RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 COL5A2P05997 1499 aaPredicted RBP18.4■□□□□ 0.54
RPAIN-202ENST00000381208 CRB1P82279 1406 aa18.39■□□□□ 0.53
RPAIN-202ENST00000381208 KTN1Q86UP2 1357 aaKnown RBP18.38■□□□□ 0.53
RPAIN-202ENST00000381208 RGPD1P0DJD0 1748 aa18.37■□□□□ 0.53
RPAIN-202ENST00000381208 FAM182BQ5T319 152 aa18.37■□□□□ 0.53
RPAIN-202ENST00000381208 PARD3Q8TEW0 1356 aa18.37■□□□□ 0.53
RPAIN-202ENST00000381208 ZBTB7CA1YPR0 619 aa18.36■□□□□ 0.53
RPAIN-202ENST00000381208 EN1Q05925 392 aaPredicted RBP18.36■□□□□ 0.53
RPAIN-202ENST00000381208 ARHGEF25Q86VW2 580 aa18.36■□□□□ 0.53
RPAIN-202ENST00000381208 HDGFL2Q7Z4V5 671 aaPredicted RBP18.35■□□□□ 0.53
RPAIN-202ENST00000381208 CDCA7Q9BWT1 371 aaPredicted RBP18.35■□□□□ 0.53
RPAIN-202ENST00000381208 PIK3C2AO00443 1686 aa18.34■□□□□ 0.53
RPAIN-202ENST00000381208 TRIM37O94972 964 aa18.34■□□□□ 0.53
RPAIN-202ENST00000381208 TOM1L2Q6ZVM7 507 aa18.34■□□□□ 0.53
RPAIN-202ENST00000381208 WDR17Q8IZU2 1322 aa18.34■□□□□ 0.53
RPAIN-202ENST00000381208 TMC1Q8TDI8 760 aa18.33■□□□□ 0.53
RPAIN-202ENST00000381208 TERF2IPQ9NYB0 399 aa18.33■□□□□ 0.53
RPAIN-202ENST00000381208 AKAP12Q02952 1782 aa18.33■□□□□ 0.52
RPAIN-202ENST00000381208 USP31Q70CQ4 1352 aa18.32■□□□□ 0.52
RPAIN-202ENST00000381208 NINLQ9Y2I6 1382 aa18.31■□□□□ 0.52
RPAIN-202ENST00000381208 APBA3O96018 575 aa18.31■□□□□ 0.52
RPAIN-202ENST00000381208 DDB1Q16531 1140 aa18.3■□□□□ 0.52
RPAIN-202ENST00000381208 CAMKK2Q96RR4 588 aa18.3■□□□□ 0.52
RPAIN-202ENST00000381208 ABCC6O95255 1503 aa18.3■□□□□ 0.52
RPAIN-202ENST00000381208 CSB-PGBD3P0DP91 1061 aa18.3■□□□□ 0.52
RPAIN-202ENST00000381208 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.3■□□□□ 0.52
RPAIN-202ENST00000381208 CARD10Q9BWT7 1032 aa18.3■□□□□ 0.52
RPAIN-202ENST00000381208 AXIN2Q9Y2T1 843 aa18.3■□□□□ 0.52
RPAIN-202ENST00000381208 EDC4Q6P2E9 1401 aaKnown RBP18.29■□□□□ 0.52
RPAIN-202ENST00000381208 OVOS2A0A0G2JMS6 1433 aa18.29■□□□□ 0.52
RPAIN-202ENST00000381208 OVOS2A0A0J9YW53 1432 aa18.29■□□□□ 0.52
RPAIN-202ENST00000381208 SOX12O15370 315 aa18.29■□□□□ 0.52
RPAIN-202ENST00000381208 EZH2Q15910 746 aaKnown RBP18.29■□□□□ 0.52
RPAIN-202ENST00000381208 OVOS2Q6IE36 1432 aa18.29■□□□□ 0.52
RPAIN-202ENST00000381208 PARP4Q9UKK3 1724 aaKnown RBP18.29■□□□□ 0.52
RPAIN-202ENST00000381208 COL18A1P39060 1754 aa18.28■□□□□ 0.52
RPAIN-202ENST00000381208 SLC12A5Q9H2X9 1139 aa18.28■□□□□ 0.52
RPAIN-202ENST00000381208 MON2Q7Z3U7 1717 aa18.27■□□□□ 0.52
RPAIN-202ENST00000381208 TNS1Q9HBL0 1735 aaKnown RBP18.27■□□□□ 0.52
RPAIN-202ENST00000381208 CCDC7Q96M83 1385 aa18.27■□□□□ 0.52
RPAIN-202ENST00000381208 CD163L1Q9NR16 1453 aa18.27■□□□□ 0.51
RPAIN-202ENST00000381208 NFAT5O94916 1531 aa18.27■□□□□ 0.51
RPAIN-202ENST00000381208 ST20-MTHFSA0A0A6YYL1 179 aa18.26■□□□□ 0.51
RPAIN-202ENST00000381208 TESK2Q96S53 571 aa18.26■□□□□ 0.51
RPAIN-202ENST00000381208 PSDA5PKW4 1024 aaPredicted RBP18.25■□□□□ 0.51
RPAIN-202ENST00000381208 NBPF14Q5TI25 921 aa18.25■□□□□ 0.51
RPAIN-202ENST00000381208 TIMELESSQ9UNS1 1208 aa18.25■□□□□ 0.51
RPAIN-202ENST00000381208 NME9Q86XW9 330 aa18.24■□□□□ 0.51
RPAIN-202ENST00000381208 A0A1W2PP64 1363 aa18.24■□□□□ 0.51
RPAIN-202ENST00000381208 BCL9O00512 1426 aa18.24■□□□□ 0.51
RPAIN-202ENST00000381208 USP54Q70EL1 1684 aa18.23■□□□□ 0.51
RPAIN-202ENST00000381208 R3HDM1Q15032 1099 aaKnown RBP18.23■□□□□ 0.51
RPAIN-202ENST00000381208 LRP5O75197 1615 aa18.23■□□□□ 0.51
RPAIN-202ENST00000381208 EXOC5O00471 708 aa18.22■□□□□ 0.51
RPAIN-202ENST00000381208 CLSPNQ9HAW4 1339 aa18.22■□□□□ 0.51
RPAIN-202ENST00000381208 PLSCR1O15162 318 aa18.21■□□□□ 0.51
RPAIN-202ENST00000381208 TMF1P82094 1093 aa18.21■□□□□ 0.51
RPAIN-202ENST00000381208 CDCA8Q53HL2 280 aa18.21■□□□□ 0.51
RPAIN-202ENST00000381208 BCL11BQ9C0K0 894 aaPredicted RBP18.21■□□□□ 0.51
RPAIN-202ENST00000381208 ERBB3P21860 1342 aa18.21■□□□□ 0.51
RPAIN-202ENST00000381208 LRRC37A3O60309 1634 aa18.2■□□□□ 0.5
RPAIN-202ENST00000381208 USP47Q96K76 1375 aa18.19■□□□□ 0.5
RPAIN-202ENST00000381208 ABCB7O75027 752 aa18.18■□□□□ 0.5
RPAIN-202ENST00000381208 MARCH10Q8NA82 808 aaPredicted RBP18.18■□□□□ 0.5
RPAIN-202ENST00000381208 COG3Q96JB2 828 aa18.18■□□□□ 0.5
RPAIN-202ENST00000381208 ANKRD36BQ8N2N9 1353 aa18.18■□□□□ 0.5
RPAIN-202ENST00000381208 PEAK1Q9H792 1746 aa18.18■□□□□ 0.5
RPAIN-202ENST00000381208 NLRP2Q9NX02 1062 aa18.17■□□□□ 0.5
RPAIN-202ENST00000381208 ANKRD24Q8TF21 1146 aa18.17■□□□□ 0.5
RPAIN-202ENST00000381208 ZNF219Q9P2Y4 722 aaPredicted RBP18.17■□□□□ 0.5
RPAIN-202ENST00000381208 IL2RBP14784 551 aa18.16■□□□□ 0.5
RPAIN-202ENST00000381208 IP6K1Q92551 441 aa18.16■□□□□ 0.5
RPAIN-202ENST00000381208 TNS2Q63HR2 1409 aa18.15■□□□□ 0.5
RPAIN-202ENST00000381208 RREB1Q92766 1687 aa18.15■□□□□ 0.5
RPAIN-202ENST00000381208 WNK3Q9BYP7 1800 aa18.15■□□□□ 0.5
RPAIN-202ENST00000381208 RGPD5Q99666 1765 aa18.14■□□□□ 0.5
RPAIN-202ENST00000381208 RGPD3A6NKT7 1758 aaPredicted RBP18.13■□□□□ 0.49
RPAIN-202ENST00000381208 RGPD4Q7Z3J3 1758 aa18.13■□□□□ 0.49
RPAIN-202ENST00000381208 RBM42Q9BTD8 480 aaKnown RBP18.13■□□□□ 0.49
RPAIN-202ENST00000381208 LTN1O94822 1766 aa18.1■□□□□ 0.49
RPAIN-202ENST00000381208 NUP188Q5SRE5 1749 aa18.1■□□□□ 0.49
RPAIN-202ENST00000381208 AMPHP49418 695 aa18.1■□□□□ 0.49
RPAIN-202ENST00000381208 SBF2Q86WG5 1849 aa18.1■□□□□ 0.49
RPAIN-202ENST00000381208 MAP3K19Q56UN5 1328 aa18.1■□□□□ 0.49
RPAIN-202ENST00000381208 SLC4A2P04920 1241 aa18.09■□□□□ 0.49
RPAIN-202ENST00000381208 RTL1A6NKG5 1358 aa18.09■□□□□ 0.49
RPAIN-202ENST00000381208 SPON1Q9HCB6 807 aa18.08■□□□□ 0.49
RPAIN-202ENST00000381208 FYB1O15117 783 aa18.07■□□□□ 0.48
RPAIN-202ENST00000381208 HOXC9P31274 260 aa18.07■□□□□ 0.48
RPAIN-202ENST00000381208 CHRDL2Q6WN34 429 aa18.07■□□□□ 0.48
RPAIN-202ENST00000381208 PCGF6Q9BYE7 350 aa18.06■□□□□ 0.48
RPAIN-202ENST00000381208 FAM208AQ9UK61 1670 aaKnown RBP18.06■□□□□ 0.48
RPAIN-202ENST00000381208 KCNQ2O43526 872 aa18.05■□□□□ 0.48
RPAIN-202ENST00000381208 TXNRD1Q16881 649 aa18.05■□□□□ 0.48
RPAIN-202ENST00000381208 PTF1AQ7RTS3 328 aa18.05■□□□□ 0.48
RPAIN-202ENST00000381208 LTV1Q96GA3 475 aaPredicted RBP18.05■□□□□ 0.48
RPAIN-202ENST00000381208 KIF24Q5T7B8 1368 aa18.05■□□□□ 0.48
RPAIN-202ENST00000381208 PROM2Q8N271 834 aa18.04■□□□□ 0.48
RPAIN-202ENST00000381208 STK32BQ9NY57 414 aa18.04■□□□□ 0.48
RPAIN-202ENST00000381208 SMG6Q86US8 1419 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms