RNA–Protein interactions for RNA: ENST00000380043.7

SCML1-202, Transcript of Scm polycomb group protein like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCML1, Length 2,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML1-202ENST00000380043 AMPHP49418 695 aa13.68□□□□□ -0.22
SCML1-202ENST00000380043 NFE2L2Q16236 605 aa13.68□□□□□ -0.22
SCML1-202ENST00000380043 NPM2Q86SE8 214 aaKnown RBP13.68□□□□□ -0.22
SCML1-202ENST00000380043 ITSN1Q15811 1721 aa13.68□□□□□ -0.22
SCML1-202ENST00000380043 TSPYL6Q8N831 410 aa13.68□□□□□ -0.22
SCML1-202ENST00000380043 MCM10Q7L590 875 aa13.67□□□□□ -0.22
SCML1-202ENST00000380043 MON2Q7Z3U7 1717 aa13.67□□□□□ -0.22
SCML1-202ENST00000380043 IGHDP01880 384 aa13.67□□□□□ -0.22
SCML1-202ENST00000380043 AATKQ6ZMQ8 1374 aa13.66□□□□□ -0.22
SCML1-202ENST00000380043 KRT24Q2M2I5 525 aa13.66□□□□□ -0.22
SCML1-202ENST00000380043 PHF8Q9UPP1 1060 aa13.66□□□□□ -0.22
SCML1-202ENST00000380043 ADGRB2O60241 1585 aa13.66□□□□□ -0.22
SCML1-202ENST00000380043 OVOS2A0A0J9YW53 1432 aa13.66□□□□□ -0.22
SCML1-202ENST00000380043 OVOS2Q6IE36 1432 aa13.66□□□□□ -0.22
SCML1-202ENST00000380043 PNNQ9H307 717 aaKnown RBP13.66□□□□□ -0.22
SCML1-202ENST00000380043 MIS18AQ9NYP9 233 aa13.66□□□□□ -0.22
SCML1-202ENST00000380043 USHBP1Q8N6Y0 703 aa13.65□□□□□ -0.22
SCML1-202ENST00000380043 CDK12Q9NYV4 1490 aaPredicted RBP13.65□□□□□ -0.22
SCML1-202ENST00000380043 AKAP12Q02952 1782 aa13.65□□□□□ -0.22
SCML1-202ENST00000380043 FTSJ3Q8IY81 847 aaKnown RBP13.65□□□□□ -0.22
SCML1-202ENST00000380043 PSME1Q06323 249 aa13.64□□□□□ -0.23
SCML1-202ENST00000380043 DDX17Q92841 729 aaKnown RBP13.64□□□□□ -0.23
SCML1-202ENST00000380043 NOB1Q9ULX3 412 aaKnown RBP13.64□□□□□ -0.23
SCML1-202ENST00000380043 SETD1BQ9UPS6 1966 aaKnown RBP13.64□□□□□ -0.23
SCML1-202ENST00000380043 PROSER2Q86WR7 435 aaPredicted RBP13.63□□□□□ -0.23
SCML1-202ENST00000380043 MBIPQ9NS73 344 aa13.63□□□□□ -0.23
SCML1-202ENST00000380043 KDM2BQ8NHM5 1336 aa13.63□□□□□ -0.23
SCML1-202ENST00000380043 TRIM27P14373 513 aa13.63□□□□□ -0.23
SCML1-202ENST00000380043 PDE3AQ14432 1141 aa13.63□□□□□ -0.23
SCML1-202ENST00000380043 SSH2Q76I76 1423 aa13.63□□□□□ -0.23
SCML1-202ENST00000380043 PCDHB15Q9Y5E8 787 aa13.63□□□□□ -0.23
SCML1-202ENST00000380043 ITPRIPQ8IWB1 547 aa13.62□□□□□ -0.23
SCML1-202ENST00000380043 EYA1Q99502 592 aa13.62□□□□□ -0.23
SCML1-202ENST00000380043 NPHP4O75161 1426 aaPredicted RBP13.62□□□□□ -0.23
SCML1-202ENST00000380043 ADAMTSL3P82987 1691 aa13.62□□□□□ -0.23
SCML1-202ENST00000380043 ZKSCAN2Q63HK3 967 aa13.62□□□□□ -0.23
SCML1-202ENST00000380043 XRN1Q8IZH2 1706 aaKnown RBP13.61□□□□□ -0.23
SCML1-202ENST00000380043 C8orf58Q8NAV2 365 aa13.61□□□□□ -0.23
SCML1-202ENST00000380043 BCL11AQ9H165 835 aa13.61□□□□□ -0.23
SCML1-202ENST00000380043 TOPAZ1Q8N9V7 1692 aa13.61□□□□□ -0.23
SCML1-202ENST00000380043 TTC21AQ8NDW8 1320 aa13.61□□□□□ -0.23
SCML1-202ENST00000380043 PDE4AP27815 886 aa13.6□□□□□ -0.23
SCML1-202ENST00000380043 CENPQQ7L2Z9 268 aaPredicted RBP13.6□□□□□ -0.23
SCML1-202ENST00000380043 DZIP1LQ8IYY4 767 aaKnown RBP13.6□□□□□ -0.23
SCML1-202ENST00000380043 PEAK1Q9H792 1746 aa13.6□□□□□ -0.23
SCML1-202ENST00000380043 NRKQ7Z2Y5 1582 aa13.6□□□□□ -0.23
SCML1-202ENST00000380043 MTHFSDQ2M296 383 aaKnown RBP13.59□□□□□ -0.23
SCML1-202ENST00000380043 TMEM57Q8N5G2 664 aa13.59□□□□□ -0.23
SCML1-202ENST00000380043 USP31Q70CQ4 1352 aa13.58□□□□□ -0.23
SCML1-202ENST00000380043 PIK3R4Q99570 1358 aa13.58□□□□□ -0.23
SCML1-202ENST00000380043 HOXC9P31274 260 aa13.58□□□□□ -0.24
SCML1-202ENST00000380043 FLT4P35916 1363 aa13.58□□□□□ -0.24
SCML1-202ENST00000380043 ATF7IPQ6VMQ6 1270 aa13.58□□□□□ -0.24
SCML1-202ENST00000380043 NOP58Q9Y2X3 529 aaKnown RBP13.58□□□□□ -0.24
SCML1-202ENST00000380043 NALCNQ8IZF0 1738 aa13.57□□□□□ -0.24
SCML1-202ENST00000380043 IL16Q14005 1332 aa13.57□□□□□ -0.24
SCML1-202ENST00000380043 VAMP4O75379 141 aa13.57□□□□□ -0.24
SCML1-202ENST00000380043 GNAI1P63096 354 aa13.57□□□□□ -0.24
SCML1-202ENST00000380043 MVPQ14764 893 aaKnown RBP13.57□□□□□ -0.24
SCML1-202ENST00000380043 TWISTNBQ3B726 338 aaPredicted RBP13.57□□□□□ -0.24
SCML1-202ENST00000380043 PIK3C2AO00443 1686 aa13.56□□□□□ -0.24
SCML1-202ENST00000380043 LRRC59Q96AG4 307 aaKnown RBP13.56□□□□□ -0.24
SCML1-202ENST00000380043 CFAP44Q96MT7 982 aa13.56□□□□□ -0.24
SCML1-202ENST00000380043 C1orf115Q9H7X2 142 aa13.56□□□□□ -0.24
SCML1-202ENST00000380043 NBR1Q14596 966 aa13.56□□□□□ -0.24
SCML1-202ENST00000380043 SBNO1A3KN83 1393 aa13.56□□□□□ -0.24
SCML1-202ENST00000380043 IFT57Q9NWB7 429 aa13.55□□□□□ -0.24
SCML1-202ENST00000380043 CHD2O14647 1828 aaKnown RBP13.55□□□□□ -0.24
SCML1-202ENST00000380043 NECTIN2Q92692 538 aa13.55□□□□□ -0.24
SCML1-202ENST00000380043 NCBP3Q53F19 620 aaKnown RBP13.54□□□□□ -0.24
SCML1-202ENST00000380043 BACH2Q9BYV9 841 aa13.54□□□□□ -0.24
SCML1-202ENST00000380043 ADGRL3Q9HAR2 1447 aa13.54□□□□□ -0.24
SCML1-202ENST00000380043 ANKARQ7Z5J8 1434 aa13.54□□□□□ -0.24
SCML1-202ENST00000380043 ZNF853P0CG23 659 aa13.54□□□□□ -0.24
SCML1-202ENST00000380043 DLG5Q8TDM6 1919 aa13.54□□□□□ -0.24
SCML1-202ENST00000380043 ANP32AP39687 249 aaKnown RBP13.54□□□□□ -0.24
SCML1-202ENST00000380043 ZC3H6P61129 1189 aaKnown RBP13.54□□□□□ -0.24
SCML1-202ENST00000380043 LMOD3Q0VAK6 560 aa13.53□□□□□ -0.24
SCML1-202ENST00000380043 CABLES1Q8TDN4 633 aa13.53□□□□□ -0.24
SCML1-202ENST00000380043 RTF1Q92541 710 aaKnown RBP13.53□□□□□ -0.24
SCML1-202ENST00000380043 FMN2Q9NZ56 1722 aa13.53□□□□□ -0.24
SCML1-202ENST00000380043 CALD1Q05682 793 aaKnown RBP13.52□□□□□ -0.24
SCML1-202ENST00000380043 NBPF6Q5VWK0 638 aa13.52□□□□□ -0.24
SCML1-202ENST00000380043 NBPF4Q96M43 638 aa13.52□□□□□ -0.24
SCML1-202ENST00000380043 ZNF142P52746 1687 aaPredicted RBP13.52□□□□□ -0.25
SCML1-202ENST00000380043 CT47B1P0C2W7 299 aaPredicted RBP13.52□□□□□ -0.25
SCML1-202ENST00000380043 TMEM94Q12767 1356 aa13.51□□□□□ -0.25
SCML1-202ENST00000380043 IGSF1Q8N6C5 1336 aa13.51□□□□□ -0.25
SCML1-202ENST00000380043 GCP02774 474 aa13.51□□□□□ -0.25
SCML1-202ENST00000380043 KRT28Q7Z3Y7 464 aa13.51□□□□□ -0.25
SCML1-202ENST00000380043 MRPL50Q8N5N7 158 aaKnown RBP13.51□□□□□ -0.25
SCML1-202ENST00000380043 IPO9Q96P70 1041 aaKnown RBP13.5□□□□□ -0.25
SCML1-202ENST00000380043 TSPYL4Q9UJ04 414 aa13.5□□□□□ -0.25
SCML1-202ENST00000380043 KIF16BQ96L93 1317 aa13.5□□□□□ -0.25
SCML1-202ENST00000380043 ATF3P18847 181 aa13.5□□□□□ -0.25
SCML1-202ENST00000380043 C19orf44Q9H6X5 657 aa13.5□□□□□ -0.25
SCML1-202ENST00000380043 IPO8O15397 1037 aaKnown RBP13.49□□□□□ -0.25
SCML1-202ENST00000380043 AXIN2Q9Y2T1 843 aa13.49□□□□□ -0.25
SCML1-202ENST00000380043 PDZRN3Q9UPQ7 1066 aa13.49□□□□□ -0.25
SCML1-202ENST00000380043 DDX19BQ9UMR2 479 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms