RNA–Protein interactions for RNA: ENST00000379938.6

RREB1-204, Transcript of ras responsive element binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RREB1, Length 8,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RREB1-204ENST00000379938 IPO4Q8TEX9 1081 aaKnown RBP18.58■□□□□ 0.57
RREB1-204ENST00000379938 RUNDC1Q96C34 613 aa18.58■□□□□ 0.56
RREB1-204ENST00000379938 BCL2L13Q9BXK5 485 aa18.57■□□□□ 0.56
RREB1-204ENST00000379938 FERP16591 822 aa18.57■□□□□ 0.56
RREB1-204ENST00000379938 IFFO1Q0D2I5 559 aa18.57■□□□□ 0.56
RREB1-204ENST00000379938 RIC3Q7Z5B4 369 aa18.57■□□□□ 0.56
RREB1-204ENST00000379938 STAC3Q96MF2 364 aa18.57■□□□□ 0.56
RREB1-204ENST00000379938 TIGD1Q96MW7 591 aa18.57■□□□□ 0.56
RREB1-204ENST00000379938 GNAI3P08754 354 aa18.57■□□□□ 0.56
RREB1-204ENST00000379938 KIF18AQ8NI77 898 aa18.57■□□□□ 0.56
RREB1-204ENST00000379938 CPSF2Q9P2I0 782 aaKnown RBP18.57■□□□□ 0.56
RREB1-204ENST00000379938 CTR9Q6PD62 1173 aa18.57■□□□□ 0.56
RREB1-204ENST00000379938 NACAP1Q9BZK3 213 aa18.57■□□□□ 0.56
RREB1-204ENST00000379938 IVLP07476 585 aa18.57■□□□□ 0.56
RREB1-204ENST00000379938 CCDC83Q8IWF9 413 aa18.57■□□□□ 0.56
RREB1-204ENST00000379938 MNAT1P51948 309 aa18.56■□□□□ 0.56
RREB1-204ENST00000379938 PANK3Q9H999 370 aa18.56■□□□□ 0.56
RREB1-204ENST00000379938 NOL7Q9UMY1 257 aaKnown RBP18.56■□□□□ 0.56
RREB1-204ENST00000379938 IRX3P78415 501 aaPredicted RBP18.56■□□□□ 0.56
RREB1-204ENST00000379938 NEUROD6Q96NK8 337 aa18.56■□□□□ 0.56
RREB1-204ENST00000379938 DNAAF4Q8WXU2 420 aa18.56■□□□□ 0.56
RREB1-204ENST00000379938 SREK1Q8WXA9 508 aaKnown RBP18.56■□□□□ 0.56
RREB1-204ENST00000379938 HMGB1P09429 215 aaKnown RBP18.55■□□□□ 0.56
RREB1-204ENST00000379938 BBXQ8WY36 941 aaPredicted RBP18.55■□□□□ 0.56
RREB1-204ENST00000379938 WDR33Q9C0J8 1336 aaKnown RBP18.55■□□□□ 0.56
RREB1-204ENST00000379938 HOOK3Q86VS8 718 aa18.55■□□□□ 0.56
RREB1-204ENST00000379938 CEP57L1Q8IYX8 460 aa18.55■□□□□ 0.56
RREB1-204ENST00000379938 FMNL2Q96PY5 1086 aa18.55■□□□□ 0.56
RREB1-204ENST00000379938 NAP1L3Q99457 506 aaPredicted RBP18.55■□□□□ 0.56
RREB1-204ENST00000379938 VPS36Q86VN1 386 aa18.55■□□□□ 0.56
RREB1-204ENST00000379938 NOL3O60936 208 aaKnown RBP18.55■□□□□ 0.56
RREB1-204ENST00000379938 RIPK4P57078 832 aa18.55■□□□□ 0.56
RREB1-204ENST00000379938 FOXD1Q16676 465 aa18.55■□□□□ 0.56
RREB1-204ENST00000379938 KRT85P78386 507 aa18.55■□□□□ 0.56
RREB1-204ENST00000379938 FSD1Q9BTV5 496 aa18.55■□□□□ 0.56
RREB1-204ENST00000379938 GRPEL1Q9HAV7 217 aa18.55■□□□□ 0.56
RREB1-204ENST00000379938 ELL2O00472 640 aaPredicted RBP18.54■□□□□ 0.56
RREB1-204ENST00000379938 CCDC57Q2TAC2 916 aa18.54■□□□□ 0.56
RREB1-204ENST00000379938 KIF5CO60282 957 aa18.54■□□□□ 0.56
RREB1-204ENST00000379938 TMCO5BA8MYB1 307 aa18.54■□□□□ 0.56
RREB1-204ENST00000379938 HSPA4P34932 840 aa18.54■□□□□ 0.56
RREB1-204ENST00000379938 RNF187Q5TA31 235 aaPredicted RBP18.54■□□□□ 0.56
RREB1-204ENST00000379938 USP47Q96K76 1375 aa18.54■□□□□ 0.56
RREB1-204ENST00000379938 RRBP1Q9P2E9 1410 aaKnown RBP18.54■□□□□ 0.56
RREB1-204ENST00000379938 PSME1Q06323 249 aa18.54■□□□□ 0.56
RREB1-204ENST00000379938 SYTL4Q96C24 671 aaPredicted RBP18.54■□□□□ 0.56
RREB1-204ENST00000379938 ESPNB1AK53 854 aa18.53■□□□□ 0.56
RREB1-204ENST00000379938 NAA15Q9BXJ9 866 aaKnown RBP18.53■□□□□ 0.56
RREB1-204ENST00000379938 MAPK8IP2Q13387 824 aaPredicted RBP18.53■□□□□ 0.56
RREB1-204ENST00000379938 RAPGEF4Q8WZA2 1011 aa18.53■□□□□ 0.56
RREB1-204ENST00000379938 KIF6Q6ZMV9 814 aa18.53■□□□□ 0.56
RREB1-204ENST00000379938 SAMD1Q6SPF0 538 aaPredicted RBP18.53■□□□□ 0.56
RREB1-204ENST00000379938 TANGO6Q9C0B7 1094 aa18.53■□□□□ 0.56
RREB1-204ENST00000379938 TSPYL4Q9UJ04 414 aa18.53■□□□□ 0.56
RREB1-204ENST00000379938 CCDC6Q16204 474 aa18.53■□□□□ 0.56
RREB1-204ENST00000379938 CASQ1P31415 396 aa18.52■□□□□ 0.56
RREB1-204ENST00000379938 ZSCAN25Q6NSZ9 544 aa18.52■□□□□ 0.56
RREB1-204ENST00000379938 DHX37Q8IY37 1157 aaKnown RBP18.52■□□□□ 0.56
RREB1-204ENST00000379938 PRDM2Q13029 1718 aa18.52■□□□□ 0.56
RREB1-204ENST00000379938 FOSBP53539 338 aa18.52■□□□□ 0.56
RREB1-204ENST00000379938 L3MBTL2Q969R5 705 aa18.52■□□□□ 0.56
RREB1-204ENST00000379938 SMG6Q86US8 1419 aaKnown RBP18.52■□□□□ 0.56
RREB1-204ENST00000379938 SCAPERQ9BY12 1400 aa18.51■□□□□ 0.55
RREB1-204ENST00000379938 ZSCAN30Q86W11 494 aa18.51■□□□□ 0.55
RREB1-204ENST00000379938 SPA17Q15506 151 aa18.51■□□□□ 0.55
RREB1-204ENST00000379938 CCDC113Q9H0I3 377 aa18.51■□□□□ 0.55
RREB1-204ENST00000379938 WASF1Q92558 559 aa18.51■□□□□ 0.55
RREB1-204ENST00000379938 TRAK1Q9UPV9 953 aa18.51■□□□□ 0.55
RREB1-204ENST00000379938 SMARCA2P51531 1590 aa18.51■□□□□ 0.55
RREB1-204ENST00000379938 PTPN14Q15678 1187 aa18.5■□□□□ 0.55
RREB1-204ENST00000379938 CEP131Q9UPN4 1083 aa18.5■□□□□ 0.55
RREB1-204ENST00000379938 ANKS4BQ8N8V4 417 aa18.5■□□□□ 0.55
RREB1-204ENST00000379938 ME1P48163 572 aa18.5■□□□□ 0.55
RREB1-204ENST00000379938 PRPF40AO75400 957 aaKnown RBP18.5■□□□□ 0.55
RREB1-204ENST00000379938 GSTTP1A0A1W2PQM5 241 aa18.5■□□□□ 0.55
RREB1-204ENST00000379938 SOGA3Q5TF21 947 aa18.5■□□□□ 0.55
RREB1-204ENST00000379938 FGFR1OPO95684 399 aaKnown RBP18.49■□□□□ 0.55
RREB1-204ENST00000379938 CCDC30Q5VVM6 783 aa18.49■□□□□ 0.55
RREB1-204ENST00000379938 FAM177A1Q8N128 213 aaPredicted RBP18.49■□□□□ 0.55
RREB1-204ENST00000379938 NSRP1Q9H0G5 558 aaKnown RBP18.49■□□□□ 0.55
RREB1-204ENST00000379938 CEP83Q9Y592 693 aa18.49■□□□□ 0.55
RREB1-204ENST00000379938 CYP46A1Q9Y6A2 500 aa18.49■□□□□ 0.55
RREB1-204ENST00000379938 CCDC7Q96M83 1385 aa18.48■□□□□ 0.55
RREB1-204ENST00000379938 LNPKQ9C0E8 428 aa18.48■□□□□ 0.55
RREB1-204ENST00000379938 SRCIN1Q9C0H9 1055 aa18.48■□□□□ 0.55
RREB1-204ENST00000379938 CCDC158Q5M9N0 1113 aa18.48■□□□□ 0.55
RREB1-204ENST00000379938 EXOC6Q8TAG9 804 aa18.48■□□□□ 0.55
RREB1-204ENST00000379938 SMARCC1Q92922 1105 aaPredicted RBP18.47■□□□□ 0.55
RREB1-204ENST00000379938 GOLGA6L9A6NEM1 432 aa18.47■□□□□ 0.55
RREB1-204ENST00000379938 ZFYP08048 801 aaPredicted RBP18.47■□□□□ 0.55
RREB1-204ENST00000379938 SFPQP23246 707 aaKnown RBP eCLIP18.47■□□□□ 0.551e-6■■□□□ 13.4
RREB1-204ENST00000379938 UBE4AQ14139 1066 aa18.47■□□□□ 0.55
RREB1-204ENST00000379938 FSD2A1L4K1 749 aa18.47■□□□□ 0.55
RREB1-204ENST00000379938 NEMFO60524 1076 aa18.47■□□□□ 0.55
RREB1-204ENST00000379938 ST20-MTHFSA0A0A6YYL1 179 aa18.47■□□□□ 0.55
RREB1-204ENST00000379938 CCDC69A6NI79 296 aa18.47■□□□□ 0.55
RREB1-204ENST00000379938 PAIP2Q9BPZ3 127 aaKnown RBP18.47■□□□□ 0.55
RREB1-204ENST00000379938 PDS5BQ9NTI5 1447 aa18.46■□□□□ 0.55
RREB1-204ENST00000379938 FIBPO43427 364 aa18.46■□□□□ 0.55
RREB1-204ENST00000379938 UPF3BQ9BZI7 483 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms