4.28□□□□□ -1.72
RNU6-41P-201ENST00000384741 LYSMD3Q7Z3D4 306 aa4.28□□□□□ -1.72
RNU6-41P-201ENST00000384741 KCNV2Q8TDN2 545 aa4.28□□□□□ -1.72
RNU6-41P-201ENST00000384741 KLRG1Q96E93 195 aa4.28□□□□□ -1.72
RNU6-41P-201ENST00000384741 KRTAP9-8Q9BYQ0 159 aa4.28□□□□□ -1.72
RNU6-41P-201ENST00000384741 GDF2Q9UK05 429 aaPredicted RBP4.28□□□□□ -1.72
RNU6-41P-201ENST00000384741 RHOQP17081 205 aa4.27□□□□□ -1.73
RNU6-41P-201ENST00000384741 LYPD8Q6UX82 237 aa4.27□□□□□ -1.73
RNU6-41P-201ENST00000384741 RIPOR1Q6ZS17 1223 aa4.27□□□□□ -1.73
RNU6-41P-201ENST00000384741 H7C1W4 665 aa4.26□□□□□ -1.73
RNU6-41P-201ENST00000384741 AMPD1P23109 780 aa4.26□□□□□ -1.73
RNU6-41P-201ENST00000384741 RBM26Q5T8P6 1007 aaKnown RBP4.26□□□□□ -1.73
RNU6-41P-201ENST00000384741 RIC3Q7Z5B4 369 aa4.26□□□□□ -1.73
RNU6-41P-201ENST00000384741 SLCO4C1Q6ZQN7 724 aa4.25□□□□□ -1.73
RNU6-41P-201ENST00000384741 SH3BP5LQ7L8J4 393 aa4.25□□□□□ -1.73
RNU6-41P-201ENST00000384741 GOLGA6L1Q8N7Z2 621 aa4.25□□□□□ -1.73
RNU6-41P-201ENST00000384741 PRICKLE2Q7Z3G6 844 aa4.24□□□□□ -1.73
RNU6-41P-201ENST00000384741 NUTM1Q86Y26 1132 aa4.24□□□□□ -1.73
RNU6-41P-201ENST00000384741 KDF1Q8NAX2 398 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms