RNA–Protein interactions for RNA: ENST00000381323.7

FAM49A-201, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49A, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-201ENST00000381323 ARHGEF25Q86VW2 580 aa10.7□□□□□ -0.7
FAM49A-201ENST00000381323 SPON1Q9HCB6 807 aa10.7□□□□□ -0.7
FAM49A-201ENST00000381323 KNSTRNQ9Y448 316 aa10.7□□□□□ -0.7
FAM49A-201ENST00000381323 CCDC7Q96M83 1385 aa10.7□□□□□ -0.7
FAM49A-201ENST00000381323 CRB1P82279 1406 aa10.7□□□□□ -0.7
FAM49A-201ENST00000381323 AATKQ6ZMQ8 1374 aa10.69□□□□□ -0.7
FAM49A-201ENST00000381323 ONECUT3O60422 494 aaPredicted RBP10.69□□□□□ -0.7
FAM49A-201ENST00000381323 CGNL1Q0VF96 1302 aa10.68□□□□□ -0.7
FAM49A-201ENST00000381323 NPM2Q86SE8 214 aaKnown RBP10.68□□□□□ -0.7
FAM49A-201ENST00000381323 USP19O94966 1318 aa10.68□□□□□ -0.7
FAM49A-201ENST00000381323 RRS1Q15050 365 aaKnown RBP10.68□□□□□ -0.7
FAM49A-201ENST00000381323 CPDO75976 1380 aa10.67□□□□□ -0.7
FAM49A-201ENST00000381323 NINLQ9Y2I6 1382 aa10.67□□□□□ -0.7
FAM49A-201ENST00000381323 IFT172Q9UG01 1749 aa10.67□□□□□ -0.7
FAM49A-201ENST00000381323 CLSPNQ9HAW4 1339 aa10.67□□□□□ -0.7
FAM49A-201ENST00000381323 POLD1P28340 1107 aa10.67□□□□□ -0.7
FAM49A-201ENST00000381323 MORC1Q86VD1 984 aa10.67□□□□□ -0.7
FAM49A-201ENST00000381323 OVOS2A0A0G2JMS6 1433 aa10.67□□□□□ -0.7
FAM49A-201ENST00000381323 OVOS2A0A0J9YW53 1432 aa10.67□□□□□ -0.7
FAM49A-201ENST00000381323 OVOS2Q6IE36 1432 aa10.67□□□□□ -0.7
FAM49A-201ENST00000381323 PUS7Q96PZ0 661 aaKnown RBP10.66□□□□□ -0.7
FAM49A-201ENST00000381323 ZCRB1Q8TBF4 217 aaKnown RBP10.66□□□□□ -0.7
FAM49A-201ENST00000381323 IP6K1Q92551 441 aa10.66□□□□□ -0.7
FAM49A-201ENST00000381323 NEFMP07197 916 aa10.65□□□□□ -0.7
FAM49A-201ENST00000381323 TFCP2L1Q9NZI6 479 aa10.65□□□□□ -0.7
FAM49A-201ENST00000381323 ADGRB2O60241 1585 aa10.65□□□□□ -0.7
FAM49A-201ENST00000381323 AXIN2Q9Y2T1 843 aa10.65□□□□□ -0.7
FAM49A-201ENST00000381323 ITSN1Q15811 1721 aa10.65□□□□□ -0.7
FAM49A-201ENST00000381323 EDC4Q6P2E9 1401 aaKnown RBP10.64□□□□□ -0.71
FAM49A-201ENST00000381323 ATF5Q9Y2D1 282 aaPredicted RBP10.64□□□□□ -0.71
FAM49A-201ENST00000381323 USHBP1Q8N6Y0 703 aa10.64□□□□□ -0.71
FAM49A-201ENST00000381323 SPG7Q9UQ90 795 aa10.64□□□□□ -0.71
FAM49A-201ENST00000381323 PARD3Q8TEW0 1356 aa10.63□□□□□ -0.71
FAM49A-201ENST00000381323 COL22A1Q8NFW1 1626 aaPredicted RBP10.63□□□□□ -0.71
FAM49A-201ENST00000381323 CPSF1Q10570 1443 aaKnown RBP10.63□□□□□ -0.71
FAM49A-201ENST00000381323 RGPD8O14715 1765 aaPredicted RBP10.63□□□□□ -0.71
FAM49A-201ENST00000381323 COL14A1Q05707 1796 aaKnown RBP10.63□□□□□ -0.71
FAM49A-201ENST00000381323 A0A1W2PP64 1363 aa10.63□□□□□ -0.71
FAM49A-201ENST00000381323 ZBTB7AO95365 584 aa10.63□□□□□ -0.71
FAM49A-201ENST00000381323 ERBB3P21860 1342 aa10.63□□□□□ -0.71
FAM49A-201ENST00000381323 TXNRD1Q16881 649 aa10.63□□□□□ -0.71
FAM49A-201ENST00000381323 SBNO2Q9Y2G9 1366 aa10.62□□□□□ -0.71
FAM49A-201ENST00000381323 MPRIPQ6WCQ1 1025 aa10.62□□□□□ -0.71
FAM49A-201ENST00000381323 MAP3K19Q56UN5 1328 aa10.62□□□□□ -0.71
FAM49A-201ENST00000381323 HSPA5P11021 654 aaKnown RBP10.61□□□□□ -0.71
FAM49A-201ENST00000381323 C1orf141Q5JVX7 400 aa10.61□□□□□ -0.71
FAM49A-201ENST00000381323 MARCH10Q8NA82 808 aaPredicted RBP10.61□□□□□ -0.71
FAM49A-201ENST00000381323 FBLN1P23142 703 aa10.61□□□□□ -0.71
FAM49A-201ENST00000381323 HOXC9P31274 260 aa10.61□□□□□ -0.71
FAM49A-201ENST00000381323 ARHGEF28Q8N1W1 1705 aaKnown RBP10.61□□□□□ -0.71
FAM49A-201ENST00000381323 ANKRD36BQ8N2N9 1353 aa10.6□□□□□ -0.71
FAM49A-201ENST00000381323 KCNQ2O43526 872 aa10.6□□□□□ -0.71
FAM49A-201ENST00000381323 PRIM1P49642 420 aaKnown RBP10.6□□□□□ -0.71
FAM49A-201ENST00000381323 GPR162Q16538 588 aa10.6□□□□□ -0.71
FAM49A-201ENST00000381323 ARXQ96QS3 562 aa10.6□□□□□ -0.71
FAM49A-201ENST00000381323 CCNL1Q9UK58 526 aaPredicted RBP10.6□□□□□ -0.71
FAM49A-201ENST00000381323 COL5A2P05997 1499 aaPredicted RBP10.6□□□□□ -0.71
FAM49A-201ENST00000381323 CAMKK2Q96RR4 588 aa10.6□□□□□ -0.71
FAM49A-201ENST00000381323 GLI3P10071 1580 aa10.59□□□□□ -0.71
FAM49A-201ENST00000381323 AK7Q96M32 723 aa10.59□□□□□ -0.71
FAM49A-201ENST00000381323 QRICH2Q9H0J4 1663 aa10.59□□□□□ -0.71
FAM49A-201ENST00000381323 KIAA1210Q9ULL0 1709 aa10.59□□□□□ -0.71
FAM49A-201ENST00000381323 FYB1O15117 783 aa10.59□□□□□ -0.71
FAM49A-201ENST00000381323 PANK3Q9H999 370 aa10.59□□□□□ -0.71
FAM49A-201ENST00000381323 PLSCR1O15162 318 aa10.58□□□□□ -0.72
FAM49A-201ENST00000381323 SMARCC1Q92922 1105 aaPredicted RBP10.58□□□□□ -0.72
FAM49A-201ENST00000381323 TMOD3Q9NYL9 352 aa10.58□□□□□ -0.72
FAM49A-201ENST00000381323 NPHP1O15259 732 aa10.58□□□□□ -0.72
FAM49A-201ENST00000381323 HSP90AB2PQ58FF8 381 aa10.58□□□□□ -0.72
FAM49A-201ENST00000381323 CAMTA1Q9Y6Y1 1673 aa10.58□□□□□ -0.72
FAM49A-201ENST00000381323 CFAP53Q96M91 514 aa10.58□□□□□ -0.72
FAM49A-201ENST00000381323 RBM42Q9BTD8 480 aaKnown RBP10.58□□□□□ -0.72
FAM49A-201ENST00000381323 NSD3Q9BZ95 1437 aa10.58□□□□□ -0.72
FAM49A-201ENST00000381323 PLEKHO1Q53GL0 409 aaPredicted RBP10.57□□□□□ -0.72
FAM49A-201ENST00000381323 TESK2Q96S53 571 aa10.57□□□□□ -0.72
FAM49A-201ENST00000381323 TRPM1Q7Z4N2 1603 aa10.57□□□□□ -0.72
FAM49A-201ENST00000381323 EMILIN1Q9Y6C2 1016 aa10.57□□□□□ -0.72
FAM49A-201ENST00000381323 U2SURPO15042 1029 aaKnown RBP10.57□□□□□ -0.72
FAM49A-201ENST00000381323 SLC15A2Q16348 729 aa10.57□□□□□ -0.72
FAM49A-201ENST00000381323 PCDH11XQ9BZA7 1347 aa10.56□□□□□ -0.72
FAM49A-201ENST00000381323 PCDH11YQ9BZA8 1340 aa10.56□□□□□ -0.72
FAM49A-201ENST00000381323 FLT4P35916 1363 aa10.56□□□□□ -0.72
FAM49A-201ENST00000381323 HSP90AB1P08238 724 aaKnown RBP10.56□□□□□ -0.72
FAM49A-201ENST00000381323 YY1P25490 414 aa10.56□□□□□ -0.72
FAM49A-201ENST00000381323 CC2D1BQ5T0F9 858 aaKnown RBP10.56□□□□□ -0.72
FAM49A-201ENST00000381323 USP31Q70CQ4 1352 aa10.56□□□□□ -0.72
FAM49A-201ENST00000381323 NWD2Q9ULI1 1742 aa10.56□□□□□ -0.72
FAM49A-201ENST00000381323 PHF14O94880 888 aa10.55□□□□□ -0.72
FAM49A-201ENST00000381323 PLCH1Q4KWH8 1693 aa10.55□□□□□ -0.72
FAM49A-201ENST00000381323 CABP4P57796 275 aa10.54□□□□□ -0.72
FAM49A-201ENST00000381323 SLC27A3Q5K4L6 730 aa10.54□□□□□ -0.72
FAM49A-201ENST00000381323 NBPF6Q5VWK0 638 aa10.54□□□□□ -0.72
FAM49A-201ENST00000381323 ZNF530Q6P9A1 599 aaPredicted RBP10.54□□□□□ -0.72
FAM49A-201ENST00000381323 IFNL2Q8IZJ0 200 aa10.54□□□□□ -0.72
FAM49A-201ENST00000381323 NBPF4Q96M43 638 aa10.54□□□□□ -0.72
FAM49A-201ENST00000381323 NUDCQ9Y266 331 aa10.54□□□□□ -0.72
FAM49A-201ENST00000381323 MTFR1LQ9H019 292 aa10.54□□□□□ -0.72
FAM49A-201ENST00000381323 FLAD1Q8NFF5 587 aa10.53□□□□□ -0.72
FAM49A-201ENST00000381323 ZNF330Q9Y3S2 320 aaPredicted RBP10.53□□□□□ -0.72
FAM49A-201ENST00000381323 MARF1Q9Y4F3 1742 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms