RNA–Protein interactions for RNA: ENST00000379817.6

APTX-204, Transcript of aprataxin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APTX, Length 2,106 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-204ENST00000379817 PHACTR3Q96KR7 559 aa13.51□□□□□ -0.25
APTX-204ENST00000379817 RBM19Q9Y4C8 960 aaKnown RBP13.51□□□□□ -0.25
APTX-204ENST00000379817 SBNO1A3KN83 1393 aa13.51□□□□□ -0.25
APTX-204ENST00000379817 FLT4P35916 1363 aa13.5□□□□□ -0.25
APTX-204ENST00000379817 HSPA2P54652 639 aa13.5□□□□□ -0.25
APTX-204ENST00000379817 KIF24Q5T7B8 1368 aa13.5□□□□□ -0.25
APTX-204ENST00000379817 NCOA3Q9Y6Q9 1424 aa13.5□□□□□ -0.25
APTX-204ENST00000379817 BCAR3O75815 825 aa13.49□□□□□ -0.25
APTX-204ENST00000379817 CT47B1P0C2W7 299 aaPredicted RBP13.49□□□□□ -0.25
APTX-204ENST00000379817 AMPHP49418 695 aa13.49□□□□□ -0.25
APTX-204ENST00000379817 CALD1Q05682 793 aaKnown RBP13.49□□□□□ -0.25
APTX-204ENST00000379817 ORAI2Q96SN7 254 aa13.49□□□□□ -0.25
APTX-204ENST00000379817 CRBNQ96SW2 442 aa13.49□□□□□ -0.25
APTX-204ENST00000379817 USP54Q70EL1 1684 aa13.49□□□□□ -0.25
APTX-204ENST00000379817 PEAK1Q9H792 1746 aa13.49□□□□□ -0.25
APTX-204ENST00000379817 LMOD3Q0VAK6 560 aa13.48□□□□□ -0.25
APTX-204ENST00000379817 NUTM2GQ5VZR2 741 aa13.48□□□□□ -0.25
APTX-204ENST00000379817 SULT6B1Q6IMI4 303 aa13.48□□□□□ -0.25
APTX-204ENST00000379817 C20orf194Q5TEA3 1177 aa13.48□□□□□ -0.25
APTX-204ENST00000379817 FANCIQ9NVI1 1328 aa13.48□□□□□ -0.25
APTX-204ENST00000379817 RARSP54136 660 aaKnown RBP13.47□□□□□ -0.25
APTX-204ENST00000379817 FOXO3O43524 673 aa13.46□□□□□ -0.25
APTX-204ENST00000379817 ATF3P18847 181 aa13.46□□□□□ -0.25
APTX-204ENST00000379817 TMEM94Q12767 1356 aa13.46□□□□□ -0.25
APTX-204ENST00000379817 C1orf167Q5SNV9 1468 aa13.46□□□□□ -0.25
APTX-204ENST00000379817 ARHGEF10O15013 1369 aa13.46□□□□□ -0.25
APTX-204ENST00000379817 TSR2Q969E8 191 aaKnown RBP13.46□□□□□ -0.26
APTX-204ENST00000379817 DCCP43146 1447 aa13.45□□□□□ -0.26
APTX-204ENST00000379817 PDE3AQ14432 1141 aa13.45□□□□□ -0.26
APTX-204ENST00000379817 AEBP1Q8IUX7 1158 aa13.45□□□□□ -0.26
APTX-204ENST00000379817 KCNH5Q8NCM2 988 aa13.45□□□□□ -0.26
APTX-204ENST00000379817 LMTK3Q96Q04 1460 aa13.45□□□□□ -0.26
APTX-204ENST00000379817 MARF1Q9Y4F3 1742 aaKnown RBP13.45□□□□□ -0.26
APTX-204ENST00000379817 HOXC9P31274 260 aa13.45□□□□□ -0.26
APTX-204ENST00000379817 RGPD1P0DJD0 1748 aa13.44□□□□□ -0.26
APTX-204ENST00000379817 EXOSC9Q06265 439 aaKnown RBP13.44□□□□□ -0.26
APTX-204ENST00000379817 CANXP27824 592 aaKnown RBP13.43□□□□□ -0.26
APTX-204ENST00000379817 RTL1A6NKG5 1358 aa13.43□□□□□ -0.26
APTX-204ENST00000379817 GNAI1P63096 354 aa13.43□□□□□ -0.26
APTX-204ENST00000379817 KRT28Q7Z3Y7 464 aa13.43□□□□□ -0.26
APTX-204ENST00000379817 CADPS2Q86UW7 1296 aa13.43□□□□□ -0.26
APTX-204ENST00000379817 IFT57Q9NWB7 429 aa13.43□□□□□ -0.26
APTX-204ENST00000379817 KIF1AQ12756 1690 aa13.43□□□□□ -0.26
APTX-204ENST00000379817 IGSF1Q8N6C5 1336 aa13.42□□□□□ -0.26
APTX-204ENST00000379817 EYA1Q99502 592 aa13.42□□□□□ -0.26
APTX-204ENST00000379817 STRCP1A6NGW2 1772 aa13.42□□□□□ -0.26
APTX-204ENST00000379817 KDRP35968 1356 aa13.42□□□□□ -0.26
APTX-204ENST00000379817 MST1RQ04912 1400 aa13.42□□□□□ -0.26
APTX-204ENST00000379817 IP6K1Q92551 441 aa13.41□□□□□ -0.26
APTX-204ENST00000379817 FRAT1Q92837 279 aaPredicted RBP13.41□□□□□ -0.26
APTX-204ENST00000379817 LAS1LQ9Y4W2 734 aaKnown RBP13.41□□□□□ -0.26
APTX-204ENST00000379817 ZNF853P0CG23 659 aa13.4□□□□□ -0.26
APTX-204ENST00000379817 XPCQ01831 940 aaPredicted RBP13.4□□□□□ -0.26
APTX-204ENST00000379817 THUMPD2Q9BTF0 503 aaKnown RBP13.4□□□□□ -0.26
APTX-204ENST00000379817 MSH6P52701 1360 aa13.4□□□□□ -0.26
APTX-204ENST00000379817 ZNF428Q96B54 188 aa13.4□□□□□ -0.26
APTX-204ENST00000379817 CFAP44Q96MT7 982 aa13.4□□□□□ -0.26
APTX-204ENST00000379817 NFAT5O94916 1531 aa13.39□□□□□ -0.27
APTX-204ENST00000379817 GCP02774 474 aa13.39□□□□□ -0.27
APTX-204ENST00000379817 STRCQ7RTU9 1775 aa13.39□□□□□ -0.27
APTX-204ENST00000379817 BCL2L13Q9BXK5 485 aa13.39□□□□□ -0.27
APTX-204ENST00000379817 FAM83GA6ND36 823 aa13.38□□□□□ -0.27
APTX-204ENST00000379817 MS4A1P11836 297 aa13.38□□□□□ -0.27
APTX-204ENST00000379817 LMOD2Q6P5Q4 547 aa13.38□□□□□ -0.27
APTX-204ENST00000379817 SMC4Q9NTJ3 1288 aa13.38□□□□□ -0.27
APTX-204ENST00000379817 DLG5Q8TDM6 1919 aa13.38□□□□□ -0.27
APTX-204ENST00000379817 ALDH1L2Q3SY69 923 aa13.37□□□□□ -0.27
APTX-204ENST00000379817 ZKSCAN2Q63HK3 967 aa13.37□□□□□ -0.27
APTX-204ENST00000379817 GAS2L2Q8NHY3 880 aa13.37□□□□□ -0.27
APTX-204ENST00000379817 SSH1Q8WYL5 1049 aa13.37□□□□□ -0.27
APTX-204ENST00000379817 MBIPQ9NS73 344 aa13.37□□□□□ -0.27
APTX-204ENST00000379817 USP19O94966 1318 aa13.37□□□□□ -0.27
APTX-204ENST00000379817 TRPM3Q9HCF6 1732 aaPredicted RBP13.37□□□□□ -0.27
APTX-204ENST00000379817 SLIT3O75094 1523 aa13.37□□□□□ -0.27
APTX-204ENST00000379817 AAMPQ13685 434 aa13.37□□□□□ -0.27
APTX-204ENST00000379817 MTHFSDQ2M296 383 aaKnown RBP13.37□□□□□ -0.27
APTX-204ENST00000379817 LTV1Q96GA3 475 aaPredicted RBP13.37□□□□□ -0.27
APTX-204ENST00000379817 DCTN1Q14203 1278 aa13.36□□□□□ -0.27
APTX-204ENST00000379817 ARHGEF25Q86VW2 580 aa13.36□□□□□ -0.27
APTX-204ENST00000379817 PANK1Q8TE04 598 aa13.36□□□□□ -0.27
APTX-204ENST00000379817 NPHP3Q7Z494 1330 aa13.36□□□□□ -0.27
APTX-204ENST00000379817 LTN1O94822 1766 aa13.36□□□□□ -0.27
APTX-204ENST00000379817 RTF1Q92541 710 aaKnown RBP13.36□□□□□ -0.27
APTX-204ENST00000379817 COG6Q9Y2V7 657 aa13.36□□□□□ -0.27
APTX-204ENST00000379817 PHRF1Q9P1Y6 1649 aaKnown RBP13.35□□□□□ -0.27
APTX-204ENST00000379817 HTATSF1O43719 755 aaKnown RBP13.35□□□□□ -0.27
APTX-204ENST00000379817 VAMP4O75379 141 aa13.35□□□□□ -0.27
APTX-204ENST00000379817 IPO8O15397 1037 aaKnown RBP13.34□□□□□ -0.27
APTX-204ENST00000379817 BRPF1P55201 1214 aaPredicted RBP13.34□□□□□ -0.27
APTX-204ENST00000379817 MCM10Q7L590 875 aa13.34□□□□□ -0.27
APTX-204ENST00000379817 ZBTB7CA1YPR0 619 aa13.34□□□□□ -0.27
APTX-204ENST00000379817 CHL1O00533 1208 aa13.34□□□□□ -0.27
APTX-204ENST00000379817 CENPQQ7L2Z9 268 aaPredicted RBP13.34□□□□□ -0.27
APTX-204ENST00000379817 KIF16BQ96L93 1317 aa13.34□□□□□ -0.27
APTX-204ENST00000379817 DZIP1LQ8IYY4 767 aaKnown RBP13.33□□□□□ -0.28
APTX-204ENST00000379817 ZNF335Q9H4Z2 1342 aaPredicted RBP13.33□□□□□ -0.28
APTX-204ENST00000379817 TWISTNBQ3B726 338 aaPredicted RBP13.33□□□□□ -0.28
APTX-204ENST00000379817 ATF7IPQ6VMQ6 1270 aa13.33□□□□□ -0.28
APTX-204ENST00000379817 FTSJ3Q8IY81 847 aaKnown RBP13.33□□□□□ -0.28
APTX-204ENST00000379817 CLUAP1Q96AJ1 413 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms